RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 AADACP22760 399 aa17.5■□□□□ 0.39
TPM1-208ENST00000404484 NFYAP23511 347 aaPredicted RBP17.5■□□□□ 0.39
TPM1-208ENST00000404484 TGIF2LYQ8IUE0 185 aa17.5■□□□□ 0.39
TPM1-208ENST00000404484 MUC20Q8N307 709 aaPredicted RBP17.5■□□□□ 0.39
TPM1-208ENST00000404484 NEU4Q8WWR8 484 aaPredicted RBP17.5■□□□□ 0.39
TPM1-208ENST00000404484 KIRREL1Q96J84 757 aa17.5■□□□□ 0.39
TPM1-208ENST00000404484 ST6GAL2Q96JF0 529 aa17.5■□□□□ 0.39
TPM1-208ENST00000404484 GAFA1Q96PS6 74 aa17.5■□□□□ 0.39
TPM1-208ENST00000404484 TMPRSS13Q9BYE2 586 aa17.5■□□□□ 0.39
TPM1-208ENST00000404484 RAB9BQ9NP90 201 aa17.5■□□□□ 0.39
TPM1-208ENST00000404484 DLL4Q9NR61 685 aa17.5■□□□□ 0.39
TPM1-208ENST00000404484 SLC23A1Q9UHI7 598 aa17.5■□□□□ 0.39
TPM1-208ENST00000404484 ARID1AO14497 2285 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 IGKV1-6A0A0C4DH72 117 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 ODAMA1E959 279 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 TUSC2O75896 110 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 DANCRP0C864 163 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 ZBTB25P24278 435 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 DNASE1P24855 282 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 ERP29P30040 261 aaKnown RBP17.49■□□□□ 0.39
TPM1-208ENST00000404484 FXYD4P59646 89 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 CD83Q01151 205 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 DHODHQ02127 395 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 BAMBIQ13145 260 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 EDDM3AQ14507 147 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 SPICQ8N5J4 248 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 ADAD2Q8NCV1 583 aaKnown RBP17.49■□□□□ 0.39
TPM1-208ENST00000404484 ZNRF1Q8ND25 227 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 OR52B4Q8NGK2 314 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 TOMM40LQ969M1 308 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 ZNF486Q96H40 463 aaPredicted RBP17.49■□□□□ 0.39
TPM1-208ENST00000404484 RTBDNQ9BSG5 229 aaPredicted RBP17.49■□□□□ 0.39
TPM1-208ENST00000404484 TRAF4Q9BUZ4 470 aaPredicted RBP17.49■□□□□ 0.39
TPM1-208ENST00000404484 UBTD1Q9HAC8 227 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 DCAF16Q9NXF7 216 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 OR6C3Q9NZP0 311 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 CELSR1Q9NYQ6 3014 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 NDUFA2O43678 99 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 ZNF205O95201 554 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 FSTL3O95633 263 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 RBMXP38159 391 aaKnown RBP17.49■□□□□ 0.39
TPM1-208ENST00000404484 GLIPR1P48060 266 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 P2RX3P56373 397 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 MRPS11P82912 194 aaKnown RBP17.49■□□□□ 0.39
TPM1-208ENST00000404484 PPP1R1AQ13522 171 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 ABCA11PQ4W5N1 156 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 TCTE3Q8IZS6 198 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 C12orf45Q8N5I9 185 aaPredicted RBP17.49■□□□□ 0.39
TPM1-208ENST00000404484 IL1F10Q8WWZ1 152 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 GALMQ96C23 342 aa17.49■□□□□ 0.39
TPM1-208ENST00000404484 TRAV39A0A0B4J263 110 aa17.48■□□□□ 0.39
TPM1-208ENST00000404484 C9orf170A2RU37 121 aa17.48■□□□□ 0.39
TPM1-208ENST00000404484 BOLA2-SMG1P6H3BVE0 249 aa17.48■□□□□ 0.39
TPM1-208ENST00000404484 HSPA12AO43301 675 aa17.48■□□□□ 0.39
TPM1-208ENST00000404484 DSCAMO60469 2012 aa17.48■□□□□ 0.39
TPM1-208ENST00000404484 CD8AP01732 235 aa17.48■□□□□ 0.39
TPM1-208ENST00000404484 SOD3P08294 240 aa17.48■□□□□ 0.39
TPM1-208ENST00000404484 ANXA3P12429 323 aa17.48■□□□□ 0.39
TPM1-208ENST00000404484 GZMHP20718 246 aa17.48■□□□□ 0.39
TPM1-208ENST00000404484 VAMP1P23763 118 aa17.48■□□□□ 0.39
TPM1-208ENST00000404484 IL2RGP31785 369 aa17.48■□□□□ 0.39
TPM1-208ENST00000404484 CD300CQ08708 224 aa17.48■□□□□ 0.39
TPM1-208ENST00000404484 H1FOOQ8IZA3 346 aaPredicted RBP17.48■□□□□ 0.39
TPM1-208ENST00000404484 ZNF565Q8N9K5 539 aa17.48■□□□□ 0.39
TPM1-208ENST00000404484 OR11H7Q8NGC8 314 aa17.48■□□□□ 0.39
TPM1-208ENST00000404484 CCL13Q99616 98 aa17.48■□□□□ 0.39
TPM1-208ENST00000404484 PHB2Q99623 299 aa17.48■□□□□ 0.39
TPM1-208ENST00000404484 C12orf77C9JDV5 145 aa17.47■□□□□ 0.39
TPM1-208ENST00000404484 SPINT2O43291 252 aa17.47■□□□□ 0.39
TPM1-208ENST00000404484 DUS4LO95620 317 aaKnown RBP17.47■□□□□ 0.39
TPM1-208ENST00000404484 PRR18Q8N4B5 295 aa17.47■□□□□ 0.39
TPM1-208ENST00000404484 CCDC71LQ8N9Z2 235 aa17.47■□□□□ 0.39
TPM1-208ENST00000404484 OR2AK2Q8NG84 335 aa17.47■□□□□ 0.39
TPM1-208ENST00000404484 MRGPRDQ8TDS7 321 aa17.47■□□□□ 0.39
TPM1-208ENST00000404484 RANGRFQ9HD47 186 aaPredicted RBP17.47■□□□□ 0.39
TPM1-208ENST00000404484 MGAT4CQ9UBM8 478 aa17.47■□□□□ 0.39
TPM1-208ENST00000404484 OR2W1Q9Y3N9 320 aa17.47■□□□□ 0.39
TPM1-208ENST00000404484 USF3Q68DE3 2245 aa17.47■□□□□ 0.39
TPM1-208ENST00000404484 A8MV72 311 aaPredicted RBP17.46■□□□□ 0.39
TPM1-208ENST00000404484 TMPRSS2O15393 492 aa17.46■□□□□ 0.39
TPM1-208ENST00000404484 PI3P19957 117 aa17.46■□□□□ 0.39
TPM1-208ENST00000404484 CD34P28906 385 aa17.46■□□□□ 0.39
TPM1-208ENST00000404484 EDDM3BP56851 147 aa17.46■□□□□ 0.39
TPM1-208ENST00000404484 CR1LQ2VPA4 569 aa17.46■□□□□ 0.39
TPM1-208ENST00000404484 SGPP2Q8IWX5 399 aa17.46■□□□□ 0.39
TPM1-208ENST00000404484 FAM185AQ8N0U4 392 aa17.46■□□□□ 0.39
TPM1-208ENST00000404484 MITD1Q8WV92 249 aa17.46■□□□□ 0.39
TPM1-208ENST00000404484 TMEM230Q96A57 120 aa17.46■□□□□ 0.39
TPM1-208ENST00000404484 MBD6Q96DN6 1003 aa17.46■□□□□ 0.39
TPM1-208ENST00000404484 RSRP1Q9BUV0 290 aa17.46■□□□□ 0.39
TPM1-208ENST00000404484 SFT2D2O95562 160 aa17.45■□□□□ 0.38
TPM1-208ENST00000404484 HBZP02008 142 aa17.45■□□□□ 0.38
TPM1-208ENST00000404484 OR13A1Q8NGR1 328 aa17.45■□□□□ 0.38
TPM1-208ENST00000404484 LAMP3Q9UQV4 416 aa17.45■□□□□ 0.38
TPM1-208ENST00000404484 ITPR3Q14573 2671 aa17.45■□□□□ 0.38
TPM1-208ENST00000404484 VPS13CQ709C8 3753 aa17.45■□□□□ 0.38
TPM1-208ENST00000404484 A0A0B4J2A0 478 aa17.45■□□□□ 0.38
TPM1-208ENST00000404484 S100GP29377 79 aa17.45■□□□□ 0.38
TPM1-208ENST00000404484 PIGPP57054 158 aa17.45■□□□□ 0.38
TPM1-208ENST00000404484 DEFB113Q30KQ7 82 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms