RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 MINOS1Q5TGZ0 78 aa11.14□□□□□ -0.63
VPREB1-202ENST00000403807 BAIAP2L2Q6UXY1 529 aa11.14□□□□□ -0.63
VPREB1-202ENST00000403807 PRR18Q8N4B5 295 aa11.14□□□□□ -0.63
VPREB1-202ENST00000403807 OR9G1Q8NH87 305 aa11.14□□□□□ -0.63
VPREB1-202ENST00000403807 SETD6Q8TBK2 473 aa11.14□□□□□ -0.63
VPREB1-202ENST00000403807 CREB3L1Q96BA8 519 aa11.14□□□□□ -0.63
VPREB1-202ENST00000403807 MALSU1Q96EH3 234 aa11.14□□□□□ -0.63
VPREB1-202ENST00000403807 CYYR1Q96J86 154 aa11.14□□□□□ -0.63
VPREB1-202ENST00000403807 DIABLOQ9NR28 239 aa11.14□□□□□ -0.63
VPREB1-202ENST00000403807 MINOS1-NBL1R4GNA1 71 aa11.14□□□□□ -0.63
VPREB1-202ENST00000403807 MXRA5Q9NR99 2828 aa11.14□□□□□ -0.63
VPREB1-202ENST00000403807 KIAA2026Q5HYC2 2103 aa11.14□□□□□ -0.63
VPREB1-202ENST00000403807 CUBNO60494 3623 aa11.14□□□□□ -0.63
VPREB1-202ENST00000403807 A0A0A6YYH2 397 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 FAM172BPA6NC97 362 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 A6NJ64 397 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 TRIM77I1YAP6 450 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 F2RL2O00254 374 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 SDCBPO00560 298 aaPredicted RBP11.13□□□□□ -0.63
VPREB1-202ENST00000403807 HBZP02008 142 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 HTR1DP28221 377 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 ARFRP1Q13795 201 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 ZNF880Q6PDB4 577 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 MOB1BQ7L9L4 216 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 BEND2Q8NDZ0 799 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 UBALD1Q8TB05 177 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 NDNFQ8TB73 568 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 ACOT12Q8WYK0 555 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 GALMQ96C23 342 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 S100A16Q96FQ6 103 aaKnown RBP11.13□□□□□ -0.63
VPREB1-202ENST00000403807 MEGF9Q9H1U4 602 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 DPAGT1Q9H3H5 408 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 ZMAT3Q9HA38 289 aaKnown RBP11.13□□□□□ -0.63
VPREB1-202ENST00000403807 ZNF286AQ9HBT8 521 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 C12orf4Q9NQ89 552 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 KCNK7Q9Y2U2 307 aa11.13□□□□□ -0.63
VPREB1-202ENST00000403807 J3QR06 171 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 MFNGO00587 321 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 HOXA3O43365 443 aaPredicted RBP11.12□□□□□ -0.63
VPREB1-202ENST00000403807 MELTFP08582 738 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 ZNF182P17025 639 aaPredicted RBP11.12□□□□□ -0.63
VPREB1-202ENST00000403807 TALDO1P37837 337 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 HTD2P86397 168 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 HMGN3Q15651 99 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 Q3ZCU0 254 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 UBE2NLQ5JXB2 153 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 OLFML2AQ68BL7 652 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 MZT2AQ6P582 158 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 LHFPL4Q7Z7J7 247 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 LDLRAD3Q86YD5 345 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 TMEM86BQ8N661 226 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 ZDHHC22Q8N966 263 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 OR4P4Q8NGL7 312 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 OR1L1Q8NH94 360 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 C17orf50Q8WW18 174 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 SSMEM1Q8WWF3 244 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 AP3S1Q92572 193 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 SLC25A38Q96DW6 304 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 CMTM3Q96MX0 182 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 HDHD3Q9BSH5 251 aaPredicted RBP11.12□□□□□ -0.63
VPREB1-202ENST00000403807 ABCG5Q9H222 651 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 Q9N2K0 584 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 OR2S2Q9NQN1 319 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.12□□□□□ -0.63
VPREB1-202ENST00000403807 GFOD1Q9NXC2 390 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 ZNRD1Q9P1U0 126 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 DPM3Q9P2X0 92 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 COMMD3Q9UBI1 195 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 GNG12Q9UBI6 72 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 PSG11Q9UQ72 335 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 POMT1Q9Y6A1 747 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 JMJD1CQ15652 2540 aa11.12□□□□□ -0.63
VPREB1-202ENST00000403807 TRAV18A0A075B6X5 111 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 IGHV3-43A0A0B4J1X8 118 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 BTBD17A6NE02 478 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 LEUTXA8MZ59 168 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 CLDN34H7C241 214 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 IGLV1-47P01700 117 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 IGHV3-7P01780 117 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 GSTP1P09211 210 aaKnown RBP11.11□□□□□ -0.63
VPREB1-202ENST00000403807 IGHV3-43DP0DP04 118 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 SOX6P35712 828 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 CEACAM3P40198 252 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 IER3P46695 156 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 LOXL3P58215 753 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 PITPNAQ00169 270 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 SPCS2Q15005 226 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 SLC9A3R2Q15599 337 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 SSX2Q16385 188 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 HLA-DRB5Q30154 266 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 ZNF260Q3ZCT1 412 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 HACD4Q5VWC8 232 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 SAMD12Q8N8I0 201 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 ZFAND2BQ8WV99 257 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 LEAP2Q969E1 77 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 AJUBAQ96IF1 538 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 MMP28Q9H239 520 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 ESM1Q9NQ30 184 aa11.11□□□□□ -0.63
VPREB1-202ENST00000403807 AMMECR1Q9Y4X0 333 aaPredicted RBP11.11□□□□□ -0.63
VPREB1-202ENST00000403807 CCDC160A6NGH7 325 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms