RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 TRAF3IP2O43734 574 aaPredicted RBP12.1□□□□□ -0.47
HMGA2-204ENST00000403681 PTTG1IPP53801 180 aa12.1□□□□□ -0.47
HMGA2-204ENST00000403681 EDDM3BP56851 147 aa12.1□□□□□ -0.47
HMGA2-204ENST00000403681 UBE2NP61088 152 aaKnown RBP12.1□□□□□ -0.47
HMGA2-204ENST00000403681 QRFPP83859 136 aa12.1□□□□□ -0.47
HMGA2-204ENST00000403681 PLPPR5Q32ZL2 321 aa12.1□□□□□ -0.47
HMGA2-204ENST00000403681 ZNF468Q5VIY5 522 aaPredicted RBP12.1□□□□□ -0.47
HMGA2-204ENST00000403681 MISP3Q96FF7 219 aa12.1□□□□□ -0.47
HMGA2-204ENST00000403681 UCN2Q96RP3 112 aa12.1□□□□□ -0.47
HMGA2-204ENST00000403681 RBKSQ9H477 322 aa12.1□□□□□ -0.47
HMGA2-204ENST00000403681 IGHV1OR21-1A0A087WYE8 117 aa12.1□□□□□ -0.47
HMGA2-204ENST00000403681 PSG2P11465 335 aa12.1□□□□□ -0.47
HMGA2-204ENST00000403681 ZNF17P17021 662 aa12.1□□□□□ -0.47
HMGA2-204ENST00000403681 RBM11P57052 281 aaKnown RBP12.1□□□□□ -0.47
HMGA2-204ENST00000403681 FAM89BQ8N5H3 189 aa12.1□□□□□ -0.47
HMGA2-204ENST00000403681 OR4X1Q8NH49 305 aa12.1□□□□□ -0.47
HMGA2-204ENST00000403681 FOLR3P41439 243 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 CXCL12P48061 93 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 PCP4P48539 62 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 UCP3P55916 312 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 PRDX4Q13162 271 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 JOSD1Q15040 202 aaPredicted RBP12.09□□□□□ -0.47
HMGA2-204ENST00000403681 VAMP3Q15836 100 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 VN1R17PQ8TDU5 208 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 VPS25Q9BRG1 176 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 ZNF319Q9P2F9 582 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 KIAA1324LA8MWY0 1029 aaPredicted RBP12.09□□□□□ -0.47
HMGA2-204ENST00000403681 SCTP09683 121 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 CSRP1P21291 193 aaKnown RBP12.09□□□□□ -0.47
HMGA2-204ENST00000403681 F2RP25116 425 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 Q6ZS52 159 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 TMEM147Q9BVK8 224 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 GNG12Q9UBI6 72 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 CTXND1A0A1B0GTU2 59 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 RPL36A-HNRNPH2H7BZ11 118 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 SNRPCP09234 159 aaKnown RBP12.09□□□□□ -0.47
HMGA2-204ENST00000403681 EIF3IQ13347 325 aaKnown RBP12.09□□□□□ -0.47
HMGA2-204ENST00000403681 OR5R1Q8NH85 324 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 OBP2BQ9NPH6 170 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 ZNF331Q9NQX6 463 aaPredicted RBP12.09□□□□□ -0.47
HMGA2-204ENST00000403681 KCNIP2Q9NS61 270 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 SCN5AQ14524 2016 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 KNTC1P50748 2209 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 TCF20Q9UGU0 1960 aaKnown RBP12.09□□□□□ -0.47
HMGA2-204ENST00000403681 ATXN7O15265 892 aaPredicted RBP12.09□□□□□ -0.47
HMGA2-204ENST00000403681 SPINK4O60575 86 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 GLB1P16278 677 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 DSCR4P56555 118 aaPredicted RBP12.09□□□□□ -0.47
HMGA2-204ENST00000403681 ZNF784Q8NCA9 323 aaPredicted RBP12.09□□□□□ -0.47
HMGA2-204ENST00000403681 OR10S1Q8NGN2 331 aa12.09□□□□□ -0.47
HMGA2-204ENST00000403681 RNF166Q96A37 237 aaPredicted RBP12.09□□□□□ -0.47
HMGA2-204ENST00000403681 BCAT2O15382 392 aaPredicted RBP12.08□□□□□ -0.48
HMGA2-204ENST00000403681 TCF21O43680 179 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 GABRA2P47869 451 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 OR3A1P47881 315 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 ERVFC1-1P60608 527 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 PRAMEF5Q5TYX0 476 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 PRAMEF6Q5VXH4 476 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 KMT5CQ86Y97 462 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 SGMS2Q8NHU3 365 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 RFNGQ9Y644 331 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 CRYAAP02489 173 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 SPINK2P20155 84 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 IZUMO4Q1ZYL8 232 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 SNAI3Q3KNW1 292 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 TIGITQ495A1 244 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 OR5AU1Q8NGC0 362 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.08□□□□□ -0.48
HMGA2-204ENST00000403681 MTCH1Q9NZJ7 389 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 NAT8BQ9UHF3 227 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 ANAPC1Q9H1A4 1944 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 PLXNB3Q9ULL4 1909 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 GRPP07492 148 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 AMTP48728 403 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 COTL1Q14019 142 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 SMOC1Q9H4F8 434 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 OR2W1Q9Y3N9 320 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 HS3ST3B1Q9Y662 390 aa12.08□□□□□ -0.48
HMGA2-204ENST00000403681 BCL3P20749 454 aa12.07□□□□□ -0.48
HMGA2-204ENST00000403681 ZXDAP98168 799 aa12.07□□□□□ -0.48
HMGA2-204ENST00000403681 ATP6V1FQ16864 119 aa12.07□□□□□ -0.48
HMGA2-204ENST00000403681 C1orf53Q5VUE5 145 aa12.07□□□□□ -0.48
HMGA2-204ENST00000403681 OR2M3Q8NG83 312 aa12.07□□□□□ -0.48
HMGA2-204ENST00000403681 SDF2L1Q9HCN8 221 aa12.07□□□□□ -0.48
HMGA2-204ENST00000403681 SNRNP200O75643 2136 aaKnown RBP12.07□□□□□ -0.48
HMGA2-204ENST00000403681 AQP7O14520 342 aa12.07□□□□□ -0.48
HMGA2-204ENST00000403681 CBR3O75828 277 aa12.07□□□□□ -0.48
HMGA2-204ENST00000403681 CEACAM6P40199 344 aa12.07□□□□□ -0.48
HMGA2-204ENST00000403681 CISD2Q8N5K1 135 aaKnown RBP12.07□□□□□ -0.48
HMGA2-204ENST00000403681 OR10G8Q8NGN5 311 aa12.07□□□□□ -0.48
HMGA2-204ENST00000403681 POC1BQ8TC44 478 aa12.07□□□□□ -0.48
HMGA2-204ENST00000403681 EDARADDQ8WWZ3 215 aa12.07□□□□□ -0.48
HMGA2-204ENST00000403681 GPR146Q96CH1 333 aa12.07□□□□□ -0.48
HMGA2-204ENST00000403681 RCC1LQ96I51 464 aaKnown RBP12.07□□□□□ -0.48
HMGA2-204ENST00000403681 OR4C12Q96R67 309 aa12.07□□□□□ -0.48
HMGA2-204ENST00000403681 RASL10BQ96S79 203 aa12.07□□□□□ -0.48
HMGA2-204ENST00000403681 SLC35D1Q9NTN3 355 aa12.07□□□□□ -0.48
HMGA2-204ENST00000403681 CBY3A6NI87 242 aa12.07□□□□□ -0.48
HMGA2-204ENST00000403681 LRRC3CA6NJW4 275 aa12.07□□□□□ -0.48
HMGA2-204ENST00000403681 HERPUD1Q15011 391 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms