RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 TOMM20LQ6UXN7 152 aa15.79■□□□□ 0.12
COL18A1-204ENST00000400337 PRNDQ9UKY0 176 aa15.79■□□□□ 0.12
COL18A1-204ENST00000400337 NPTNQ9Y639 398 aa15.79■□□□□ 0.12
COL18A1-204ENST00000400337 TIAF1O95411 115 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 IGSF11Q5DX21 431 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 CDCP2Q5VXM1 449 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 OR4P4Q8NGL7 312 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 CLN8Q9UBY8 286 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 RPL31P62899 125 aaKnown RBP15.78■□□□□ 0.12
COL18A1-204ENST00000400337 RNF151Q2KHN1 245 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 TMEM167BQ9NRX6 74 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 C11orf94C9JXX5 98 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 F2RL2O00254 374 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 APELAP0DMC3 54 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 LGALS7P47929 136 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 PSG5Q15238 335 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 BSXQ3C1V8 233 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 PDPNQ86YL7 162 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 C11orf42Q8N5U0 333 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 HEXA-AS1Q9H8Q6 139 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 SP9P0CG40 484 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 IGLV3-21P80748 117 aaPredicted RBP15.78■□□□□ 0.12
COL18A1-204ENST00000400337 AWAT1Q58HT5 328 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 SPSB2Q99619 263 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 MANBALQ9NQG1 85 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 SLC25A10Q9UBX3 287 aaPredicted RBP15.78■□□□□ 0.12
COL18A1-204ENST00000400337 MYOFQ9NZM1 2061 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 PTPRFP10586 1907 aa15.78■□□□□ 0.12
COL18A1-204ENST00000400337 CLDN14O95500 239 aa15.77■□□□□ 0.12
COL18A1-204ENST00000400337 REG1BP48304 166 aa15.77■□□□□ 0.12
COL18A1-204ENST00000400337 FGF12P61328 243 aa15.77■□□□□ 0.12
COL18A1-204ENST00000400337 P2RY6Q15077 328 aa15.77■□□□□ 0.12
COL18A1-204ENST00000400337 PCOLCEQ15113 449 aa15.77■□□□□ 0.12
COL18A1-204ENST00000400337 CEBPEQ15744 281 aa15.77■□□□□ 0.12
COL18A1-204ENST00000400337 RNASEKQ6P5S7 137 aaKnown RBP15.77■□□□□ 0.12
COL18A1-204ENST00000400337 VAMP8Q9BV40 100 aa15.77■□□□□ 0.12
COL18A1-204ENST00000400337 PPIAL4EA0A075B759 164 aa15.77■□□□□ 0.12
COL18A1-204ENST00000400337 PPIAL4DF5H284 164 aa15.77■□□□□ 0.12
COL18A1-204ENST00000400337 KCNAB3O43448 404 aa15.77■□□□□ 0.12
COL18A1-204ENST00000400337 GNG7O60262 68 aa15.77■□□□□ 0.12
COL18A1-204ENST00000400337 ARG1P05089 322 aa15.77■□□□□ 0.12
COL18A1-204ENST00000400337 PPIAL4FP0DN26 164 aa15.77■□□□□ 0.12
COL18A1-204ENST00000400337 RANP62826 216 aaKnown RBP15.77■□□□□ 0.12
COL18A1-204ENST00000400337 CD200R1LQ6Q8B3 271 aa15.77■□□□□ 0.12
COL18A1-204ENST00000400337 GRAMD2BQ96HH9 432 aa15.77■□□□□ 0.12
COL18A1-204ENST00000400337 PPIAL4AQ9Y536 164 aa15.77■□□□□ 0.12
COL18A1-204ENST00000400337 ISG15P05161 165 aa15.77■□□□□ 0.12
COL18A1-204ENST00000400337 VAX1Q5SQQ9 334 aa15.77■□□□□ 0.12
COL18A1-204ENST00000400337 PARD6AQ9NPB6 346 aa15.77■□□□□ 0.12
COL18A1-204ENST00000400337 PTTG1IPP53801 180 aa15.77■□□□□ 0.11
COL18A1-204ENST00000400337 ERVS71-1P61550 626 aa15.77■□□□□ 0.11
COL18A1-204ENST00000400337 RPEL1Q2QD12 228 aa15.77■□□□□ 0.11
COL18A1-204ENST00000400337 TEX30Q5JUR7 227 aa15.77■□□□□ 0.11
COL18A1-204ENST00000400337 NHLRC2Q8NBF2 726 aa15.77■□□□□ 0.11
COL18A1-204ENST00000400337 ZNF519Q8TB69 540 aa15.77■□□□□ 0.11
COL18A1-204ENST00000400337 NAT8Q9UHE5 227 aa15.77■□□□□ 0.11
COL18A1-204ENST00000400337 SH2D7A6NKC9 451 aaPredicted RBP15.77■□□□□ 0.11
COL18A1-204ENST00000400337 VAMP3Q15836 100 aa15.77■□□□□ 0.11
COL18A1-204ENST00000400337 RNF2Q99496 336 aa15.77■□□□□ 0.11
COL18A1-204ENST00000400337 RBBP6Q7Z6E9 1792 aaKnown RBP15.76■□□□□ 0.11
COL18A1-204ENST00000400337 TDRD6O60522 2096 aaKnown RBP15.76■□□□□ 0.11
COL18A1-204ENST00000400337 PRR33A8MZF0 331 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 DCAF12L2Q5VW00 463 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 ICE1Q9Y2F5 2266 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 PIN1P1O15428 100 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 DAOP14920 347 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 ZNF250P15622 560 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 CAMPP49913 170 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 SNAI3Q3KNW1 292 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 RGPD3A6NKT7 1758 aaPredicted RBP15.76■□□□□ 0.11
COL18A1-204ENST00000400337 SRP14P37108 136 aaKnown RBP15.76■□□□□ 0.11
COL18A1-204ENST00000400337 TMEM65Q6PI78 240 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 SLC25A38Q96DW6 304 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 RASL11BQ9BPW5 248 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 NAGKQ9UJ70 344 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 TNFSF18Q9UNG2 199 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 WNK3Q9BYP7 1800 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 DUXBA0A1W2PPF3 345 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 IGKV3-11P04433 115 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 ATP1A1-AS1Q5TC04 95 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 ISOC2Q96AB3 205 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 CCL13Q99616 98 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 IL17BQ9UHF5 180 aa15.76■□□□□ 0.11
COL18A1-204ENST00000400337 ZDBF2Q9HCK1 2354 aa15.75■□□□□ 0.11
COL18A1-204ENST00000400337 GREB1LQ9C091 1923 aaPredicted RBP15.75■□□□□ 0.11
COL18A1-204ENST00000400337 IQCJQ1A5X6 159 aa15.75■□□□□ 0.11
COL18A1-204ENST00000400337 TMUB1Q9BVT8 246 aa15.75■□□□□ 0.11
COL18A1-204ENST00000400337 C1RLQ9NZP8 487 aa15.75■□□□□ 0.11
COL18A1-204ENST00000400337 AHRRA9YTQ3 701 aa15.75■□□□□ 0.11
COL18A1-204ENST00000400337 NPY1RP25929 384 aa15.75■□□□□ 0.11
COL18A1-204ENST00000400337 OR2V2Q96R30 315 aa15.75■□□□□ 0.11
COL18A1-204ENST00000400337 FAM206AQ9NX38 181 aa15.75■□□□□ 0.11
COL18A1-204ENST00000400337 PNRC1Q12796 327 aaPredicted RBP15.75■□□□□ 0.11
COL18A1-204ENST00000400337 LAIR2Q6ISS4 152 aa15.75■□□□□ 0.11
COL18A1-204ENST00000400337 ZNF826PQ6ZT77 177 aa15.75■□□□□ 0.11
COL18A1-204ENST00000400337 FAM181AQ8N9Y4 354 aa15.75■□□□□ 0.11
COL18A1-204ENST00000400337 SRXN1Q9BYN0 137 aa15.75■□□□□ 0.11
COL18A1-204ENST00000400337 TRBV5-7A0A0A0MS05 114 aa15.74■□□□□ 0.11
COL18A1-204ENST00000400337 SCTP09683 121 aa15.74■□□□□ 0.11
COL18A1-204ENST00000400337 SPTBP11277 2137 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms