RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 C17orf50Q8WW18 174 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 MAFIPQ8WZ33 124 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 GCDHQ92947 438 aaPredicted RBP10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 ARL11Q969Q4 196 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 SUCNR1Q9BXA5 334 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 BEX2Q9BXY8 128 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 TMEM133Q9H2Q1 129 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 TAF9BQ9HBM6 251 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 ZNF286AQ9HBT8 521 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 IDI2-AS1Q9NZ38 188 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 ZNRD1Q9P1U0 126 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 NUP50Q9UKX7 468 aa10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 NIPBLQ6KC79 2804 aaeCLIP10.11□□□□□ -0.79
HLA-DQB1-203ENST00000399082 A0A087X0M5 115 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 IGHV2-26A0A0B4J1V2 119 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 IGKV1-6A0A0C4DH72 117 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 A0A1B0GX30 115 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 CD3GP09693 182 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 HNF1AP20823 631 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 EPHA1P21709 976 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 CD34P28906 385 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 SRP14P37108 136 aaKnown RBP10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 UBE2E1P51965 193 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 HLA-DRB3P79483 266 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 GUCA2AQ02747 115 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 GNMTQ14749 295 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 LTC4SQ16873 150 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 CHRFAM7AQ494W8 412 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 C6orf183Q5T699 404 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 GPR157Q5UAW9 335 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 NCR3LG1Q68D85 454 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 MZT2AQ6P582 158 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 C9orf139Q6ZV77 190 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 ZNF554Q86TJ5 538 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 OR11H6Q8NGC7 330 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 MCFD2Q8NI22 146 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 C22orf15Q8WYQ4 148 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 LEAP2Q969E1 77 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 S100A16Q96FQ6 103 aaKnown RBP10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 ZNF48Q96MX3 618 aaPredicted RBP10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 RIMS4Q9H426 269 aaPredicted RBP10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 CHMP1AQ9HD42 196 aaPredicted RBP10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 DIABLOQ9NR28 239 aa10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 ZNF230Q9UIE0 474 aaPredicted RBP10.1□□□□□ -0.79
HLA-DQB1-203ENST00000399082 IGHV3-43A0A0B4J1X8 118 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 MDFIC2A0A1B0GVS7 189 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 hCG_1809904A0A1W2PP81 198 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 A0A1W2PPE2 198 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 A0A1W2PR64 198 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 A0A1W2PRV1 198 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 NPFFO15130 113 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 IGHV3-7P01780 117 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 SCTP09683 121 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 IGHV3-43DP0DP04 118 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 SRD5A1P18405 259 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 DTYMKP23919 212 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 FPR2P25090 351 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 MNDAP41218 407 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 ARFRP1Q13795 201 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 HERPUD1Q15011 391 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 ARL6IP1Q15041 203 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 PNLIPRP3Q17RR3 467 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 TMEM69Q5SWH9 247 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 ZNF626Q68DY1 528 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 TRAT1Q6PIZ9 186 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 MOB1BQ7L9L4 216 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 PRR18Q8N4B5 295 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 OR10A7Q8NGE5 316 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 C6orf62Q9GZU0 229 aaPredicted RBP10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 GFOD1Q9NXC2 390 aa10.09□□□□□ -0.79
HLA-DQB1-203ENST00000399082 A0A0U1RQK1 487 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 MEIOCA2RUB1 952 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 POM121CA8CG34 1229 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 FAM25AB3EWG3 89 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 FAM25CB3EWG5 89 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 FAM25GB3EWG6 89 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 SLC31A2O15432 143 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 RGS5O15539 181 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 IGLV1-47P01700 117 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 FAM157CP0CG43 387 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 NFYBP25208 207 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 SAA4P35542 130 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 CNIH2Q6PI25 160 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 Q6ZS49 121 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 LHFPL4Q7Z7J7 247 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 ABHD12Q8N2K0 398 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 GVQW1Q8N7I0 195 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 ZNF439Q8NDP4 499 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 OR52L2PQ8NGH6 319 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 OR52M1Q8NGK5 317 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 OR4P4Q8NGL7 312 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 OR13D1Q8NGV5 346 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 SETD6Q8TBK2 473 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 PHF21AQ96BD5 680 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 SLC6A7Q99884 636 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 PARP12Q9H0J9 701 aaKnown RBP10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 HEXA-AS1Q9H8Q6 139 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 EXTL2Q9UBQ6 330 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 ANAPC10Q9UM13 185 aa10.08□□□□□ -0.8
HLA-DQB1-203ENST00000399082 PSG11Q9UQ72 335 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms