RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 CACNG5Q9UF02 275 aa16.63■□□□□ 0.25
COL13A1-205ENST00000398978 RPS16P62249 146 aaKnown RBP16.62■□□□□ 0.25
COL13A1-205ENST00000398978 ARL16Q0P5N6 197 aa16.62■□□□□ 0.25
COL13A1-205ENST00000398978 TRA2AQ13595 282 aaKnown RBP eCLIP16.62■□□□□ 0.25
COL13A1-205ENST00000398978 HEPN1Q6WQI6 88 aa16.62■□□□□ 0.25
COL13A1-205ENST00000398978 SMIM6P0DI80 62 aa16.62■□□□□ 0.25
COL13A1-205ENST00000398978 WNT5AP41221 380 aa16.62■□□□□ 0.25
COL13A1-205ENST00000398978 SSX7Q7RTT5 188 aa16.62■□□□□ 0.25
COL13A1-205ENST00000398978 APOBEC3DQ96AK3 386 aaPredicted RBP16.62■□□□□ 0.25
COL13A1-205ENST00000398978 ZNF665Q9H7R5 613 aa16.62■□□□□ 0.25
COL13A1-205ENST00000398978 SEBOXQ9HB31 216 aaPredicted RBP16.62■□□□□ 0.25
COL13A1-205ENST00000398978 KCNS2Q9ULS6 477 aa16.62■□□□□ 0.25
COL13A1-205ENST00000398978 KIR2DS1A0A191URI9 304 aa16.61■□□□□ 0.25
COL13A1-205ENST00000398978 SERPINA7P05543 415 aa16.61■□□□□ 0.25
COL13A1-205ENST00000398978 MDKP21741 143 aaPredicted RBP16.61■□□□□ 0.25
COL13A1-205ENST00000398978 KIR2DS4P43632 304 aa16.61■□□□□ 0.25
COL13A1-205ENST00000398978 DUSP3P51452 185 aaPredicted RBP16.61■□□□□ 0.25
COL13A1-205ENST00000398978 KIR2DS1Q14954 304 aa16.61■□□□□ 0.25
COL13A1-205ENST00000398978 TECTBQ96PL2 329 aa16.61■□□□□ 0.25
COL13A1-205ENST00000398978 ZNF703Q9H7S9 590 aaPredicted RBP16.61■□□□□ 0.25
COL13A1-205ENST00000398978 KIAA1456Q9P272 454 aa16.61■□□□□ 0.25
COL13A1-205ENST00000398978 BOKQ9UMX3 212 aaPredicted RBP16.61■□□□□ 0.25
COL13A1-205ENST00000398978 IGKV1-39P01597 117 aa16.61■□□□□ 0.25
COL13A1-205ENST00000398978 IGKV1D-39P04432 117 aa16.61■□□□□ 0.25
COL13A1-205ENST00000398978 S100A8P05109 93 aa16.61■□□□□ 0.25
COL13A1-205ENST00000398978 RAB11AP62491 216 aa16.61■□□□□ 0.25
COL13A1-205ENST00000398978 CLDND2Q8NHS1 167 aa16.61■□□□□ 0.25
COL13A1-205ENST00000398978 ATP5SQ99766 215 aa16.61■□□□□ 0.25
COL13A1-205ENST00000398978 DLL3Q9NYJ7 618 aa16.61■□□□□ 0.25
COL13A1-205ENST00000398978 HMGB3O15347 200 aaKnown RBP16.61■□□□□ 0.25
COL13A1-205ENST00000398978 WDR1O75083 606 aa16.61■□□□□ 0.25
COL13A1-205ENST00000398978 OR2B11Q5JQS5 317 aa16.61■□□□□ 0.25
COL13A1-205ENST00000398978 ZNF324BQ6AW86 544 aaPredicted RBP16.61■□□□□ 0.25
COL13A1-205ENST00000398978 YPEL4Q96NS1 127 aa16.61■□□□□ 0.25
COL13A1-205ENST00000398978 ZNF251Q9BRH9 671 aa16.61■□□□□ 0.25
COL13A1-205ENST00000398978 BOD1L1Q8NFC6 3051 aa16.6■□□□□ 0.25
COL13A1-205ENST00000398978 Q8NFD4 153 aa16.6■□□□□ 0.25
COL13A1-205ENST00000398978 APH1AQ96BI3 265 aa16.6■□□□□ 0.25
COL13A1-205ENST00000398978 POM121L2Q96KW2 1035 aa16.6■□□□□ 0.25
COL13A1-205ENST00000398978 RPRMQ9NS64 109 aa16.6■□□□□ 0.25
COL13A1-205ENST00000398978 FOXJ2Q9P0K8 574 aa16.6■□□□□ 0.25
COL13A1-205ENST00000398978 OR2W1Q9Y3N9 320 aa16.6■□□□□ 0.25
COL13A1-205ENST00000398978 TNRC6BQ9UPQ9 1833 aaKnown RBP16.6■□□□□ 0.25
COL13A1-205ENST00000398978 SVILO95425 2214 aa16.6■□□□□ 0.25
COL13A1-205ENST00000398978 H0Y980 276 aa16.6■□□□□ 0.25
COL13A1-205ENST00000398978 TFF1P04155 84 aa16.6■□□□□ 0.25
COL13A1-205ENST00000398978 SSPNQ14714 243 aa16.6■□□□□ 0.25
COL13A1-205ENST00000398978 GFI1BQ5VTD9 330 aa16.6■□□□□ 0.25
COL13A1-205ENST00000398978 FAM58AQ8N1B3 248 aa16.6■□□□□ 0.25
COL13A1-205ENST00000398978 OR5D13Q8NGL4 314 aa16.6■□□□□ 0.25
COL13A1-205ENST00000398978 SYNGR4O95473 234 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 IFNA17P01571 189 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 CEBPDP49716 269 aaPredicted RBP16.59■□□□□ 0.25
COL13A1-205ENST00000398978 ELLP55199 621 aaPredicted RBP16.59■□□□□ 0.25
COL13A1-205ENST00000398978 PLGLB1Q02325 96 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 ELOBQ15370 118 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 C4orf17Q53FE4 359 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 STX12Q86Y82 276 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 TCTEX1D2Q8WW35 142 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 OR5P3Q8WZ94 311 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 TTTY12Q9BZ98 90 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 CYB5BO43169 146 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 EIF2S3P41091 472 aaKnown RBP16.59■□□□□ 0.25
COL13A1-205ENST00000398978 ERVS71-1P61550 626 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 OR1C1Q15619 314 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 SPNS3Q6ZMD2 512 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 TMEM45BQ96B21 275 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 RNF150Q9ULK6 438 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 IFITM10A6NMD0 228 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 ANKRD30BLA7E2S9 258 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 CER1O95813 267 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 TAS2R30P59541 319 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 ABHD17BQ5VST6 288 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 EDARADDQ8WWZ3 215 aa16.59■□□□□ 0.25
COL13A1-205ENST00000398978 DEGS1O15121 323 aa16.58■□□□□ 0.24
COL13A1-205ENST00000398978 PPIHO43447 177 aaKnown RBP16.58■□□□□ 0.24
COL13A1-205ENST00000398978 LAMTOR5O43504 91 aa16.58■□□□□ 0.24
COL13A1-205ENST00000398978 CELA3BP08861 270 aa16.58■□□□□ 0.24
COL13A1-205ENST00000398978 GNPNAT1Q96EK6 184 aaPredicted RBP16.58■□□□□ 0.24
COL13A1-205ENST00000398978 NIPSNAP3BQ9BS92 247 aa16.58■□□□□ 0.24
COL13A1-205ENST00000398978 MT-CO3P00414 261 aa16.58■□□□□ 0.24
COL13A1-205ENST00000398978 S100A12P80511 92 aa16.58■□□□□ 0.24
COL13A1-205ENST00000398978 ALKBH6Q3KRA9 238 aa16.58■□□□□ 0.24
COL13A1-205ENST00000398978 BEND4Q6ZU67 534 aa16.58■□□□□ 0.24
COL13A1-205ENST00000398978 TMEM251Q8N6I4 163 aa16.58■□□□□ 0.24
COL13A1-205ENST00000398978 OR5A2Q8NGI9 324 aa16.58■□□□□ 0.24
COL13A1-205ENST00000398978 IGLV2-14P01704 120 aa16.57■□□□□ 0.24
COL13A1-205ENST00000398978 PMELP40967 661 aa16.57■□□□□ 0.24
COL13A1-205ENST00000398978 HLA-DRB3P79483 266 aa16.57■□□□□ 0.24
COL13A1-205ENST00000398978 PLP2Q04941 152 aa16.57■□□□□ 0.24
COL13A1-205ENST00000398978 FAM209BQ5JX69 171 aa16.57■□□□□ 0.24
COL13A1-205ENST00000398978 SPANXN5Q5MJ07 72 aa16.57■□□□□ 0.24
COL13A1-205ENST00000398978 Q6ZS49 121 aa16.57■□□□□ 0.24
COL13A1-205ENST00000398978 KDF1Q8NAX2 398 aaPredicted RBP16.57■□□□□ 0.24
COL13A1-205ENST00000398978 IGKV3D-15A0A087WSY6 115 aa16.57■□□□□ 0.24
COL13A1-205ENST00000398978 FAM90A10PA6NDY2 464 aa16.57■□□□□ 0.24
COL13A1-205ENST00000398978 FAM90A18PA6NE21 464 aa16.57■□□□□ 0.24
COL13A1-205ENST00000398978 FAM90A16PA6NEW6 464 aa16.57■□□□□ 0.24
COL13A1-205ENST00000398978 FAM90A20PA6NIJ5 464 aa16.57■□□□□ 0.24
COL13A1-205ENST00000398978 FAM90A8PA6NJQ4 464 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms