RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SLC25A22Q9H936 323 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 NIT2Q9NQR4 276 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 WIPI2Q9Y4P8 454 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 CRYM-AS1A6NIL9 109 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 CLDN34H7C241 214 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 DVL1O14640 695 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 S100A8P05109 93 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 PRDX2P32119 198 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 RALGAPA1Q6GYQ0 2036 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 G3V3Q6 166 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 SEC11BP0C7V7 166 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 TMEM50BP56557 158 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 NAAAQ02083 359 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 CLEC12BQ2HXU8 276 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 PHYHD1Q5SRE7 291 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 ZNF362Q5T0B9 420 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 MOB3AQ96BX8 217 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 NDFIP1Q9BT67 221 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 CTDSP1Q9GZU7 261 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 NPTNQ9Y639 398 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 A0A0G2JK05 382 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 NCBP2LA6PVI3 153 aaKnown RBP12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 MGST3O14880 152 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 FAM3AP98173 230 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 ZNF154Q13106 437 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 TMEM241Q24JQ0 296 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 LINC00470Q9BZP3 86 aa12.31□□□□□ -0.44
PCDHGA11-201ENST00000398587 ZNF320A2RRD8 509 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 RBFOX3A6NFN3 312 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 SOX15O60248 233 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 ZNF737O75373 536 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 TMEM11P17152 192 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 SEBOXQ9HB31 216 aaPredicted RBP12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 RFPL3SP0C7P2 107 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 PSG2P11465 335 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 IGSF11Q5DX21 431 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 SLC25A53Q5H9E4 307 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 SAXO1Q8IYX7 474 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 Q96M66 194 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 TREM2Q9NZC2 230 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 LYPD3O95274 346 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 CXCL2P19875 107 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 FABP9Q0Z7S8 132 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 OR2T6Q8NHC8 308 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 OPN3Q9H1Y3 402 aaPredicted RBP12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 SH2D2AQ9NP31 389 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 PIPOXQ9P0Z9 390 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 PDZD11Q5EBL8 140 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 TIMM9Q9Y5J7 89 aa12.3□□□□□ -0.44
PCDHGA11-201ENST00000398587 KIF26BQ2KJY2 2108 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 OPN1MWP04001 364 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 OPN1MW2P0DN77 364 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 OPN1MW3P0DN78 364 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 C4orf17Q53FE4 359 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 ASCL5Q7RTU5 278 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 FADS6Q8N9I5 356 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 MISP3Q96FF7 219 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 TXN2Q99757 166 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 GP6Q9HCN6 339 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 MMP24Q9Y5R2 645 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 LOC102723996A0A087X1L8 192 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 CHEK1O14757 476 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 SYNGR1O43759 233 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 ZIC3O60481 467 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 CD74P04233 296 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 ZNF250P15622 560 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 PPP1CCP36873 323 aaKnown RBP12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 TMEM255AQ5JRV8 349 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 ATP1A1-AS1Q5TC04 95 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 LINC00052Q96N35 136 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 IGKV1D-43A0A0B4J1Z2 117 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 KCNMB1Q16558 191 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 AARDQ4LEZ3 155 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 ZNF441Q8N8Z8 693 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 TMEM45BQ96B21 275 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 POM121Q96HA1 1249 aa12.29□□□□□ -0.44
PCDHGA11-201ENST00000398587 XKRY2A2RUG3 117 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 CDRT15L2A8MXV6 281 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 COL10A1Q03692 680 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 FNDC7Q5VTL7 733 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 PRR27Q6MZM9 219 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 TGIF2LYQ8IUE0 185 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 TGIF2LXQ8IUE1 241 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 TIMP4Q99727 224 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 ZNF703Q9H7S9 590 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 PRNDQ9UKY0 176 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 J3QW42 95 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 SCTP09683 121 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 ERVFC1-1P60608 527 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 RPS11P62280 158 aaKnown RBP eCLIP12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 C17orf82Q86X59 251 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 ADAMTS17Q8TE56 1095 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 MARS2Q96GW9 593 aaKnown RBP12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 RCC2Q9P258 522 aaKnown RBP12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 FNDC1Q4ZHG4 1894 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 OR2H2O95918 312 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 RBP4P02753 201 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 P2RY4P51582 365 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 CSRP2Q16527 193 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 OR8G5Q8NG78 346 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms