RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 C10orf105Q8TEF2 133 aa17.52■□□□□ 0.4
CPNE1-204ENST00000397443 PRRT1Q99946 306 aa17.52■□□□□ 0.4
CPNE1-204ENST00000397443 ITPR2Q14571 2701 aa17.52■□□□□ 0.4
CPNE1-204ENST00000397443 IGHV4-30-2A0A087WSY4 118 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 IGHV3-43A0A0B4J1X8 118 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 hADV38S2A0JD32 116 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 IGHV3-43DP0DP04 118 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 GNB2P62879 340 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 WDR25Q64LD2 544 aaPredicted RBP17.51■□□□□ 0.39
CPNE1-204ENST00000397443 TMEM200BQ69YZ2 307 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 TMEM17Q86X19 198 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 ARRDC1Q8N5I2 433 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 UPRTQ96BW1 309 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 GALMQ96C23 342 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 LURAP1Q96LR2 239 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 A0A1B0GVG6 124 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 SPINT2O43291 252 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 PAX1P15863 534 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 FXYD4P59646 89 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 DEFB113Q30KQ7 82 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 OR52L2PQ8NGH6 319 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 OR10J5Q8NHC4 309 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 CLDND2Q8NHS1 167 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 CALYQ9NYX4 217 aa17.51■□□□□ 0.39
CPNE1-204ENST00000397443 hCG_2014768A0A024R1R8 64 aa17.5■□□□□ 0.39
CPNE1-204ENST00000397443 POM121CA8CG34 1229 aa17.5■□□□□ 0.39
CPNE1-204ENST00000397443 C15orf65H3BRN8 121 aa17.5■□□□□ 0.39
CPNE1-204ENST00000397443 CCL3L1P16619 93 aa17.5■□□□□ 0.39
CPNE1-204ENST00000397443 GZMHP20718 246 aa17.5■□□□□ 0.39
CPNE1-204ENST00000397443 ERVFRD-1P60508 538 aa17.5■□□□□ 0.39
CPNE1-204ENST00000397443 BAMBIQ13145 260 aa17.5■□□□□ 0.39
CPNE1-204ENST00000397443 RBMS2Q15434 407 aaKnown RBP17.5■□□□□ 0.39
CPNE1-204ENST00000397443 DUSP18Q8NEJ0 188 aa17.5■□□□□ 0.39
CPNE1-204ENST00000397443 OR10V1Q8NGI7 309 aa17.5■□□□□ 0.39
CPNE1-204ENST00000397443 OR13C8Q8NGS7 320 aa17.5■□□□□ 0.39
CPNE1-204ENST00000397443 BEX2Q9BXY8 128 aa17.5■□□□□ 0.39
CPNE1-204ENST00000397443 BEX1Q9HBH7 125 aa17.5■□□□□ 0.39
CPNE1-204ENST00000397443 GNMTQ14749 295 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 CLEC12BQ2HXU8 276 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 ESCO2Q56NI9 601 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 TERB2Q8NHR7 220 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 TOMM40LQ969M1 308 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 MRGPRFQ96AM1 343 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 CABLES2Q9BTV7 478 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 SSBP3Q9BWW4 388 aaPredicted RBP17.49■□□□□ 0.39
CPNE1-204ENST00000397443 C20orf85Q9H1P6 137 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 LINC00312Q9Y6C7 94 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 OR5H14A6NHG9 310 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 ARPC1BO15143 372 aaKnown RBP17.49■□□□□ 0.39
CPNE1-204ENST00000397443 NDUFB6O95139 128 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 IGHV3-7P01780 117 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 IGHV2-5P01817 119 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 RLN1P04808 185 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 AADACP22760 399 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 C17orf58Q2M2W7 97 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 TRAT1Q6PIZ9 186 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 MINDY2Q8NBR6 621 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 MARCH1Q8TCQ1 289 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 CREB3L1Q96BA8 519 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 OR2S2Q9NQN1 319 aa17.49■□□□□ 0.39
CPNE1-204ENST00000397443 BEX4Q9NWD9 120 aaPredicted RBP17.49■□□□□ 0.39
CPNE1-204ENST00000397443 CCDC168Q8NDH2 2452 aa17.48■□□□□ 0.39
CPNE1-204ENST00000397443 TRBV6-7A0A0A0MS04 114 aa17.48■□□□□ 0.39
CPNE1-204ENST00000397443 FAM172BPA6NC97 362 aa17.48■□□□□ 0.39
CPNE1-204ENST00000397443 F5H0A9 414 aaPredicted RBP17.48■□□□□ 0.39
CPNE1-204ENST00000397443 CTXN2P0C2S0 81 aa17.48■□□□□ 0.39
CPNE1-204ENST00000397443 PPP1CCP36873 323 aaKnown RBP17.48■□□□□ 0.39
CPNE1-204ENST00000397443 CEACAM6P40199 344 aa17.48■□□□□ 0.39
CPNE1-204ENST00000397443 MEF2CQ06413 473 aaPredicted RBP17.48■□□□□ 0.39
CPNE1-204ENST00000397443 AADACL3Q5VUY0 350 aa17.48■□□□□ 0.39
CPNE1-204ENST00000397443 ZNF660Q6AZW8 331 aaPredicted RBP17.48■□□□□ 0.39
CPNE1-204ENST00000397443 PARP12Q9H0J9 701 aaKnown RBP17.48■□□□□ 0.39
CPNE1-204ENST00000397443 NCOR1P1Q9H4R4 102 aa17.48■□□□□ 0.39
CPNE1-204ENST00000397443 SLC2A8Q9NY64 477 aa17.48■□□□□ 0.39
CPNE1-204ENST00000397443 COPZ2Q9P299 210 aa17.48■□□□□ 0.39
CPNE1-204ENST00000397443 IGHV4-61A0A0C4DH41 118 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 KBTBD11-OT1A0A1B0GTJ5 212 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 NDUFS8O00217 210 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 PRAMEF5Q5TYX0 476 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 DHRS11Q6UWP2 260 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 ZNF714Q96N38 554 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 ZNF69Q9UC07 566 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 NUBP2Q9Y5Y2 271 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 WNK2Q9Y3S1 2297 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 C22orf46C9J442 243 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 MMP23AO75900 390 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 CGB3P0DN86 165 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 CGB7P0DN87 165 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 PI3P19957 117 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 ZBTB25P24278 435 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 NFYBP25208 207 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 CR1LQ2VPA4 569 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 TMED4Q7Z7H5 227 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 NINJ1Q92982 152 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 RDH8Q9NYR8 311 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 GNG12Q9UBI6 72 aa17.47■□□□□ 0.39
CPNE1-204ENST00000397443 UBE2J1Q9Y385 318 aaPredicted RBP17.47■□□□□ 0.39
CPNE1-204ENST00000397443 PPYP01298 95 aa17.46■□□□□ 0.39
CPNE1-204ENST00000397443 H2AFB2P0C5Z0 115 aa17.46■□□□□ 0.39
CPNE1-204ENST00000397443 PGAM2P15259 253 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms