RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 PRO1933Q9H354 126 aa11.86□□□□□ -0.51
NUP98-204ENST00000397004 IGKV1-5P01602 117 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 MLF1P58340 268 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 VAMP2P63027 116 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 HNF4GQ14541 408 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 AKR1C8PQ5T2L2 129 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 FAM53AQ6NSI3 398 aaPredicted RBP11.85□□□□□ -0.51
NUP98-204ENST00000397004 OR5D13Q8NGL4 314 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 OR1K1Q8NGR3 316 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 UBALD1Q8TB05 177 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 FAM210BQ96KR6 192 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 HIST1H2BLQ99880 126 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 FAM186AA6NE01 2351 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 TRAV1-1A0A0B4J248 108 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 TK1P04183 234 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 F2RP25116 425 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 FGF12P61328 243 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 PRDX4Q13162 271 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 HLA-BQ31612 363 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 RPS19BP1Q86WX3 136 aaKnown RBP11.85□□□□□ -0.51
NUP98-204ENST00000397004 FAM185AQ8N0U4 392 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 AGBL5Q8NDL9 886 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 GNPNAT1Q96EK6 184 aaPredicted RBP11.85□□□□□ -0.51
NUP98-204ENST00000397004 SNX22Q96L94 193 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 GTF3C1Q12789 2109 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 TRAV24A0A0B4J272 114 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 A0A1B0GV90 55 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 GZMHP20718 246 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 ATP23Q9Y6H3 246 aa11.85□□□□□ -0.51
NUP98-204ENST00000397004 TRIOBPQ9H2D6 2365 aa11.84□□□□□ -0.51
NUP98-204ENST00000397004 DOCK10Q96BY6 2186 aa11.84□□□□□ -0.51
NUP98-204ENST00000397004 TNRC6AQ8NDV7 1962 aaKnown RBP11.84□□□□□ -0.51
NUP98-204ENST00000397004 METTL15P1P0C7V9 234 aa11.84□□□□□ -0.51
NUP98-204ENST00000397004 CCNOP22674 350 aa11.84□□□□□ -0.51
NUP98-204ENST00000397004 BAXQ07812 192 aa11.84□□□□□ -0.51
NUP98-204ENST00000397004 WDR25Q64LD2 544 aaPredicted RBP11.84□□□□□ -0.51
NUP98-204ENST00000397004 RCC1LQ96I51 464 aaKnown RBP11.84□□□□□ -0.51
NUP98-204ENST00000397004 SDF2L1Q9HCN8 221 aa11.84□□□□□ -0.51
NUP98-204ENST00000397004 SIRT7Q9NRC8 400 aa11.84□□□□□ -0.51
NUP98-204ENST00000397004 H0Y980 276 aa11.84□□□□□ -0.51
NUP98-204ENST00000397004 HSPA12AO43301 675 aa11.84□□□□□ -0.51
NUP98-204ENST00000397004 IAPPP10997 89 aa11.84□□□□□ -0.51
NUP98-204ENST00000397004 SRPXP78539 464 aa11.84□□□□□ -0.51
NUP98-204ENST00000397004 WDR54Q9H977 334 aa11.84□□□□□ -0.51
NUP98-204ENST00000397004 OR5H1A6NKK0 313 aa11.84□□□□□ -0.51
NUP98-204ENST00000397004 BCL2P10415 239 aa11.84□□□□□ -0.51
NUP98-204ENST00000397004 FGF5P12034 268 aa11.84□□□□□ -0.51
NUP98-204ENST00000397004 ZNF585BQ52M93 769 aa11.84□□□□□ -0.51
NUP98-204ENST00000397004 WDR5BQ86VZ2 330 aa11.84□□□□□ -0.51
NUP98-204ENST00000397004 ZNF525Q8N782 197 aa11.84□□□□□ -0.51
NUP98-204ENST00000397004 IFNL4K9M1U5 179 aa11.83□□□□□ -0.52
NUP98-204ENST00000397004 HS3ST1O14792 307 aa11.83□□□□□ -0.52
NUP98-204ENST00000397004 YKT6O15498 198 aa11.83□□□□□ -0.52
NUP98-204ENST00000397004 PAX1P15863 534 aa11.83□□□□□ -0.52
NUP98-204ENST00000397004 IL24Q13007 206 aa11.83□□□□□ -0.52
NUP98-204ENST00000397004 RBMXL1Q96E39 390 aaKnown RBP11.83□□□□□ -0.52
NUP98-204ENST00000397004 MEGF10Q96KG7 1140 aa11.83□□□□□ -0.52
NUP98-204ENST00000397004 MRPS17Q9Y2R5 130 aaKnown RBP11.83□□□□□ -0.52
NUP98-204ENST00000397004 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
NUP98-204ENST00000397004 S100A2P29034 98 aa11.83□□□□□ -0.52
NUP98-204ENST00000397004 HOXA4Q00056 320 aaPredicted RBP11.83□□□□□ -0.52
NUP98-204ENST00000397004 OR10G4Q8NGN3 311 aa11.83□□□□□ -0.52
NUP98-204ENST00000397004 ABHD14BQ96IU4 210 aa11.83□□□□□ -0.52
NUP98-204ENST00000397004 PRDM14Q9GZV8 571 aa11.83□□□□□ -0.52
NUP98-204ENST00000397004 RBKSQ9H477 322 aa11.83□□□□□ -0.52
NUP98-204ENST00000397004 CDH20Q9HBT6 801 aa11.83□□□□□ -0.52
NUP98-204ENST00000397004 RHBDL1O75783 438 aa11.83□□□□□ -0.52
NUP98-204ENST00000397004 IL2RGP31785 369 aa11.83□□□□□ -0.52
NUP98-204ENST00000397004 CD81P60033 236 aa11.83□□□□□ -0.52
NUP98-204ENST00000397004 GATAD1Q8WUU5 269 aa11.83□□□□□ -0.52
NUP98-204ENST00000397004 RDH5Q92781 318 aa11.83□□□□□ -0.52
NUP98-204ENST00000397004 CISD1Q9NZ45 108 aaKnown RBP11.83□□□□□ -0.52
NUP98-204ENST00000397004 ERRFI1Q9UJM3 462 aaPredicted RBP11.83□□□□□ -0.52
NUP98-204ENST00000397004 PPP1R2P9O14990 202 aa11.82□□□□□ -0.52
NUP98-204ENST00000397004 IL18BPO95998 194 aa11.82□□□□□ -0.52
NUP98-204ENST00000397004 DEFA4P12838 97 aa11.82□□□□□ -0.52
NUP98-204ENST00000397004 TLE4Q04727 773 aa11.82□□□□□ -0.52
NUP98-204ENST00000397004 FOXO1Q12778 655 aa11.82□□□□□ -0.52
NUP98-204ENST00000397004 TESK1Q15569 626 aa11.82□□□□□ -0.52
NUP98-204ENST00000397004 OR4X1Q8NH49 305 aa11.82□□□□□ -0.52
NUP98-204ENST00000397004 OR2V1Q8NHB1 315 aa11.82□□□□□ -0.52
NUP98-204ENST00000397004 SPIN2AQ99865 258 aa11.82□□□□□ -0.52
NUP98-204ENST00000397004 SPIN2BQ9BPZ2 258 aa11.82□□□□□ -0.52
NUP98-204ENST00000397004 UNKLQ9H9P5 680 aaKnown RBP11.82□□□□□ -0.52
NUP98-204ENST00000397004 A0A1W2PR80 420 aa11.82□□□□□ -0.52
NUP98-204ENST00000397004 HMGB3O15347 200 aaKnown RBP11.82□□□□□ -0.52
NUP98-204ENST00000397004 SRSF7Q16629 238 aaKnown RBP eCLIP11.82□□□□□ -0.52
NUP98-204ENST00000397004 SPEM1Q8N4L4 309 aa11.82□□□□□ -0.52
NUP98-204ENST00000397004 RPP25LQ8N5L8 163 aaKnown RBP11.82□□□□□ -0.52
NUP98-204ENST00000397004 CACNG5Q9UF02 275 aa11.82□□□□□ -0.52
NUP98-204ENST00000397004 DCHS1Q96JQ0 3298 aa11.82□□□□□ -0.52
NUP98-204ENST00000397004 SS18L1O75177 396 aaPredicted RBP11.82□□□□□ -0.52
NUP98-204ENST00000397004 CELA3AP09093 270 aa11.82□□□□□ -0.52
NUP98-204ENST00000397004 ZDHHC23Q8IYP9 409 aa11.82□□□□□ -0.52
NUP98-204ENST00000397004 MBD3L1Q8WWY6 194 aa11.82□□□□□ -0.52
NUP98-204ENST00000397004 C5orf49A4QMS7 147 aa11.81□□□□□ -0.52
NUP98-204ENST00000397004 SELLP14151 372 aa11.81□□□□□ -0.52
NUP98-204ENST00000397004 RIPPLY2Q5TAB7 128 aa11.81□□□□□ -0.52
NUP98-204ENST00000397004 ZNF787Q6DD87 383 aa11.81□□□□□ -0.52
NUP98-204ENST00000397004 H1FOOQ8IZA3 346 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms