RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 TNFSF18Q9UNG2 199 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 MIA3Q5JRA6 1907 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 FAM24AA6NFZ4 105 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 C3orf80F5H4A9 247 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 PCSK4Q6UW60 755 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 OR2I1PQ8NGU4 316 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 IGKV3-11P04433 115 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 PDLIM4P50479 330 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 RPS20P60866 119 aaKnown RBP13.59□□□□□ -0.23
GNE-202ENST00000396594 UNQ9370/PRO34162Q6UXP9 181 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 SLC35E3Q7Z769 313 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 SCNM1Q9BWG6 230 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 MYO10Q9HD67 2058 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 ONECUT2O95948 504 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 ZAR1Q86SH2 424 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 RTN4RL2Q86UN3 420 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 ORAI1Q96D31 301 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 PLXNA1Q9UIW2 1896 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 SOCS1O15524 211 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 FOXH1O75593 365 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 ETFDHQ16134 617 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 LSM10Q969L4 123 aaKnown RBP13.59□□□□□ -0.23
GNE-202ENST00000396594 UCN2Q96RP3 112 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 KIR3DL2P43630 455 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 SP6Q3SY56 376 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 HIKESHIQ53FT3 197 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 C1QL3Q5VWW1 255 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 ELOVL1Q9BW60 279 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 NPVFQ9HCQ7 196 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 IDI2-AS1Q9NZ38 188 aa13.59□□□□□ -0.23
GNE-202ENST00000396594 WNT9BO14905 357 aa13.58□□□□□ -0.23
GNE-202ENST00000396594 GLI4P10075 376 aa13.58□□□□□ -0.23
GNE-202ENST00000396594 LYZP61626 148 aa13.58□□□□□ -0.23
GNE-202ENST00000396594 CFHR1Q03591 330 aa13.58□□□□□ -0.23
GNE-202ENST00000396594 TIMM23BQ5SRD1 257 aa13.58□□□□□ -0.23
GNE-202ENST00000396594 ADAMTS17Q8TE56 1095 aa13.58□□□□□ -0.23
GNE-202ENST00000396594 URGCP-MRPS24S4R325 110 aa13.58□□□□□ -0.23
GNE-202ENST00000396594 TM4SF5O14894 197 aa13.58□□□□□ -0.24
GNE-202ENST00000396594 MUC1P15941 1255 aaPredicted RBP13.58□□□□□ -0.24
GNE-202ENST00000396594 DYNLT3P51808 116 aa13.58□□□□□ -0.24
GNE-202ENST00000396594 RFESDQ8TAC1 157 aa13.58□□□□□ -0.24
GNE-202ENST00000396594 BOLA1Q9Y3E2 137 aa13.58□□□□□ -0.24
GNE-202ENST00000396594 TRBV23-1A0A0A0MS06 115 aa13.58□□□□□ -0.24
GNE-202ENST00000396594 TMEM91Q6ZNR0 172 aa13.58□□□□□ -0.24
GNE-202ENST00000396594 SCMH1Q96GD3 660 aa13.58□□□□□ -0.24
GNE-202ENST00000396594 OPN4Q9UHM6 478 aa13.58□□□□□ -0.24
GNE-202ENST00000396594 RECKO95980 971 aa13.58□□□□□ -0.24
GNE-202ENST00000396594 USF1P22415 310 aaPredicted RBP13.58□□□□□ -0.24
GNE-202ENST00000396594 COL10A1Q03692 680 aa13.58□□□□□ -0.24
GNE-202ENST00000396594 RTP5Q14D33 572 aa13.58□□□□□ -0.24
GNE-202ENST00000396594 BSXQ3C1V8 233 aa13.58□□□□□ -0.24
GNE-202ENST00000396594 LURAP1Q96LR2 239 aa13.58□□□□□ -0.24
GNE-202ENST00000396594 CLCF1Q9UBD9 225 aa13.58□□□□□ -0.24
GNE-202ENST00000396594 HIGD1AQ9Y241 93 aa13.58□□□□□ -0.24
GNE-202ENST00000396594 EWSR1Q01844 656 aaKnown RBP eCLIP13.57□□□□□ -0.24
GNE-202ENST00000396594 C16orf47Q6ZP98 133 aaPredicted RBP13.57□□□□□ -0.24
GNE-202ENST00000396594 ZNF385AQ96PM9 386 aaKnown RBP13.57□□□□□ -0.24
GNE-202ENST00000396594 DLL1O00548 723 aa13.57□□□□□ -0.24
GNE-202ENST00000396594 ISLRO14498 428 aa13.57□□□□□ -0.24
GNE-202ENST00000396594 SYNGR3O43761 229 aa13.57□□□□□ -0.24
GNE-202ENST00000396594 OR2A4O95047 310 aa13.57□□□□□ -0.24
GNE-202ENST00000396594 MPV17P39210 176 aa13.57□□□□□ -0.24
GNE-202ENST00000396594 ZNF343Q6P1L6 599 aa13.57□□□□□ -0.24
GNE-202ENST00000396594 OR10A7Q8NGE5 316 aa13.57□□□□□ -0.24
GNE-202ENST00000396594 OR2A7Q96R45 310 aa13.57□□□□□ -0.24
GNE-202ENST00000396594 OR51B2Q9Y5P1 312 aa13.57□□□□□ -0.24
GNE-202ENST00000396594 HRKO00198 91 aa13.57□□□□□ -0.24
GNE-202ENST00000396594 MFNGO00587 321 aa13.57□□□□□ -0.24
GNE-202ENST00000396594 RPL27AP46776 148 aaKnown RBP13.57□□□□□ -0.24
GNE-202ENST00000396594 RPS4XP62701 263 aaKnown RBP13.57□□□□□ -0.24
GNE-202ENST00000396594 OR10G8Q8NGN5 311 aa13.57□□□□□ -0.24
GNE-202ENST00000396594 PATE3B3GLJ2 98 aa13.57□□□□□ -0.24
GNE-202ENST00000396594 RELL2Q8NC24 303 aaPredicted RBP13.57□□□□□ -0.24
GNE-202ENST00000396594 C20orf24Q9BUV8 137 aa13.57□□□□□ -0.24
GNE-202ENST00000396594 COL4A1P02462 1669 aa13.57□□□□□ -0.24
GNE-202ENST00000396594 IGLV3-12A0A075B6K2 115 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 H3BP45 60 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 MT-ND6P03923 174 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 HTR1DP28221 377 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 Q6ZT83 130 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 LRRTM1Q86UE6 522 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 PRR7Q8TB68 274 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 MIXL1Q9H2W2 232 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 H3BMH7 237 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 UPK3AO75631 287 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 TMEM50BP56557 158 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 PRR27Q6MZM9 219 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 DNM1P46Q6ZS02 220 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 WDR31Q8NA23 367 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 SPSB2Q99619 263 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 SMOC1Q9H4F8 434 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 DEFB108AA8MXU0 73 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 J3QR06 171 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 CHST1O43916 411 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 SPNP16150 400 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 RBPMS2Q6ZRY4 209 aaKnown RBP13.56□□□□□ -0.24
GNE-202ENST00000396594 OR4D10Q8NGI6 311 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 ADAT3Q96EY9 351 aaPredicted RBP13.56□□□□□ -0.24
GNE-202ENST00000396594 NEURL2Q9BR09 285 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 OR2J1Q9GZK6 312 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms