RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 SFTPA2Q8IWL1 248 aa15.12■□□□□ 0.01
UBFD1-201ENST00000395878 TREM2Q9NZC2 230 aa15.12■□□□□ 0.01
UBFD1-201ENST00000395878 PATE3B3GLJ2 98 aa15.11■□□□□ 0.01
UBFD1-201ENST00000395878 ATP6V0CP27449 155 aa15.11■□□□□ 0.01
UBFD1-201ENST00000395878 TCL1AP56279 114 aa15.11■□□□□ 0.01
UBFD1-201ENST00000395878 RPL30P62888 115 aaKnown RBP15.11■□□□□ 0.01
UBFD1-201ENST00000395878 KHDC3LQ587J8 217 aa15.11■□□□□ 0.01
UBFD1-201ENST00000395878 ADAMTSL1Q8N6G6 1762 aa15.11■□□□□ 0.01
UBFD1-201ENST00000395878 TRAV39A0A0B4J263 110 aa15.11■□□□□ 0.01
UBFD1-201ENST00000395878 C16orf97H3BN30 126 aa15.11■□□□□ 0.01
UBFD1-201ENST00000395878 AESQ08117 197 aa15.11■□□□□ 0.01
UBFD1-201ENST00000395878 RFLNBQ8N5W9 214 aa15.11■□□□□ 0.01
UBFD1-201ENST00000395878 TMEM208Q9BTX3 173 aa15.11■□□□□ 0.01
UBFD1-201ENST00000395878 IFITM3Q01628 133 aa15.11■□□□□ 0.01
UBFD1-201ENST00000395878 ROM1Q03395 351 aa15.11■□□□□ 0.01
UBFD1-201ENST00000395878 OR5R1Q8NH85 324 aa15.11■□□□□ 0.01
UBFD1-201ENST00000395878 OR2J1Q9GZK6 312 aa15.11■□□□□ 0.01
UBFD1-201ENST00000395878 HELTA6NFD8 242 aa15.11■□□□□ 0.01
UBFD1-201ENST00000395878 COL8A1P27658 744 aa15.11■□□□□ 0.01
UBFD1-201ENST00000395878 CEACAM21Q3KPI0 293 aa15.11■□□□□ 0.01
UBFD1-201ENST00000395878 SMDT1Q9H4I9 107 aa15.11■□□□□ 0.01
UBFD1-201ENST00000395878 MSL2Q9HCI7 577 aa15.11■□□□□ 0.01
UBFD1-201ENST00000395878 SRSF10O75494 262 aaKnown RBP15.1■□□□□ 0.01
UBFD1-201ENST00000395878 DEDDO75618 318 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 NCMAPQ5T1S8 102 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 ASCL3Q9NQ33 180 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 TRAV34A0A0B4J273 112 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 PSG4Q00888 419 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 FUT5Q11128 374 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 RTP5Q14D33 572 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 HIST3H3Q16695 136 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 OR1L6Q8NGR2 347 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 FBLIM1Q8WUP2 373 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 DPF1Q92782 380 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 BET1LQ9NYM9 111 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 ELF5Q9UKW6 265 aaPredicted RBP15.1■□□□□ 0.01
UBFD1-201ENST00000395878 WIPI2Q9Y4P8 454 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 M0R143 59 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 PMS2CLQ68D20 193 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 SLC16A13Q7RTY0 426 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 SLC22A18ASQ8N1D0 253 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 MRPL30Q8TCC3 161 aaKnown RBP15.1■□□□□ 0.01
UBFD1-201ENST00000395878 KCNK7Q9Y2U2 307 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 WASHC3Q9Y3C0 194 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 UFC1Q9Y3C8 167 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 ZNF831Q5JPB2 1677 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 ORM1P02763 201 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 MESP2Q0VG99 397 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 TMEM255AQ5JRV8 349 aa15.1■□□□□ 0.01
UBFD1-201ENST00000395878 HLA-DQB1P01920 261 aa15.09■□□□□ 0.01
UBFD1-201ENST00000395878 VSIG10L2P0DP72 767 aa15.09■□□□□ 0.01
UBFD1-201ENST00000395878 MMP9P14780 707 aa15.09■□□□□ 0.01
UBFD1-201ENST00000395878 PTBP3O95758 552 aaKnown RBP15.09■□□□□ 0.01
UBFD1-201ENST00000395878 LYRM7Q5U5X0 104 aa15.09■□□□□ 0.01
UBFD1-201ENST00000395878 EIF4E3Q8N5X7 224 aaKnown RBP15.09■□□□□ 0.01
UBFD1-201ENST00000395878 TMEM116Q8NCL8 245 aa15.09■□□□□ 0.01
UBFD1-201ENST00000395878 PACRGQ96M98 296 aaPredicted RBP15.09■□□□□ 0.01
UBFD1-201ENST00000395878 NPAS1Q99742 590 aa15.09■□□□□ 0.01
UBFD1-201ENST00000395878 ADAM11O75078 769 aa15.09■□□□□ 0.01
UBFD1-201ENST00000395878 PRSS1P07477 247 aa15.09■□□□□ 0.01
UBFD1-201ENST00000395878 FDX2Q6P4F2 183 aa15.09■□□□□ 0.01
UBFD1-201ENST00000395878 DSPPQ9NZW4 1301 aa15.09■□□□□ 0.01
UBFD1-201ENST00000395878 J3QR06 171 aa15.09■□□□□ 0.01
UBFD1-201ENST00000395878 GCM2O75603 506 aaPredicted RBP15.09■□□□□ 0.01
UBFD1-201ENST00000395878 HPRT1P00492 218 aa15.09■□□□□ 0.01
UBFD1-201ENST00000395878 CSN3P07498 182 aa15.09■□□□□ 0.01
UBFD1-201ENST00000395878 PRDX2P32119 198 aa15.09■□□□□ 0.01
UBFD1-201ENST00000395878 PPP1CCP36873 323 aaKnown RBP15.09■□□□□ 0.01
UBFD1-201ENST00000395878 SRP14P37108 136 aaKnown RBP15.09■□□□□ 0.01
UBFD1-201ENST00000395878 FGF12P61328 243 aa15.09■□□□□ 0.01
UBFD1-201ENST00000395878 COL10A1Q03692 680 aa15.09■□□□□ 0.01
UBFD1-201ENST00000395878 GHITMQ9H3K2 345 aa15.09■□□□□ 0.01
UBFD1-201ENST00000395878 IL11P20809 199 aa15.08■□□□□ 0.01
UBFD1-201ENST00000395878 SERF2P84101 59 aa15.08■□□□□ 0.01
UBFD1-201ENST00000395878 TEX30Q5JUR7 227 aa15.08■□□□□ 0.01
UBFD1-201ENST00000395878 H1FOOQ8IZA3 346 aaPredicted RBP15.08■□□□□ 0.01
UBFD1-201ENST00000395878 OR8I2Q8N0Y5 310 aa15.08■□□□□ 0.01
UBFD1-201ENST00000395878 SNX22Q96L94 193 aa15.08■□□□□ 0.01
UBFD1-201ENST00000395878 GREM1O60565 184 aa15.08■□□□□ 0
UBFD1-201ENST00000395878 SMIM6P0DI80 62 aa15.08■□□□□ 0
UBFD1-201ENST00000395878 IGHV3OR15-7A0A075B7D8 119 aa15.08■□□□□ 0
UBFD1-201ENST00000395878 IGHV1-45A0A0A0MS14 117 aa15.08■□□□□ 0
UBFD1-201ENST00000395878 SMPD2O60906 423 aa15.08■□□□□ 0
UBFD1-201ENST00000395878 VWA1Q6PCB0 445 aa15.08■□□□□ 0
UBFD1-201ENST00000395878 OR1K1Q8NGR3 316 aa15.08■□□□□ 0
UBFD1-201ENST00000395878 ADAMTS17Q8TE56 1095 aa15.08■□□□□ 0
UBFD1-201ENST00000395878 KCNK17Q96T54 332 aa15.08■□□□□ 0
UBFD1-201ENST00000395878 CLN8Q9UBY8 286 aa15.08■□□□□ 0
UBFD1-201ENST00000395878 GAPDHP04406 335 aaKnown RBP15.08■□□□□ 0
UBFD1-201ENST00000395878 ISG15P05161 165 aa15.08■□□□□ 0
UBFD1-201ENST00000395878 HOXA6P31267 233 aa15.08■□□□□ 0
UBFD1-201ENST00000395878 C19orf57Q0VDD7 668 aa15.08■□□□□ 0
UBFD1-201ENST00000395878 KIF13BQ9NQT8 1826 aa15.07■□□□□ 0
UBFD1-201ENST00000395878 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.07■□□□□ 0
UBFD1-201ENST00000395878 LILRB1Q8NHL6 650 aaPredicted RBP15.07■□□□□ 0
UBFD1-201ENST00000395878 MARS2Q96GW9 593 aaKnown RBP15.07■□□□□ 0
UBFD1-201ENST00000395878 TMUB1Q9BVT8 246 aa15.07■□□□□ 0
UBFD1-201ENST00000395878 OR51B2Q9Y5P1 312 aa15.07■□□□□ 0
UBFD1-201ENST00000395878 QSER1Q2KHR3 1735 aa15.07■□□□□ 0
UBFD1-201ENST00000395878 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms