RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 B4GALNT1Q00973 533 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 TCF24Q7RTU0 167 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 GCSAMQ8N6F7 178 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 PATE1Q8WXA2 126 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 NRIP2Q9BQI9 281 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 QSER1Q2KHR3 1735 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 SCN7AQ01118 1682 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.55□□□□□ -1.36
SYNE2-205ENST00000394768 ZNF253O75346 499 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 HLA-DRB5Q30154 266 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 FANCMQ8IYD8 2048 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 H3BRM9 83 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 SEMG1P04279 462 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 FABP5Q01469 135 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 ZNF770Q6IQ21 691 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-205ENST00000394768 MOGAT3Q86VF5 341 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 MMD2Q8IY49 270 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 ZNF502Q8TBZ5 544 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 OR51B2Q9Y5P1 312 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 PLPP3O14495 311 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 HOXA3O43365 443 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-205ENST00000394768 TMEM33P57088 247 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 HLA-DRB3P79483 266 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 DHRS2Q13268 280 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 ABCA3Q99758 1704 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 DCTDP32321 178 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 ASB10Q8WXI3 467 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 TMEM37Q8WXS4 190 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 TAF1P21675 1872 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 TMEM272A0A1B0GTI8 110 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 TMEM189A5PLL7 270 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 J3QR06 171 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 J3QT63 122 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 CTAG2O75638 210 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 B2MP61769 119 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 SSC4DQ8WTU2 575 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 MTFP1Q9UDX5 166 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 FZR1Q9UM11 496 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 SRSF10O75494 262 aaKnown RBP6.55□□□□□ -1.36
SYNE2-205ENST00000394768 OR10J1P30954 320 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 WNT3P56703 355 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 NXPH1P58417 271 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 COL9A2Q14055 689 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-205ENST00000394768 INPP5JQ15735 1006 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-205ENST00000394768 TEX30Q5JUR7 227 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 PWWP2BQ6NUJ5 590 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 DOCK9Q9BZ29 2069 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 ABCA4P78363 2273 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 RBBP6Q7Z6E9 1792 aaKnown RBP6.55□□□□□ -1.36
SYNE2-205ENST00000394768 C7orf72A4D263 438 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 PDLIM4P50479 330 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 ANKRD34AQ69YU3 496 aa6.55□□□□□ -1.36
SYNE2-205ENST00000394768 A0A0G2JLM5 398 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 IFITM10A6NMD0 228 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 CD300LDQ6UXZ3 194 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 RFESDQ8TAC1 157 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 C9orf170A2RU37 121 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 CCR2P41597 374 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 PAXXQ9BUH6 204 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 DNAJB12Q9NXW2 375 aaKnown RBP6.54□□□□□ -1.36
SYNE2-205ENST00000394768 MMP9P14780 707 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 MLF1P58340 268 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 BCDIN3DQ7Z5W3 292 aaKnown RBP6.54□□□□□ -1.36
SYNE2-205ENST00000394768 TTRP02766 147 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 CACNG7P62955 275 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 TTC32Q5I0X7 151 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 MRM1Q6IN84 353 aaKnown RBP6.54□□□□□ -1.36
SYNE2-205ENST00000394768 OR8A1Q8NGG7 326 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 HMGCLL1Q8TB92 370 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 ABHD3Q8WU67 409 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 ABHD1Q96SE0 405 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 MAP1LC3AQ9H492 121 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 ZNF768Q9H5H4 540 aaKnown RBP6.54□□□□□ -1.36
SYNE2-205ENST00000394768 ING1Q9UK53 422 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-205ENST00000394768 SIGLEC7Q9Y286 467 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 CTXND1A0A1B0GTU2 59 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 OR4C46A6NHA9 309 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 FAM157CP0CG43 387 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 GGTLC2Q14390 218 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 PCSK4Q6UW60 755 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 TBX15Q96SF7 602 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 RBMY1BA6NDE4 496 aaKnown RBP6.54□□□□□ -1.36
SYNE2-205ENST00000394768 RBMY1EA6NEQ0 496 aaKnown RBP6.54□□□□□ -1.36
SYNE2-205ENST00000394768 AP4M1O00189 453 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 RBMY1DP0C7P1 496 aaKnown RBP6.54□□□□□ -1.36
SYNE2-205ENST00000394768 RBMY1A1P0DJD3 496 aaKnown RBP6.54□□□□□ -1.36
SYNE2-205ENST00000394768 RBMY1CP0DJD4 496 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 CKS2P33552 79 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 SPINK14Q6IE38 97 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 ADAT3Q96EY9 351 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-205ENST00000394768 DUX5Q96PT3 197 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 FSCN3Q9NQT6 498 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 OPN4Q9UHM6 478 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 LIPGQ9Y5X9 500 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 NUDT3O95989 172 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 HPXP02790 462 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 PRICKLE4Q2TBC4 344 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 CHST5Q9GZS9 411 aa6.54□□□□□ -1.36
SYNE2-205ENST00000394768 DUSP15Q9H1R2 295 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-205ENST00000394768 GPR35Q9HC97 309 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms