RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 TEX261Q6UWH6 196 aa12.51□□□□□ -0.41
CCT4-201ENST00000394440 ZNF565Q8N9K5 539 aa12.51□□□□□ -0.41
CCT4-201ENST00000394440 LILRB1Q8NHL6 650 aaPredicted RBP12.51□□□□□ -0.41
CCT4-201ENST00000394440 ANGPTL6Q8NI99 470 aa12.51□□□□□ -0.41
CCT4-201ENST00000394440 C2orf50Q96LR7 162 aa12.51□□□□□ -0.41
CCT4-201ENST00000394440 TP53RKQ96S44 253 aa12.51□□□□□ -0.41
CCT4-201ENST00000394440 METTL8Q9H825 291 aaKnown RBP12.51□□□□□ -0.41
CCT4-201ENST00000394440 CCL28Q9NRJ3 127 aa12.51□□□□□ -0.41
CCT4-201ENST00000394440 DNAJB11Q9UBS4 358 aa12.51□□□□□ -0.41
CCT4-201ENST00000394440 TNFSF18Q9UNG2 199 aa12.51□□□□□ -0.41
CCT4-201ENST00000394440 U3KQ87 197 aa12.51□□□□□ -0.41
CCT4-201ENST00000394440 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.51□□□□□ -0.41
CCT4-201ENST00000394440 OOEPA6NGQ2 149 aa12.51□□□□□ -0.41
CCT4-201ENST00000394440 E7EQL1 145 aa12.51□□□□□ -0.41
CCT4-201ENST00000394440 PSMB6P28072 239 aa12.51□□□□□ -0.41
CCT4-201ENST00000394440 S100A11P31949 105 aa12.51□□□□□ -0.41
CCT4-201ENST00000394440 SNTB1Q13884 538 aaKnown RBP12.51□□□□□ -0.41
CCT4-201ENST00000394440 VRK1Q99986 396 aaPredicted RBP12.51□□□□□ -0.41
CCT4-201ENST00000394440 TOLLIPQ9H0E2 274 aa12.51□□□□□ -0.41
CCT4-201ENST00000394440 RELNP78509 3460 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 IGHV3OR15-7A0A075B7D8 119 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 C1QL1O75973 258 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 C4BPBP20851 252 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 GABRA2P47869 451 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 GLIPR1P48060 266 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 KRBOX4Q5JUW0 171 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 TBC1D26Q86UD7 250 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 ZNF546Q86UE3 836 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 BOLLQ8N9W6 283 aaKnown RBP12.5□□□□□ -0.41
CCT4-201ENST00000394440 LHFPL5Q8TAF8 219 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 C18orf12Q96KH6 178 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 SNX22Q96L94 193 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 MFFQ9GZY8 342 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 ERRFI1Q9UJM3 462 aaPredicted RBP12.5□□□□□ -0.41
CCT4-201ENST00000394440 PKDREJQ9NTG1 2253 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 HIVEP3Q5T1R4 2406 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 C3orf85A0A1B0GTC6 90 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 RNF222A6NCQ9 220 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 CD80P33681 288 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 ZNF345Q14585 488 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 FAM201AQ5SY85 155 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 GGNBP1Q5YKI7 109 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 TMUB2Q71RG4 321 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 PRR18Q8N4B5 295 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 BVESQ8NE79 360 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 UBALD1Q8TB05 177 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 LINC01560Q8TB33 94 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 KCNIP1Q9NZI2 227 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 MBD2Q9UBB5 411 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 NDRG3Q9UGV2 375 aa12.5□□□□□ -0.41
CCT4-201ENST00000394440 FASNP49327 2511 aaKnown RBP12.5□□□□□ -0.41
CCT4-201ENST00000394440 ANKHD1Q8IWZ3 2542 aaKnown RBP12.5□□□□□ -0.41
CCT4-201ENST00000394440 H0YIZ8 118 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 PHF1O43189 567 aaPredicted RBP12.49□□□□□ -0.41
CCT4-201ENST00000394440 IGLV2-14P01704 120 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 WNT2P09544 360 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 LYL1P12980 280 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 STUMQ69YW2 141 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 OR8H1Q8NGG4 311 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 OR10V1Q8NGI7 309 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 OR13A1Q8NGR1 328 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 OR1L1Q8NH94 360 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 NEUROG1Q92886 237 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 RNF126Q9BV68 326 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 TMEM222Q9H0R3 208 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 MAB21L2Q9Y586 359 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 HSD17B6O14756 317 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 SIAH2O43255 324 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 TLE1Q04724 770 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 NDUFA5Q16718 116 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 FAM209AQ5JX71 171 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 C6orf183Q5T699 404 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 LGI3Q8N145 548 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 TPRX1Q8N7U7 411 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 ZNF680Q8NEM1 530 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 THAP6Q8TBB0 222 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 LURAP1Q96LR2 239 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 PARP12Q9H0J9 701 aaKnown RBP12.49□□□□□ -0.41
CCT4-201ENST00000394440 PPP1R3CQ9UQK1 317 aa12.49□□□□□ -0.41
CCT4-201ENST00000394440 K7N7A8 449 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 MGST3O14880 152 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 CYB5R3P00387 301 aaPredicted RBP12.48□□□□□ -0.41
CCT4-201ENST00000394440 HBZP02008 142 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 CD3EP07766 207 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 TNFRSF1AP19438 455 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 CCL8P80075 99 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 TEX36Q5VZQ5 186 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 TGIF2LYQ8IUE0 185 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 PPP1R35Q8TAP8 253 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 MRGPRDQ8TDS7 321 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 GALMQ96C23 342 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 SDSLQ96GA7 329 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 TMEM56Q96MV1 263 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 ARL6Q9H0F7 186 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 ITGB1BP2Q9UKP3 347 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 TMEM56-RWDD3S4R434 201 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 VSTM5A8MXK1 200 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 PGLYRP1O75594 196 aaPredicted RBP12.48□□□□□ -0.41
CCT4-201ENST00000394440 CFDP00746 253 aaPredicted RBP12.48□□□□□ -0.41
CCT4-201ENST00000394440 UCP1P25874 307 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms