RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 CXCL3P19876 107 aa16.88■□□□□ 0.29
HDDC3-202ENST00000394272 CD83Q01151 205 aa16.88■□□□□ 0.29
HDDC3-202ENST00000394272 UBALD1Q8TB05 177 aa16.88■□□□□ 0.29
HDDC3-202ENST00000394272 ZFAND1Q8TCF1 268 aa16.88■□□□□ 0.29
HDDC3-202ENST00000394272 NEU4Q8WWR8 484 aaPredicted RBP16.88■□□□□ 0.29
HDDC3-202ENST00000394272 DCTN5Q9BTE1 182 aa16.88■□□□□ 0.29
HDDC3-202ENST00000394272 RANGRFQ9HD47 186 aaPredicted RBP16.88■□□□□ 0.29
HDDC3-202ENST00000394272 DLL4Q9NR61 685 aa16.88■□□□□ 0.29
HDDC3-202ENST00000394272 OR1A1Q9P1Q5 309 aa16.88■□□□□ 0.29
HDDC3-202ENST00000394272 C14orf166Q9Y224 244 aaKnown RBP16.88■□□□□ 0.29
HDDC3-202ENST00000394272 HEXAP06865 529 aa16.88■□□□□ 0.29
HDDC3-202ENST00000394272 RPS2P15880 293 aaKnown RBP16.88■□□□□ 0.29
HDDC3-202ENST00000394272 MRPS11P82912 194 aaKnown RBP16.88■□□□□ 0.29
HDDC3-202ENST00000394272 TRAT1Q6PIZ9 186 aa16.88■□□□□ 0.29
HDDC3-202ENST00000394272 OR1L1Q8NH94 360 aa16.88■□□□□ 0.29
HDDC3-202ENST00000394272 OPN4Q9UHM6 478 aa16.88■□□□□ 0.29
HDDC3-202ENST00000394272 USF3Q68DE3 2245 aa16.88■□□□□ 0.29
HDDC3-202ENST00000394272 C15orf65H3BRN8 121 aa16.87■□□□□ 0.29
HDDC3-202ENST00000394272 HBZP02008 142 aa16.87■□□□□ 0.29
HDDC3-202ENST00000394272 EDDM3BP56851 147 aa16.87■□□□□ 0.29
HDDC3-202ENST00000394272 SUPT4H1P63272 117 aaKnown RBP16.87■□□□□ 0.29
HDDC3-202ENST00000394272 SLC38A6Q8IZM9 456 aa16.87■□□□□ 0.29
HDDC3-202ENST00000394272 FYTTD1Q96QD9 318 aaKnown RBP16.87■□□□□ 0.29
HDDC3-202ENST00000394272 RSRP1Q9BUV0 290 aa16.87■□□□□ 0.29
HDDC3-202ENST00000394272 LRRK2Q5S007 2527 aa16.87■□□□□ 0.29
HDDC3-202ENST00000394272 IGKV1D-13A0A0B4J2D9 117 aa16.86■□□□□ 0.29
HDDC3-202ENST00000394272 FAM172BPA6NC97 362 aa16.86■□□□□ 0.29
HDDC3-202ENST00000394272 IGKV1-13P0DP09 117 aa16.86■□□□□ 0.29
HDDC3-202ENST00000394272 SSTR5P35346 364 aa16.86■□□□□ 0.29
HDDC3-202ENST00000394272 SPICQ8N5J4 248 aa16.86■□□□□ 0.29
HDDC3-202ENST00000394272 GALMQ96C23 342 aa16.86■□□□□ 0.29
HDDC3-202ENST00000394272 TMEM246Q9BRR3 403 aa16.86■□□□□ 0.29
HDDC3-202ENST00000394272 KAAG1Q9UBP8 84 aa16.86■□□□□ 0.29
HDDC3-202ENST00000394272 OR2W1Q9Y3N9 320 aa16.86■□□□□ 0.29
HDDC3-202ENST00000394272 AKAP6Q13023 2319 aa16.86■□□□□ 0.29
HDDC3-202ENST00000394272 FCN3O75636 299 aa16.86■□□□□ 0.29
HDDC3-202ENST00000394272 GZMHP20718 246 aa16.86■□□□□ 0.29
HDDC3-202ENST00000394272 KCNJ8Q15842 424 aa16.86■□□□□ 0.29
HDDC3-202ENST00000394272 LDLRAD3Q86YD5 345 aa16.86■□□□□ 0.29
HDDC3-202ENST00000394272 C12orf45Q8N5I9 185 aaPredicted RBP16.86■□□□□ 0.29
HDDC3-202ENST00000394272 ZNF565Q8N9K5 539 aa16.86■□□□□ 0.29
HDDC3-202ENST00000394272 OR2AK2Q8NG84 335 aa16.86■□□□□ 0.29
HDDC3-202ENST00000394272 MITD1Q8WV92 249 aa16.86■□□□□ 0.29
HDDC3-202ENST00000394272 C14orf79Q96F83 325 aa16.86■□□□□ 0.29
HDDC3-202ENST00000394272 OR6C3Q9NZP0 311 aa16.86■□□□□ 0.29
HDDC3-202ENST00000394272 NDUFA2O43678 99 aa16.85■□□□□ 0.29
HDDC3-202ENST00000394272 LY6HO94772 140 aa16.85■□□□□ 0.29
HDDC3-202ENST00000394272 CGB3P0DN86 165 aa16.85■□□□□ 0.29
HDDC3-202ENST00000394272 CGB7P0DN87 165 aa16.85■□□□□ 0.29
HDDC3-202ENST00000394272 VAMP1P23763 118 aa16.85■□□□□ 0.29
HDDC3-202ENST00000394272 GNRHRP30968 328 aa16.85■□□□□ 0.29
HDDC3-202ENST00000394272 TLE4Q04727 773 aa16.85■□□□□ 0.29
HDDC3-202ENST00000394272 LYPD2Q6UXB3 125 aa16.85■□□□□ 0.29
HDDC3-202ENST00000394272 TCTE3Q8IZS6 198 aa16.85■□□□□ 0.29
HDDC3-202ENST00000394272 FGFRL1Q8N441 504 aa16.85■□□□□ 0.29
HDDC3-202ENST00000394272 ARL11Q969Q4 196 aa16.85■□□□□ 0.29
HDDC3-202ENST00000394272 ZNF486Q96H40 463 aaPredicted RBP16.85■□□□□ 0.29
HDDC3-202ENST00000394272 TOLLIPQ9H0E2 274 aa16.85■□□□□ 0.29
HDDC3-202ENST00000394272 SLC25A10Q9UBX3 287 aaPredicted RBP16.85■□□□□ 0.29
HDDC3-202ENST00000394272 MEX3AA1L020 520 aaKnown RBP16.84■□□□□ 0.29
HDDC3-202ENST00000394272 HSPA12AO43301 675 aa16.84■□□□□ 0.29
HDDC3-202ENST00000394272 SFT2D2O95562 160 aa16.84■□□□□ 0.29
HDDC3-202ENST00000394272 DUS4LO95620 317 aaKnown RBP16.84■□□□□ 0.29
HDDC3-202ENST00000394272 IL2RGP31785 369 aa16.84■□□□□ 0.29
HDDC3-202ENST00000394272 PIGPP57054 158 aa16.84■□□□□ 0.29
HDDC3-202ENST00000394272 CLEC18BQ6UXF7 455 aa16.84■□□□□ 0.29
HDDC3-202ENST00000394272 SLC2A9Q9NRM0 540 aa16.84■□□□□ 0.29
HDDC3-202ENST00000394272 RDH8Q9NYR8 311 aa16.84■□□□□ 0.29
HDDC3-202ENST00000394272 CTSZQ9UBR2 303 aa16.84■□□□□ 0.29
HDDC3-202ENST00000394272 CRYM-AS1A6NIL9 109 aa16.84■□□□□ 0.29
HDDC3-202ENST00000394272 ADAM20O43506 726 aa16.84■□□□□ 0.29
HDDC3-202ENST00000394272 IGHV2-70P01814 119 aa16.84■□□□□ 0.29
HDDC3-202ENST00000394272 CDKN1AP38936 164 aa16.84■□□□□ 0.29
HDDC3-202ENST00000394272 C2orf68Q2NKX9 166 aa16.84■□□□□ 0.29
HDDC3-202ENST00000394272 LPCAT3Q6P1A2 487 aa16.84■□□□□ 0.29
HDDC3-202ENST00000394272 TCF23Q7RTU1 214 aa16.84■□□□□ 0.29
HDDC3-202ENST00000394272 SECTM1Q8WVN6 248 aa16.84■□□□□ 0.29
HDDC3-202ENST00000394272 PLEKHF2Q9H8W4 249 aa16.84■□□□□ 0.29
HDDC3-202ENST00000394272 MGAT4CQ9UBM8 478 aa16.84■□□□□ 0.29
HDDC3-202ENST00000394272 DOCK11Q5JSL3 2073 aa16.83■□□□□ 0.29
HDDC3-202ENST00000394272 SPINT2O43291 252 aa16.83■□□□□ 0.28
HDDC3-202ENST00000394272 DAOP14920 347 aa16.83■□□□□ 0.28
HDDC3-202ENST00000394272 CD34P28906 385 aa16.83■□□□□ 0.28
HDDC3-202ENST00000394272 CEACAM6P40199 344 aa16.83■□□□□ 0.28
HDDC3-202ENST00000394272 HTD2P86397 168 aa16.83■□□□□ 0.28
HDDC3-202ENST00000394272 PARP12Q9H0J9 701 aaKnown RBP16.83■□□□□ 0.28
HDDC3-202ENST00000394272 CLEC4MQ9H2X3 399 aaPredicted RBP16.83■□□□□ 0.28
HDDC3-202ENST00000394272 CLEC18AA5D8T8 446 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 CLDN1O95832 211 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 ANXA3P12429 323 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 ABCA11PQ4W5N1 156 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 PHLDA2Q53GA4 152 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 UXS1Q8NBZ7 420 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 CLEC18CQ8NCF0 446 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 OR52L2PQ8NGH6 319 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 OR10V1Q8NGI7 309 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 RFESDQ8TAC1 157 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 CASTOR1Q8WTX7 329 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 IGFBPL1Q8WX77 278 aa16.82■□□□□ 0.28
HDDC3-202ENST00000394272 CORO2AQ92828 525 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms