RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 P2RY6Q15077 328 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 PEA15Q15121 130 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 ZNF718Q3SXZ3 478 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 VWA1Q6PCB0 445 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 BEND4Q6ZU67 534 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 WDR86Q86TI4 376 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 MYPOPQ86VE0 399 aaPredicted RBP6.1□□□□□ -1.43
SMAD1-202ENST00000394092 STX12Q86Y82 276 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 FAM169BQ8N8A8 192 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 C9orf106Q8NAJ2 232 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 ZBTB34Q8NCN2 500 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 CLRN3Q8NCR9 226 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 KLF14Q8TD94 323 aaPredicted RBP6.1□□□□□ -1.43
SMAD1-202ENST00000394092 IL1F10Q8WWZ1 152 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 GNPNAT1Q96EK6 184 aaPredicted RBP6.1□□□□□ -1.43
SMAD1-202ENST00000394092 PBDC1Q9BVG4 233 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 C11orf1Q9H5F2 150 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 HES4Q9HCC6 221 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 PLSCR4Q9NRQ2 329 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 ERRFI1Q9UJM3 462 aaPredicted RBP6.1□□□□□ -1.43
SMAD1-202ENST00000394092 PURGQ9UJV8 347 aaKnown RBP6.1□□□□□ -1.43
SMAD1-202ENST00000394092 ZDHHC8Q9ULC8 765 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 WIPI2Q9Y4P8 454 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 KPTNQ9Y664 436 aa6.1□□□□□ -1.43
SMAD1-202ENST00000394092 INTS1Q8N201 2190 aaKnown RBP6.1□□□□□ -1.43
SMAD1-202ENST00000394092 CHD3Q12873 2000 aaKnown RBP6.09□□□□□ -1.43
SMAD1-202ENST00000394092 A0A1W2PR80 420 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 OOEPA6NGQ2 149 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 RNASEK-C17orf49H0YIS7 233 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.09□□□□□ -1.43
SMAD1-202ENST00000394092 WDR1O75083 606 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 DFFBO76075 338 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 CD5P06127 495 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 GRPP07492 148 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 SFTA3P0C7M3 94 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 MUC1P15941 1255 aaPredicted RBP6.09□□□□□ -1.43
SMAD1-202ENST00000394092 ADCYAP1P18509 176 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 POLR2GP62487 172 aaKnown RBP eCLIP6.09□□□□□ -1.43
SMAD1-202ENST00000394092 ID3Q02535 119 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 NHLH2Q02577 135 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 ZNF616Q08AN1 781 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 MSMO1Q15800 293 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 DEFB109BQ30KR1 87 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 SMIM21Q3B7S5 101 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 TRAT1Q6PIZ9 186 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 ATRAIDQ6UW56 229 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 C20orf204Q6ZNR8 217 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 PUSL1Q8N0Z8 303 aaKnown RBP6.09□□□□□ -1.43
SMAD1-202ENST00000394092 TMEM252Q8N6L7 170 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 OR51H1Q8NH63 302 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 PRR7Q8TB68 274 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 PLPPR1Q8TBJ4 325 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 NINJ1Q92982 152 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 RAB40CQ96S21 281 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 TLNRD1Q9H1K6 362 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 SMDT1Q9H4I9 107 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 C19orf12Q9NSK7 152 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 KCNS2Q9ULS6 477 aa6.09□□□□□ -1.43
SMAD1-202ENST00000394092 GTF3C1Q12789 2109 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 HEATR1Q9H583 2144 aaKnown RBP6.08□□□□□ -1.44
SMAD1-202ENST00000394092 IGSF23A1L1A6 192 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 MBD3L4A6NDZ8 208 aaPredicted RBP6.08□□□□□ -1.44
SMAD1-202ENST00000394092 BTBD17A6NE02 478 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 MBD3L3A6NE82 208 aaPredicted RBP6.08□□□□□ -1.44
SMAD1-202ENST00000394092 FAM24AA6NFZ4 105 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 MBD3L5A6NJ08 208 aaPredicted RBP6.08□□□□□ -1.44
SMAD1-202ENST00000394092 A6NLC8 198 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 IFNL4K9M1U5 179 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 TNFSF12O43508 249 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 IGLV1-44P01699 117 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 OR8U9P0C7N5 309 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 LMO1P25800 156 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 SNCAP37840 140 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 MPV17P39210 176 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 RAB2AP61019 212 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 ERVS71-1P61550 626 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 CATR1Q13166 79 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 SRSF6Q13247 344 aaKnown RBP6.08□□□□□ -1.44
SMAD1-202ENST00000394092 MIDNQ504T8 468 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 MBNL2Q5VZF2 373 aaKnown RBP6.08□□□□□ -1.44
SMAD1-202ENST00000394092 SLC35E4Q6ICL7 350 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 DPPA3Q6W0C5 159 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 BHLHA15Q7RTS1 189 aaPredicted RBP6.08□□□□□ -1.44
SMAD1-202ENST00000394092 TCTEX1D1Q8N7M0 179 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 WDR31Q8NA23 367 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 KDF1Q8NAX2 398 aaPredicted RBP6.08□□□□□ -1.44
SMAD1-202ENST00000394092 HSD17B11Q8NBQ5 300 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 MBD3L2Q8NHZ7 208 aaPredicted RBP6.08□□□□□ -1.44
SMAD1-202ENST00000394092 FAM216AQ8WUB2 273 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 GALMQ96C23 342 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 TMEM231Q9H6L2 316 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 WFDC1Q9HC57 220 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 OR1A1Q9P1Q5 309 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 OR14J1Q9UGF5 321 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 CACFD1Q9UGQ2 172 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 NDRG3Q9UGV2 375 aa6.08□□□□□ -1.44
SMAD1-202ENST00000394092 URB1O60287 2271 aaKnown RBP6.07□□□□□ -1.44
SMAD1-202ENST00000394092 IGHV2OR16-5A0A0B4J2B6 119 aa6.07□□□□□ -1.44
SMAD1-202ENST00000394092 OR5H1A6NKK0 313 aa6.07□□□□□ -1.44
SMAD1-202ENST00000394092 FAM90A26D6RGX4 464 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms