RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 BSCL2Q96G97 398 aaPredicted RBP12.05□□□□□ -0.48
MKS1-203ENST00000393120 SMIM3Q9BZL3 60 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 TOLLIPQ9H0E2 274 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 FAM212BQ9NTI7 297 aaPredicted RBP12.05□□□□□ -0.48
MKS1-203ENST00000393120 KCNIP1Q9NZI2 227 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 A0A1B0GU03 582 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 KLK10O43240 276 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 PITX3O75364 302 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 MED6O75586 246 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 PTBP3O95758 552 aaKnown RBP12.05□□□□□ -0.48
MKS1-203ENST00000393120 SPP1P10451 314 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 LPAR6P43657 344 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 CAV2P51636 162 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 C10orf91Q5T1B1 145 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 ZNF474Q6S9Z5 364 aaPredicted RBP12.05□□□□□ -0.48
MKS1-203ENST00000393120 GPHA2Q96T91 129 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 SLC25A31Q9H0C2 315 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 PLEKHF2Q9H8W4 249 aa12.05□□□□□ -0.48
MKS1-203ENST00000393120 SEBOXQ9HB31 216 aaPredicted RBP12.05□□□□□ -0.48
MKS1-203ENST00000393120 LYRM2Q9NU23 88 aaPredicted RBP12.05□□□□□ -0.48
MKS1-203ENST00000393120 TNFSF12O43508 249 aa12.04□□□□□ -0.48
MKS1-203ENST00000393120 FBXO24O75426 580 aa12.04□□□□□ -0.48
MKS1-203ENST00000393120 SERPINE2P07093 398 aa12.04□□□□□ -0.48
MKS1-203ENST00000393120 CD200P41217 278 aa12.04□□□□□ -0.48
MKS1-203ENST00000393120 POLR2GP62487 172 aaKnown RBP eCLIP12.04□□□□□ -0.48
MKS1-203ENST00000393120 EWSR1Q01844 656 aaKnown RBP eCLIP12.04□□□□□ -0.48
MKS1-203ENST00000393120 PAX5Q02548 391 aa12.04□□□□□ -0.48
MKS1-203ENST00000393120 NHLH2Q02577 135 aa12.04□□□□□ -0.48
MKS1-203ENST00000393120 BTN1A1Q13410 526 aa12.04□□□□□ -0.48
MKS1-203ENST00000393120 CXorf66Q5JRM2 361 aaPredicted RBP12.04□□□□□ -0.48
MKS1-203ENST00000393120 ZNF826PQ6ZT77 177 aa12.04□□□□□ -0.48
MKS1-203ENST00000393120 BOLLQ8N9W6 283 aaKnown RBP12.04□□□□□ -0.48
MKS1-203ENST00000393120 SNIP1Q8TAD8 396 aaKnown RBP12.04□□□□□ -0.48
MKS1-203ENST00000393120 LSM10Q969L4 123 aaKnown RBP12.04□□□□□ -0.48
MKS1-203ENST00000393120 TRAV39A0A0B4J263 110 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 ABCD4O14678 606 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 HSPA12AO43301 675 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 DANCRP0C864 163 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 CFHR2P36980 270 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 RAB5CP51148 216 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 F2RL1P55085 397 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 SPAG16Q8N0X2 631 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 ZBTB34Q8NCN2 500 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 LRRC46Q96FV0 321 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 NARS2Q96I59 477 aaKnown RBP12.03□□□□□ -0.48
MKS1-203ENST00000393120 SFXN3Q9BWM7 321 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 MS4A7Q9GZW8 240 aaPredicted RBP12.03□□□□□ -0.48
MKS1-203ENST00000393120 MSL2Q9HCI7 577 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 OR14J1Q9UGF5 321 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 ESPL1Q14674 2120 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 IGHV3-64DA0A0J9YX35 117 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 OOEPA6NGQ2 149 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 A6NLC8 198 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 WNT9BO14905 357 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 ATG12O94817 140 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 CEACAM8P31997 349 aaPredicted RBP12.03□□□□□ -0.48
MKS1-203ENST00000393120 CEACAM6P40199 344 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 MSMO1Q15800 293 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 SMIM21Q3B7S5 101 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 PRAMEF6Q5VXH4 476 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 CLEC9AQ6UXN8 241 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 GALMQ96C23 342 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 HRH4Q9H3N8 390 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 SSUH2Q9Y2M2 353 aa12.03□□□□□ -0.48
MKS1-203ENST00000393120 CARHSP1Q9Y2V2 147 aaKnown RBP12.03□□□□□ -0.48
MKS1-203ENST00000393120 FAM24AA6NFZ4 105 aa12.02□□□□□ -0.49
MKS1-203ENST00000393120 PSG2P11465 335 aa12.02□□□□□ -0.49
MKS1-203ENST00000393120 CEBPDP49716 269 aaPredicted RBP12.02□□□□□ -0.49
MKS1-203ENST00000393120 VAMP2P63027 116 aa12.02□□□□□ -0.49
MKS1-203ENST00000393120 TAGLNQ01995 201 aaKnown RBP12.02□□□□□ -0.49
MKS1-203ENST00000393120 BAXQ07812 192 aa12.02□□□□□ -0.49
MKS1-203ENST00000393120 FAM90A1Q86YD7 464 aa12.02□□□□□ -0.49
MKS1-203ENST00000393120 TMEM252Q8N6L7 170 aa12.02□□□□□ -0.49
MKS1-203ENST00000393120 OR10Z1Q8NGY1 313 aa12.02□□□□□ -0.49
MKS1-203ENST00000393120 OR51H1Q8NH63 302 aa12.02□□□□□ -0.49
MKS1-203ENST00000393120 FAM57AQ8TBR7 257 aa12.02□□□□□ -0.49
MKS1-203ENST00000393120 GPR146Q96CH1 333 aa12.02□□□□□ -0.49
MKS1-203ENST00000393120 LIN7CQ9NUP9 197 aaKnown RBP12.02□□□□□ -0.49
MKS1-203ENST00000393120 RNF115Q9Y4L5 304 aa12.02□□□□□ -0.49
MKS1-203ENST00000393120 IGSF23A1L1A6 192 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 RNF212BA8MTL3 300 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 KIAA1324LA8MWY0 1029 aaPredicted RBP12.01□□□□□ -0.49
MKS1-203ENST00000393120 PROB1E7EW31 1015 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 K7EM74 188 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 SSSCA1O60232 199 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 IGHV3-13P01766 116 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 SRSF3P84103 164 aaKnown RBP12.01□□□□□ -0.49
MKS1-203ENST00000393120 ZNF266Q14584 549 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 ATRAIDQ6UW56 229 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 PRR18Q8N4B5 295 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 COMMD1Q8N668 190 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 S100PBPQ96BU1 408 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 UQCC1Q9NVA1 299 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 COQ3Q9NZJ6 369 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 FZR1Q9UM11 496 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 STRAPQ9Y3F4 350 aaKnown RBP12.01□□□□□ -0.49
MKS1-203ENST00000393120 C12orf77C9JDV5 145 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 MKRN2OSH3BPM6 223 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 OR8U9P0C7N5 309 aa12.01□□□□□ -0.49
MKS1-203ENST00000393120 GLRXP35754 106 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms