RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 MSR1P21757 451 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 PDLIM4P50479 330 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 CYCSP99999 105 aaKnown RBP16.33■□□□□ 0.2
CCDC50-202ENST00000392456 CEACAM16Q2WEN9 425 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 FDX2Q6P4F2 183 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 WDR73Q6P4I2 378 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 TMEM108Q6UXF1 575 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 Q6ZS92 163 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 FOXL2NBQ6ZUU3 175 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 CATSPERDQ86XM0 798 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 BHLHE23Q8NDY6 225 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 TECTBQ96PL2 329 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 CST11Q9H112 138 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 G6PC2Q9NQR9 355 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 SLC7A10Q9NS82 523 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 IL19Q9UHD0 177 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 NAGKQ9UJ70 344 aa16.33■□□□□ 0.2
CCDC50-202ENST00000392456 M0QYG6 137 aa16.32■□□□□ 0.2
CCDC50-202ENST00000392456 B4GALT1P15291 398 aa16.32■□□□□ 0.2
CCDC50-202ENST00000392456 GZMHP20718 246 aa16.32■□□□□ 0.2
CCDC50-202ENST00000392456 HSD11B1P28845 292 aa16.32■□□□□ 0.2
CCDC50-202ENST00000392456 C9orf135Q5VTT2 229 aa16.32■□□□□ 0.2
CCDC50-202ENST00000392456 S100A7AQ86SG5 101 aa16.32■□□□□ 0.2
CCDC50-202ENST00000392456 TMEM229BQ8NBD8 167 aa16.32■□□□□ 0.2
CCDC50-202ENST00000392456 OR2AJ1Q8NGZ0 328 aa16.32■□□□□ 0.2
CCDC50-202ENST00000392456 SLC17A5Q9NRA2 495 aa16.32■□□□□ 0.2
CCDC50-202ENST00000392456 ADRA2CP18825 462 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 SERPINA2P20848 420 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 IL13RA1P78552 427 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 OR2D3Q8NGH3 330 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 TOMM40LQ969M1 308 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 SLC5A6Q9Y289 635 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 RAXQ9Y2V3 346 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 GTF3C1Q12789 2109 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 TRAV39A0A0B4J263 110 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 K7ENP7 123 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 PRSS3P35030 304 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 FAM3AP98173 230 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 COL10A1Q03692 680 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 PMS2P11Q13670 270 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 INO80CQ6PI98 192 aaPredicted RBP16.31■□□□□ 0.2
CCDC50-202ENST00000392456 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.31■□□□□ 0.2
CCDC50-202ENST00000392456 TMEM104Q8NE00 496 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 OR5D18Q8NGL1 313 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 FGFBP3Q8TAT2 258 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 GPX8Q8TED1 209 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 TMEM45BQ96B21 275 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 GPR35Q9HC97 309 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 R4GMQ9 66 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 SPTA1P02549 2419 aa16.31■□□□□ 0.2
CCDC50-202ENST00000392456 XKRY2A2RUG3 117 aa16.3■□□□□ 0.2
CCDC50-202ENST00000392456 HSD17B6O14756 317 aa16.3■□□□□ 0.2
CCDC50-202ENST00000392456 RPUSD3Q6P087 351 aaKnown RBP16.3■□□□□ 0.2
CCDC50-202ENST00000392456 SMDT1Q9H4I9 107 aa16.3■□□□□ 0.2
CCDC50-202ENST00000392456 TRBV5-5A0A0J9YX44 114 aa16.3■□□□□ 0.2
CCDC50-202ENST00000392456 C5orf63A6NC05 138 aa16.3■□□□□ 0.2
CCDC50-202ENST00000392456 TMEM212A6NML5 194 aa16.3■□□□□ 0.2
CCDC50-202ENST00000392456 C22orf46C9J442 243 aa16.3■□□□□ 0.2
CCDC50-202ENST00000392456 TNFSF13O75888 250 aa16.3■□□□□ 0.2
CCDC50-202ENST00000392456 DUS4LO95620 317 aaKnown RBP16.3■□□□□ 0.2
CCDC50-202ENST00000392456 GUCA1AP43080 201 aaPredicted RBP16.3■□□□□ 0.2
CCDC50-202ENST00000392456 ALDH3B1P43353 468 aa16.3■□□□□ 0.2
CCDC50-202ENST00000392456 MRPS34P82930 218 aaKnown RBP16.3■□□□□ 0.2
CCDC50-202ENST00000392456 RSPO1Q2MKA7 263 aaPredicted RBP16.3■□□□□ 0.2
CCDC50-202ENST00000392456 ANKRD16Q6P6B7 361 aa16.3■□□□□ 0.2
CCDC50-202ENST00000392456 LRP11Q86VZ4 500 aa16.3■□□□□ 0.2
CCDC50-202ENST00000392456 FAM206AQ9NX38 181 aa16.3■□□□□ 0.2
CCDC50-202ENST00000392456 ZNF319Q9P2F9 582 aa16.3■□□□□ 0.2
CCDC50-202ENST00000392456 RBM7Q9Y580 266 aaKnown RBP16.3■□□□□ 0.2
CCDC50-202ENST00000392456 ATRXP46100 2492 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 SLC22A20A6NK97 555 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 F6UZH7 168 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 OR3A2P47893 321 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 RND2P52198 227 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 Q499Y3 187 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 OCIAD2Q56VL3 154 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 FAM27BQ5VT28 67 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 TMEM106AQ96A25 262 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 HIST1H2AAQ96QV6 131 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 PRDM14Q9GZV8 571 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 SLCO5A1Q9H2Y9 848 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 CNTD2Q9H8S5 307 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 TMEM38BQ9NVV0 291 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 CACNA1AO00555 2505 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 HSPB2A8KAH6 182 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 E9PLN8 166 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 LMX1BO60663 402 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 DANCRP0C864 163 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 UBE2G2P60604 165 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 HSPB2Q16082 182 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 TBR1Q16650 682 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 ASPHD2Q6ICH7 369 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 OR51F2Q8NH61 342 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 CPT1CQ8TCG5 803 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 SMIM12Q96EX1 92 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 C12orf49Q9H741 205 aa16.29■□□□□ 0.2
CCDC50-202ENST00000392456 TRAV8-7A0A075B6U6 113 aa16.28■□□□□ 0.2
CCDC50-202ENST00000392456 TRAV18A0A075B6X5 111 aa16.28■□□□□ 0.2
CCDC50-202ENST00000392456 FAM221AA4D161 298 aa16.28■□□□□ 0.2
CCDC50-202ENST00000392456 ZNF878C9JN71 531 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms