RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 SP4Q02446 784 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 GINS1Q14691 196 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 QPRTQ15274 297 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 DEFB116Q30KQ4 102 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 MORN2Q502X0 79 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 CT45A1Q5HYN5 189 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 PYY3Q5JQD4 70 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 RBM48Q5RL73 367 aaKnown RBP1.94□□□□□ -2.1
PTPRC-205ENST00000391970 NXNL2Q5VZ03 156 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 STEAP4Q687X5 459 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 LPCAT3Q6P1A2 487 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 CLEC18BQ6UXF7 455 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 FAM151BQ6UXP7 276 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 ZFP2Q6ZN57 461 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 SLC16A13Q7RTY0 426 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 CMC1Q7Z7K0 106 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 TMEM150AQ86TG1 271 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 FUNDC1Q8IVP5 155 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 C10orf107Q8IVU9 208 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 CPNE9Q8IYJ1 553 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 PRSS58Q8IYP2 241 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 ZNF283Q8N7M2 679 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 FAM86B1Q8N7N1 296 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 ZFP41Q8N8Y5 198 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 C15orf56Q8N910 161 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 TMEM161BQ8NDZ6 487 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 NOXO1Q8NFA2 376 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 OR8D4Q8NGM9 314 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 OR2T4Q8NH00 348 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 OR5K1Q8NHB7 308 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 CT45A3Q8NHU0 189 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 LYPD6BQ8NI32 183 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 NUBPLQ8TB37 319 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 SPPL2BQ8TCT7 592 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 C16orf78Q8WTQ4 265 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 CDS1Q92903 461 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 CAPZA3Q96KX2 299 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 PPP1R36Q96LQ0 422 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 Q96MT0 163 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 MBOAT7Q96N66 472 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 OR2A5Q96R48 311 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 SULT4A1Q9BR01 284 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 MARVELD1Q9BSK0 173 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 DCUN1D5Q9BTE7 237 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 SLC25A2Q9BXI2 301 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 ZNF436Q9C0F3 470 aaPredicted RBP1.94□□□□□ -2.1
PTPRC-205ENST00000391970 ING2Q9H160 280 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 TLNRD1Q9H1K6 362 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 FAM96AQ9H5X1 160 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 WDR54Q9H977 334 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 HRASLSQ9HDD0 168 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 AGPAT4Q9NRZ5 378 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 MS4A12Q9NXJ0 267 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 SCN3BQ9NY72 215 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 MED11Q9P086 117 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 PDP1Q9P0J1 537 aaPredicted RBP1.94□□□□□ -2.1
PTPRC-205ENST00000391970 SLC35A3Q9Y2D2 325 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 ZFP30Q9Y2G7 519 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 TBL2Q9Y4P3 447 aaKnown RBP1.94□□□□□ -2.1
PTPRC-205ENST00000391970 WIF1Q9Y5W5 379 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 SIPA1L3O60292 1781 aaPredicted RBP1.94□□□□□ -2.1
PTPRC-205ENST00000391970 SBF1O95248 1867 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 COL1A2P08123 1366 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 DOCK5Q9H7D0 1870 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 RP1L1Q8IWN7 2480 aaPredicted RBP1.94□□□□□ -2.1
PTPRC-205ENST00000391970 TJP1Q07157 1748 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 FOCADQ5VW36 1801 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 DUOX1Q9NRD9 1551 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 STRCQ7RTU9 1775 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 UBR2Q8IWV8 1755 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 IGLV1-36A0A0B4J1U3 117 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 KBTBD11-OT1A0A1B0GTJ5 212 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 A0A1B0GVX0 72 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 A0A1B0GW55 424 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 A0A1W2PNU3 283 aaPredicted RBP1.93□□□□□ -2.1
PTPRC-205ENST00000391970 TCRBV3S1A0A5B6 114 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 OR11H12B2RN74 326 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 G3V3Q6 166 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 K7EMT4 169 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 DFFAO00273 331 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 KDELR3O43731 214 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 RDH16O75452 317 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 STK16O75716 305 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 VAMP5O95183 116 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 CTDNEP1O95476 244 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 C1QCP02747 245 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 OR56A5P0C7T3 313 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 DUX4L2P0CJ85 424 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 DUX4L3P0CJ86 424 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 DUX4L5P0CJ88 424 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 DUX4L6P0CJ89 424 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 DUX4L7P0CJ90 424 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 CD37P11049 281 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 CD79AP11912 226 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 KCNE1P15382 129 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 SPNP16150 400 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 ZNF7P17097 686 aaPredicted RBP1.93□□□□□ -2.1
PTPRC-205ENST00000391970 PGAM1P18669 254 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 IVDP26440 423 aa1.93□□□□□ -2.1
PTPRC-205ENST00000391970 ELK4P28324 431 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms