RNA–Protein interactions for RNA: ENST00000390495.1

TRAJ42-201, Transcript of T cell receptor alpha joining 42, humanhuman

APPRIS P1 BASIC

Gene TRAJ42, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ42-201ENST00000390495 SYCP3Q8IZU3 236 aa-4.16□□□□□ -3.08
TRAJ42-201ENST00000390495 OR4P4Q8NGL7 312 aa-4.16□□□□□ -3.08
TRAJ42-201ENST00000390495 OR5B3Q8NH48 314 aa-4.16□□□□□ -3.08
TRAJ42-201ENST00000390495 SCGB1C1Q8TD33 95 aa-4.16□□□□□ -3.08
TRAJ42-201ENST00000390495 REEP6Q96HR9 211 aa-4.16□□□□□ -3.08
TRAJ42-201ENST00000390495 FAAP24Q9BTP7 215 aa-4.16□□□□□ -3.08
TRAJ42-201ENST00000390495 STMN4Q9H169 189 aaPredicted RBP-4.16□□□□□ -3.08
TRAJ42-201ENST00000390495 RIBC2Q9H4K1 309 aa-4.16□□□□□ -3.08
TRAJ42-201ENST00000390495 C11orf49Q9H6J7 331 aa-4.16□□□□□ -3.08
TRAJ42-201ENST00000390495 INSIG2Q9Y5U4 225 aa-4.16□□□□□ -3.08
TRAJ42-201ENST00000390495 U3KQ87 197 aa-4.16□□□□□ -3.08
TRAJ42-201ENST00000390495 VPS13BQ7Z7G8 4022 aa-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 FLOT1O75955 427 aa-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 MBD3O95983 291 aa-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 RALBP11234 206 aa-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 LAP3P28838 519 aa-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 KCNJ3P48549 501 aa-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 STXBP1P61764 594 aaKnown RBP-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 OR1Q1Q15612 314 aa-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 KCNJ8Q15842 424 aa-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 IMMTQ16891 758 aaKnown RBP-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 C1orf122Q6ZSJ8 110 aa-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 TAF8Q7Z7C8 310 aa-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 SLC13A5Q86YT5 568 aaPredicted RBP-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 CYP4Z2PQ8N1L4 340 aa-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 RNF148Q8N7C7 305 aa-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 OR4D11Q8NGI4 311 aa-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 NAT6Q93015 286 aa-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 PPWD1Q96BP3 646 aaKnown RBP-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 SGTBQ96EQ0 304 aa-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 NXF2Q9GZY0 626 aaKnown RBP-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 ASB7Q9H672 318 aa-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 NMRAL1Q9HBL8 299 aa-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 BLOC1S4Q9NUP1 217 aa-4.17□□□□□ -3.08
TRAJ42-201ENST00000390495 IGLV3-32A0A0A0MS00 114 aa-4.18□□□□□ -3.08
TRAJ42-201ENST00000390495 A0A1W2PPV9 198 aa-4.18□□□□□ -3.08
TRAJ42-201ENST00000390495 INMT-MINDY4F8WBC2 141 aa-4.18□□□□□ -3.08
TRAJ42-201ENST00000390495 POLR3GO15318 223 aaPredicted RBP-4.18□□□□□ -3.08
TRAJ42-201ENST00000390495 FADS1O60427 444 aa-4.18□□□□□ -3.08
TRAJ42-201ENST00000390495 HPRT1P00492 218 aa-4.18□□□□□ -3.08
TRAJ42-201ENST00000390495 RLN2P04090 185 aa-4.18□□□□□ -3.08
TRAJ42-201ENST00000390495 RHOCP08134 193 aa-4.18□□□□□ -3.08
TRAJ42-201ENST00000390495 MRPS22P82650 360 aaKnown RBP-4.18□□□□□ -3.08
TRAJ42-201ENST00000390495 TPTE2P1Q5T6R2 138 aa-4.18□□□□□ -3.08
TRAJ42-201ENST00000390495 OOSP2Q86WS3 158 aa-4.18□□□□□ -3.08
TRAJ42-201ENST00000390495 CBLN2Q8IUK8 224 aa-4.18□□□□□ -3.08
TRAJ42-201ENST00000390495 BCORP1Q8N888 145 aa-4.18□□□□□ -3.08
TRAJ42-201ENST00000390495 FAM71CQ8NEG0 241 aa-4.18□□□□□ -3.08
TRAJ42-201ENST00000390495 FNDC9Q8TBE3 224 aa-4.18□□□□□ -3.08
TRAJ42-201ENST00000390495 PLEKHA8Q96JA3 519 aa-4.18□□□□□ -3.08
TRAJ42-201ENST00000390495 THUMPD2Q9BTF0 503 aaKnown RBP-4.18□□□□□ -3.08
TRAJ42-201ENST00000390495 TRIM10Q9UDY6 481 aa-4.18□□□□□ -3.08
TRAJ42-201ENST00000390495 FLT4P35916 1363 aa-4.18□□□□□ -3.08
TRAJ42-201ENST00000390495 BIVM-ERCC5R4GMW8 1640 aa-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 LOC389332A0A1B0GUA5 103 aa-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 GABRPO00591 440 aa-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 ATP8B1O43520 1251 aa-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 SLC16A7O60669 478 aa-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 IGHV1-69P01742 117 aa-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 PMP2P02689 132 aa-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 GTF2H1P32780 548 aa-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 TSPEAR-AS2P59090 65 aa-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 HIST1H4AP62805 103 aaKnown RBP-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 DEFA5Q01523 94 aa-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 TMEM95Q3KNT9 176 aa-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 UBE2NLQ5JXB2 153 aa-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 CFAP58Q5T655 872 aa-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 TMA16Q96EY4 203 aaKnown RBP-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 EEF2KMTQ96G04 330 aa-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 MMADHCQ9H3L0 296 aaPredicted RBP-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 SLC2A9Q9NRM0 540 aa-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 TMEM100Q9NV29 134 aa-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 TAS2R4Q9NYW5 299 aa-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 LSM7Q9UK45 103 aaKnown RBP-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 KIF24Q5T7B8 1368 aa-4.19□□□□□ -3.08
TRAJ42-201ENST00000390495 TRBV2A0A0J9YWF9 115 aa-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 A0A0U1RQV5 110 aa-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 TRBV6-4A0A1B0GX49 114 aa-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 LOC105371045A0A1W2PR82 267 aa-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 SSX5O60225 188 aa-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 PTHP01270 115 aa-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 PSMB2P49721 201 aa-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 EIF3EP60228 445 aaKnown RBP-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 PDK2Q15119 407 aa-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 NADK2Q4G0N4 442 aa-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 SHQ1Q6PI26 577 aaKnown RBP-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 HAGHLQ6PII5 290 aaPredicted RBP-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 ZNF619Q8N2I2 560 aa-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 LINC00311Q8N616 119 aa-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 CNEP1R1Q8N9A8 125 aa-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 TESCQ96BS2 214 aa-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 FAM19A4Q96LR4 140 aa-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 JSRP1Q96MG2 331 aaPredicted RBP-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 SLC38A2Q96QD8 506 aa-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 CCL19Q99731 98 aa-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 CYP4F30PQ9H0H9 118 aa-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 SNX12Q9UMY4 172 aa-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 PNPLA6Q8IY17 1366 aa-4.2□□□□□ -3.08
TRAJ42-201ENST00000390495 GREB1Q4ZG55 1949 aa-4.21□□□□□ -3.08
TRAJ42-201ENST00000390495 KIAA0100Q14667 2235 aaKnown RBP-4.21□□□□□ -3.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms