RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 KIR2DS5Q14953 304 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 MPV17LQ2QL34 196 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 LRRC75BQ2VPJ9 315 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 TMEM249Q2WGJ8 235 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 BSXQ3C1V8 233 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 SNAI3Q3KNW1 292 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 PIGYQ3MUY2 71 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 AARDQ4LEZ3 155 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 TMEM41BQ5BJD5 291 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 PCSK4Q6UW60 755 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 TMEM14EPQ6UXP3 125 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 ZNF66Q6ZN08 573 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 ZNF818PQ6ZRF7 136 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 NUFIP2Q7Z417 695 aaKnown RBP2.94□□□□□ -1.94
TRAV39-201ENST00000390466 P4HA3Q7Z4N8 544 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 CPEB2Q7Z5Q1 589 aaKnown RBP2.94□□□□□ -1.94
TRAV39-201ENST00000390466 TBC1D26Q86UD7 250 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 OOSP2Q86WS3 158 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 C17orf82Q86X59 251 aaPredicted RBP2.94□□□□□ -1.94
TRAV39-201ENST00000390466 MRPL41Q8IXM3 137 aaKnown RBP2.94□□□□□ -1.94
TRAV39-201ENST00000390466 CISD2Q8N5K1 135 aaKnown RBP2.94□□□□□ -1.94
TRAV39-201ENST00000390466 RPP25LQ8N5L8 163 aaKnown RBP2.94□□□□□ -1.94
TRAV39-201ENST00000390466 METTL27Q8N6F8 245 aaPredicted RBP2.94□□□□□ -1.94
TRAV39-201ENST00000390466 IL22RA1Q8N6P7 574 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 STPG4Q8N801 248 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 CCDC71LQ8N9Z2 235 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 ZNF114Q8NC26 417 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 NFAM1Q8NET5 270 aaPredicted RBP2.94□□□□□ -1.94
TRAV39-201ENST00000390466 NPRL2Q8WTW4 380 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 KCNE4Q8WWG9 221 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 ZCCHC14Q8WYQ9 949 aaKnown RBP2.94□□□□□ -1.94
TRAV39-201ENST00000390466 NAT6Q93015 286 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 HLA-CQ95604 372 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 TMEM54Q969K7 222 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 TOMM40LQ969M1 308 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 SPSB1Q96BD6 273 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 GPR146Q96CH1 333 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 WDYHV1Q96HA8 205 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 TBX15Q96SF7 602 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 SPIN2AQ99865 258 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 SPIN2BQ9BPZ2 258 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 SMIM7Q9BQ49 75 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 KRTAP9-8Q9BYQ0 159 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 STRADBQ9C0K7 418 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 OR2J1Q9GZK6 312 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 MAP1LC3BQ9GZQ8 125 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 WDR61Q9GZS3 305 aaKnown RBP2.94□□□□□ -1.94
TRAV39-201ENST00000390466 MAGT1Q9H0U3 335 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 PARLQ9H300 379 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 OR51B6Q9H340 312 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 ZNF286AQ9HBT8 521 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 DNAJC4Q9NNZ3 241 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 ASCL3Q9NQ33 180 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 GPR173Q9NS66 373 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 FKBP11Q9NYL4 201 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 CRIM1Q9NZV1 1036 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 GNG13Q9P2W3 67 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 PRSS50Q9UI38 385 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 ZFP30Q9Y2G7 519 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 TIMM9Q9Y5J7 89 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 KNTC1P50748 2209 aa2.94□□□□□ -1.94
TRAV39-201ENST00000390466 DSCAMO60469 2012 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 TMEM265A0A087WTH1 108 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 SAA2-SAA4A0A096LPE2 208 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 TRBV6-6A0A0A6YYG2 114 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 TRAV39A0A0B4J263 110 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 hCG_38984A0A1B0GV85 526 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 TCRBV21S2A2A0A5A6 115 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 LNP1A1A4G5 178 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 NKX6-3A6NJ46 265 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 AQP7P3A6NL99 342 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 ZFP92A6NM28 416 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 CEBPZOSA8MTT3 80 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 ZNF705GA8MUZ8 300 aaPredicted RBP2.93□□□□□ -1.94
TRAV39-201ENST00000390466 SHISA8B8ZZ34 492 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 NPIPB11E5RHQ5 1161 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 F2Z2F3 143 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 C5orf67F2Z3F1 127 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 CCL25O15444 150 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 RBFOX2O43251 390 aaKnown RBP eCLIP2.93□□□□□ -1.94
TRAV39-201ENST00000390466 SPRY1O43609 319 aaPredicted RBP2.93□□□□□ -1.94
TRAV39-201ENST00000390466 SYNGR3O43761 229 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 CHST1O43916 411 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 VENTXO95231 258 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 TIAF1O95411 115 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 SYNGR4O95473 234 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 IGKV1-5P01602 117 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 IGLV2-14P01704 120 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 GYPAP02724 150 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 PPBPP02775 128 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 IGHV4-34P06331 123 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 CST2P09228 141 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 MMP7P09237 267 aaPredicted RBP2.93□□□□□ -1.94
TRAV39-201ENST00000390466 CD99P14209 185 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 HOXB2P14652 356 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 CD33P20138 364 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 IL12BP29460 328 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 ADMP35318 185 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 CDKN1BP46527 198 aa2.93□□□□□ -1.94
TRAV39-201ENST00000390466 CAPZBP47756 277 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms