RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 TRAT1Q6PIZ9 186 aa16.33■□□□□ 0.2
CCM2-202ENST00000381112 NEU4Q8WWR8 484 aaPredicted RBP16.33■□□□□ 0.2
CCM2-202ENST00000381112 FYTTD1Q96QD9 318 aaKnown RBP16.33■□□□□ 0.2
CCM2-202ENST00000381112 FSTL3O95633 263 aa16.32■□□□□ 0.2
CCM2-202ENST00000381112 RPS2P15880 293 aaKnown RBP16.32■□□□□ 0.2
CCM2-202ENST00000381112 VAMP1P23763 118 aa16.32■□□□□ 0.2
CCM2-202ENST00000381112 EDDM3BP56851 147 aa16.32■□□□□ 0.2
CCM2-202ENST00000381112 SUPT4H1P63272 117 aaKnown RBP16.32■□□□□ 0.2
CCM2-202ENST00000381112 MRPS11P82912 194 aaKnown RBP16.32■□□□□ 0.2
CCM2-202ENST00000381112 SLC38A6Q8IZM9 456 aa16.32■□□□□ 0.2
CCM2-202ENST00000381112 GALMQ96C23 342 aa16.32■□□□□ 0.2
CCM2-202ENST00000381112 RSRP1Q9BUV0 290 aa16.32■□□□□ 0.2
CCM2-202ENST00000381112 DLL4Q9NR61 685 aa16.32■□□□□ 0.2
CCM2-202ENST00000381112 OPN4Q9UHM6 478 aa16.32■□□□□ 0.2
CCM2-202ENST00000381112 SPTAN1Q13813 2472 aaKnown RBP16.32■□□□□ 0.2
CCM2-202ENST00000381112 C15orf65H3BRN8 121 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 SSTR5P35346 364 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 C12orf45Q8N5I9 185 aaPredicted RBP16.31■□□□□ 0.2
CCM2-202ENST00000381112 SPICQ8N5J4 248 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 OR2AK2Q8NG84 335 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 MITD1Q8WV92 249 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 TMEM246Q9BRR3 403 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 OR2W1Q9Y3N9 320 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 LRBAP50851 2863 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 IGKV1D-13A0A0B4J2D9 117 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 DUS4LO95620 317 aaKnown RBP16.31■□□□□ 0.2
CCM2-202ENST00000381112 IGKV1-13P0DP09 117 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 GZMHP20718 246 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 KCNJ8Q15842 424 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 TCTE3Q8IZS6 198 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 ZNF565Q8N9K5 539 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 ARL11Q969Q4 196 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 C14orf79Q96F83 325 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 OR6C3Q9NZP0 311 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 MGAT4CQ9UBM8 478 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 KAAG1Q9UBP8 84 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 COL12A1Q99715 3063 aa16.31■□□□□ 0.2
CCM2-202ENST00000381112 TANC2Q9HCD6 1990 aa16.3■□□□□ 0.2
CCM2-202ENST00000381112 MEX3AA1L020 520 aaKnown RBP16.3■□□□□ 0.2
CCM2-202ENST00000381112 DSCAMO60469 2012 aa16.3■□□□□ 0.2
CCM2-202ENST00000381112 LY6HO94772 140 aa16.3■□□□□ 0.2
CCM2-202ENST00000381112 SFT2D2O95562 160 aa16.3■□□□□ 0.2
CCM2-202ENST00000381112 GNRHRP30968 328 aa16.3■□□□□ 0.2
CCM2-202ENST00000381112 IL2RGP31785 369 aa16.3■□□□□ 0.2
CCM2-202ENST00000381112 C2orf68Q2NKX9 166 aa16.3■□□□□ 0.2
CCM2-202ENST00000381112 LPCAT3Q6P1A2 487 aa16.3■□□□□ 0.2
CCM2-202ENST00000381112 LYPD2Q6UXB3 125 aa16.3■□□□□ 0.2
CCM2-202ENST00000381112 LDLRAD3Q86YD5 345 aa16.3■□□□□ 0.2
CCM2-202ENST00000381112 FGFRL1Q8N441 504 aa16.3■□□□□ 0.2
CCM2-202ENST00000381112 RDH8Q9NYR8 311 aa16.3■□□□□ 0.2
CCM2-202ENST00000381112 HSPA12AO43301 675 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 ADAM20O43506 726 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 NDUFA2O43678 99 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 FCN3O75636 299 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 CGB3P0DN86 165 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 CGB7P0DN87 165 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 CD34P28906 385 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 PIGPP57054 158 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 CLEC18BQ6UXF7 455 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 UXS1Q8NBZ7 420 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 ZNF486Q96H40 463 aaPredicted RBP16.29■□□□□ 0.2
CCM2-202ENST00000381112 CLEC4MQ9H2X3 399 aaPredicted RBP16.29■□□□□ 0.2
CCM2-202ENST00000381112 SLC2A9Q9NRM0 540 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 SLC25A10Q9UBX3 287 aaPredicted RBP16.29■□□□□ 0.2
CCM2-202ENST00000381112 CRYM-AS1A6NIL9 109 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 SPINT2O43291 252 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 ANXA3P12429 323 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 CEACAM6P40199 344 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 ABCA11PQ4W5N1 156 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 CASTOR1Q8WTX7 329 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 SECTM1Q8WVN6 248 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 DMRTB1Q96MA1 342 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 SLC5A7Q9GZV3 580 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 TOLLIPQ9H0E2 274 aa16.29■□□□□ 0.2
CCM2-202ENST00000381112 IGHV2-70P01814 119 aa16.28■□□□□ 0.2
CCM2-202ENST00000381112 DAOP14920 347 aa16.28■□□□□ 0.2
CCM2-202ENST00000381112 HTD2P86397 168 aa16.28■□□□□ 0.2
CCM2-202ENST00000381112 TLE4Q04727 773 aa16.28■□□□□ 0.2
CCM2-202ENST00000381112 PHLDA2Q53GA4 152 aa16.28■□□□□ 0.2
CCM2-202ENST00000381112 OR52L2PQ8NGH6 319 aa16.28■□□□□ 0.2
CCM2-202ENST00000381112 RFESDQ8TAC1 157 aa16.28■□□□□ 0.2
CCM2-202ENST00000381112 PHB2Q99623 299 aa16.28■□□□□ 0.2
CCM2-202ENST00000381112 ZNF436Q9C0F3 470 aaPredicted RBP16.28■□□□□ 0.2
CCM2-202ENST00000381112 PARP12Q9H0J9 701 aaKnown RBP16.28■□□□□ 0.2
CCM2-202ENST00000381112 CTSZQ9UBR2 303 aa16.28■□□□□ 0.2
CCM2-202ENST00000381112 NDUFB7P17568 137 aa16.27■□□□□ 0.2
CCM2-202ENST00000381112 CDKN1AP38936 164 aa16.27■□□□□ 0.2
CCM2-202ENST00000381112 SLC9A3R2Q15599 337 aa16.27■□□□□ 0.2
CCM2-202ENST00000381112 TCF23Q7RTU1 214 aa16.27■□□□□ 0.2
CCM2-202ENST00000381112 SGPP2Q8IWX5 399 aa16.27■□□□□ 0.2
CCM2-202ENST00000381112 RTN4IP1Q8WWV3 396 aaPredicted RBP16.27■□□□□ 0.2
CCM2-202ENST00000381112 PLEKHF2Q9H8W4 249 aa16.27■□□□□ 0.2
CCM2-202ENST00000381112 FAM208BQ5VWN6 2430 aa16.27■□□□□ 0.2
CCM2-202ENST00000381112 GNMTQ14749 295 aa16.27■□□□□ 0.19
CCM2-202ENST00000381112 FAM53AQ6NSI3 398 aaPredicted RBP16.27■□□□□ 0.19
CCM2-202ENST00000381112 ZNF818PQ6ZRF7 136 aa16.27■□□□□ 0.19
CCM2-202ENST00000381112 OR10V1Q8NGI7 309 aa16.27■□□□□ 0.19
CCM2-202ENST00000381112 CORO2AQ92828 525 aa16.27■□□□□ 0.19
CCM2-202ENST00000381112 NAA60Q9H7X0 242 aa16.27■□□□□ 0.19
CCM2-202ENST00000381112 CCL28Q9NRJ3 127 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms