RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 NALCNQ8IZF0 1738 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 IGHV3OR15-7A0A075B7D8 119 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 IGKV3OR2-268A0A0C4DH90 116 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 HOXB3P14651 431 aaPredicted RBP9.51□□□□□ -0.89
CLCN4-202ENST00000380833 TNXAQ16473 311 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 ZNF764Q96H86 408 aaPredicted RBP9.51□□□□□ -0.89
CLCN4-202ENST00000380833 OR2V2Q96R30 315 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 FIZ1Q96SL8 496 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 TMEM167BQ9NRX6 74 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 DAPP1Q9UN19 280 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 EGR3Q06889 387 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 KLF9Q13886 244 aaPredicted RBP9.51□□□□□ -0.89
CLCN4-202ENST00000380833 POU2AF1Q16633 256 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 HIKESHIQ53FT3 197 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 TMEM196Q5HYL7 178 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 NR2C2APQ86WQ0 139 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 TEX37Q96LM6 180 aa9.51□□□□□ -0.89
CLCN4-202ENST00000380833 A0A1W2PP11 408 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 TMEM189A5PLL7 270 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 CCL21O00585 134 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 SRSF10O75494 262 aaKnown RBP9.5□□□□□ -0.89
CLCN4-202ENST00000380833 IGHA2P01877 340 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 CLDN18P56856 261 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 STARD6P59095 220 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 RELBQ01201 579 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 ZNF141Q15928 474 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 OR2V1Q8NHB1 315 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 GPR183P32249 361 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 RPS4Y2Q8TD47 263 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 GALMQ96C23 342 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 WNT10AQ9GZT5 417 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 PBOV1Q9GZY1 135 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 CMC2Q9NRP2 79 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 CCL27Q9Y4X3 112 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 RGPD1P0DJD0 1748 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 C7orf71A4D174 169 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 ADAM20O43506 726 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 LSM11P83369 360 aaKnown RBP eCLIP9.5□□□□□ -0.89
CLCN4-202ENST00000380833 TMEM147Q9BVK8 224 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 PRDM14Q9GZV8 571 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 ZFP64Q9NPA5 681 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 IGSF23A1L1A6 192 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 RER1O15258 196 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 GPR3P46089 330 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 ATRAIDQ6UW56 229 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 OR1B1Q8NGR6 318 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 TSPAN32Q96QS1 320 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 SPANXCQ9NY87 97 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 KCNMB2Q9Y691 235 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 SLC17A2O00624 439 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 P01737 135 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 KLK2P20151 261 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 CEACAM6P40199 344 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 OR4C3Q8NH37 302 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 CLDN23Q96B33 292 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 USP3Q9Y6I4 520 aa9.5□□□□□ -0.89
CLCN4-202ENST00000380833 ZBTB25P24278 435 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 CAPZBP47756 277 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 ANKRD55Q3KP44 614 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 CST9LQ9H4G1 147 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 TMEFF2Q9UIK5 374 aaPredicted RBP9.49□□□□□ -0.89
CLCN4-202ENST00000380833 YBX2Q9Y2T7 364 aaKnown RBP9.49□□□□□ -0.89
CLCN4-202ENST00000380833 A0A0G2JMM0 328 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 A0A1W2PPB8 328 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 KIR3DP1A8MWS1 328 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 TMEM238C9JI98 176 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 NDUFA2O43678 99 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 HOXA4Q00056 320 aaPredicted RBP9.49□□□□□ -0.89
CLCN4-202ENST00000380833 FAM27D1Q5T7N8 215 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 DGAT2L7PQ6IED9 249 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 KTI12Q96EK9 354 aaPredicted RBP9.49□□□□□ -0.89
CLCN4-202ENST00000380833 P2RX4Q99571 388 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 CHST5Q9GZS9 411 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 AAMDCQ9H7C9 122 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 GABRG2P18507 467 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 FUT3P21217 361 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 TSPAN7P41732 249 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 MMDQ15546 238 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 SP6Q3SY56 376 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 SLC25A42Q86VD7 318 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 GAPDHP04406 335 aaKnown RBP9.49□□□□□ -0.89
CLCN4-202ENST00000380833 ISG15P05161 165 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 CCR5P51681 352 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 C9orf153Q5TBE3 101 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 SLC6A13Q9NSD5 602 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 PPIAL4EA0A075B759 164 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 PAGE4O60829 102 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 PPIAL4FP0DN26 164 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 CD22P20273 847 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 BAHD1Q8TBE0 780 aaPredicted RBP9.49□□□□□ -0.89
CLCN4-202ENST00000380833 OXGR1Q96P68 337 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 SDF2Q99470 211 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 EDA2RQ9HAV5 297 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 MMP25Q9NPA2 562 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 PPIAL4AQ9Y536 164 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 NAV1Q8NEY1 1877 aa9.49□□□□□ -0.89
CLCN4-202ENST00000380833 CDKN1BP46527 198 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 SHBQ15464 509 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 CGB1A6NKQ9 187 aa9.48□□□□□ -0.89
CLCN4-202ENST00000380833 PSG1P11464 419 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms