RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ADH5P11766 374 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 ALOX5APP20292 161 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 PPOXP50336 477 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 PIGPP57054 158 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 PPP1CBP62140 327 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 MRPS34P82930 218 aaKnown RBP8.1□□□□□ -1.11
PTPRA-204ENST00000380393 DMWDQ09019 674 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 CD300EQ496F6 205 aaPredicted RBP8.1□□□□□ -1.11
PTPRA-204ENST00000380393 ZNF787Q6DD87 383 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 C22orf39Q6P5X5 142 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 LCN15Q6UWW0 184 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 NUP43Q8NFH3 380 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 OR5A2Q8NGI9 324 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 OR5H2Q8NGV7 314 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 RNF166Q96A37 237 aaPredicted RBP8.1□□□□□ -1.11
PTPRA-204ENST00000380393 HHLA2Q9UM44 414 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 DAPP1Q9UN19 280 aa8.1□□□□□ -1.11
PTPRA-204ENST00000380393 LAMA1P25391 3075 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 F2Z2F3 143 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 GPX1P07203 203 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 HIST1H1CP16403 213 aaKnown RBP8.09□□□□□ -1.11
PTPRA-204ENST00000380393 ZNF20P17024 532 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 EWSR1Q01844 656 aaKnown RBP eCLIP8.09□□□□□ -1.11
PTPRA-204ENST00000380393 DLX2Q07687 328 aaPredicted RBP8.09□□□□□ -1.11
PTPRA-204ENST00000380393 OR13G1Q8NGZ3 307 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 ST6GALNAC6Q969X2 333 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 SIGLEC12Q96PQ1 595 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 KLF16Q9BXK1 252 aaPredicted RBP8.09□□□□□ -1.11
PTPRA-204ENST00000380393 LINC00470Q9BZP3 86 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 NDUFS4O43181 175 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 CD5LO43866 347 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 HPNP05981 417 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 BSGP35613 385 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 NKX2-1P43699 371 aaPredicted RBP8.09□□□□□ -1.11
PTPRA-204ENST00000380393 RRADP55042 308 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 POLR2LP62875 67 aaKnown RBP8.09□□□□□ -1.11
PTPRA-204ENST00000380393 PLAURQ03405 335 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 GGTLC2Q14390 218 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 FAM166AQ6J272 317 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 CENPVQ7Z7K6 275 aaPredicted RBP8.09□□□□□ -1.11
PTPRA-204ENST00000380393 OR4N5Q8IXE1 308 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 OR4N2Q8NGD1 307 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 OR10P1Q8NGE3 313 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 CYB5D2Q8WUJ1 264 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 VN1R1Q9GZP7 353 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 SLC7A10Q9NS82 523 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 TP73-AS1Q9UF72 201 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 TNRC6AQ8NDV7 1962 aaKnown RBP8.09□□□□□ -1.11
PTPRA-204ENST00000380393 ATG2BQ96BY7 2078 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 UPK3AO75631 287 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 C3orf79P0CE67 100 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 SLC35E2P0CK97 266 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 SLC6A6P31641 620 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 SFTPDP35247 375 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 TLE1Q04724 770 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 ZNF684Q5T5D7 378 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 SPATA31B1PQ5VZV4 182 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 OTPQ5XKR4 325 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 SP5Q6BEB4 398 aaPredicted RBP8.09□□□□□ -1.11
PTPRA-204ENST00000380393 UFSP1Q6NVU6 142 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 TNFRSF13CQ96RJ3 184 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 CHRNA10Q9GZZ6 450 aa8.09□□□□□ -1.11
PTPRA-204ENST00000380393 UBE2ZQ9H832 354 aaPredicted RBP8.09□□□□□ -1.11
PTPRA-204ENST00000380393 LSM7Q9UK45 103 aaKnown RBP8.09□□□□□ -1.11
PTPRA-204ENST00000380393 KIAA1549Q9HCM3 1950 aa8.09□□□□□ -1.12
PTPRA-204ENST00000380393 TEX48A0A1B0GUV7 120 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 FAM231BA6NCW3 169 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 WIPF3A6NGB9 483 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 ZNF133P52736 654 aaPredicted RBP8.08□□□□□ -1.12
PTPRA-204ENST00000380393 POU3F1Q03052 451 aaPredicted RBP8.08□□□□□ -1.12
PTPRA-204ENST00000380393 C12orf54Q6X4T0 127 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 ZNF595Q8IYB9 648 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 FBXL14Q8N1E6 418 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 SLC16A11Q8NCK7 471 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 RTN4IP1Q8WWV3 396 aaPredicted RBP8.08□□□□□ -1.12
PTPRA-204ENST00000380393 P2RX4Q99571 388 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 C6orf106Q9H6K1 298 aaPredicted RBP8.08□□□□□ -1.12
PTPRA-204ENST00000380393 PLEKHF2Q9H8W4 249 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 LRIT1Q9P2V4 623 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 JPT1Q9UK76 154 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 FRYLO94915 3013 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 MDC1Q14676 2089 aaKnown RBP8.08□□□□□ -1.12
PTPRA-204ENST00000380393 CENPVL1A0A0U1RR11 272 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 TMEM212A6NML5 194 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 KBTBD11O94819 623 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 CEBPBP17676 345 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 DTWD2Q8NBA8 298 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 SLC25A40Q8TBP6 338 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 C5orf30Q96GV9 206 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 HARBI1Q96MB7 349 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 GPER1Q99527 375 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 FAM24AA6NFZ4 105 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 LAMTOR5O43504 91 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 CLEC3AO75596 197 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 GPR75O95800 540 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 C1QTNF9P0C862 333 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 CFPP27918 469 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 MFGE8Q08431 387 aaPredicted RBP8.08□□□□□ -1.12
PTPRA-204ENST00000380393 LCN12Q6JVE5 192 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms