RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 ATXN7O15265 892 aaPredicted RBP9.94□□□□□ -0.82
PTCHD1-201ENST00000379361 SLC6A1P30531 599 aa9.94□□□□□ -0.82
PTCHD1-201ENST00000379361 ATP5J2P56134 94 aa9.94□□□□□ -0.82
PTCHD1-201ENST00000379361 PAPPA-AS1Q5QFB9 102 aa9.94□□□□□ -0.82
PTCHD1-201ENST00000379361 FHL5Q5TD97 284 aa9.94□□□□□ -0.82
PTCHD1-201ENST00000379361 RFESDQ8TAC1 157 aa9.94□□□□□ -0.82
PTCHD1-201ENST00000379361 ZNF384Q8TF68 577 aa9.94□□□□□ -0.82
PTCHD1-201ENST00000379361 NCOR2Q9Y618 2525 aa9.94□□□□□ -0.82
PTCHD1-201ENST00000379361 TIAL1Q01085 375 aaKnown RBP eCLIP9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 IL24Q13007 206 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 FGF14Q92915 247 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 A0A1B0GVG6 124 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 MFAP4P55083 255 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 DNLZQ5SXM8 178 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 NKAIN4Q8IVV8 208 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 RNF122Q9H9V4 155 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 H3BP45 60 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 DAOP14920 347 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 CLPPQ16740 277 aaPredicted RBP9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 SSMEM1Q8WWF3 244 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 IFITM10A6NMD0 228 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 FGF5P12034 268 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 ZFP36L2P47974 494 aaKnown RBP9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 LOC107984156A0A0G2JMH3 177 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 PRRT4C9JH25 899 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 CLDN34H7C241 214 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 CST4P01036 141 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 IGHV3-13P01766 116 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 IGHV3-7P01780 117 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 TMEM33P57088 247 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 SUMO2P61956 95 aaKnown RBP9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 ARL17AQ8IVW1 177 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 PITPNC1Q9UKF7 332 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 PDCD6O75340 191 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 LIMK1P53667 647 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 RPS20P60866 119 aaKnown RBP9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 GPR35Q9HC97 309 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 SMIM4Q8WVI0 70 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 TMEM37Q8WXS4 190 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 RBFOX2O43251 390 aaKnown RBP eCLIP9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 GCAP28676 217 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 GUSBP11Q6P575 273 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 ADAT3Q96EY9 351 aaPredicted RBP9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 PRR14Q9BWN1 585 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 GZMHP20718 246 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 FAM209AQ5JX71 171 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 QSER1Q2KHR3 1735 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 UPK1AO00322 258 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 NTMQ9P121 344 aa9.93□□□□□ -0.82
PTCHD1-201ENST00000379361 TMEM202A6NGA9 273 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 OR10D4PQ8NGN7 298 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 ARHGAP5-AS1Q96IT6 56 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 CNTD2Q9H8S5 307 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 PRSS50Q9UI38 385 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 FZD5Q13467 585 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 FAM78BQ5VT40 261 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 GAGE10A6NGK3 116 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 EMP1P54849 157 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 ANKRD37Q7Z713 158 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 DUSP21Q9H596 190 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 A8MWL6 223 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 M0QZK8 103 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 AP4M1O00189 453 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 GGCTO75223 188 aaKnown RBP9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 MSL2Q9HCI7 577 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 APELAP0DMC3 54 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 DYNLT3P51808 116 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 TEX101Q9BY14 249 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 ZNF462Q96JM2 2506 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 ZNF32P17041 273 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 RPL31P62899 125 aaKnown RBP9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 PRSS54Q6PEW0 395 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 OR2C3Q8N628 320 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 CCL4L1Q8NHW4 92 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 TMEM101Q96IK0 257 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 STARD10Q9Y365 291 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 FLG2Q5D862 2391 aaPredicted RBP9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 CXorf51AA0A1B0GTR3 108 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 SF3B5Q9BWJ5 86 aaKnown RBP9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 B4DEV8 164 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 FAM26EQ8N5C1 309 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 OR5AU1Q8NGC0 362 aa9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 MBNL1Q9NR56 388 aaKnown RBP9.92□□□□□ -0.82
PTCHD1-201ENST00000379361 SPTY2D1-AS1A0A0U1RR47 76 aa9.91□□□□□ -0.82
PTCHD1-201ENST00000379361 K7N7A8 449 aa9.91□□□□□ -0.82
PTCHD1-201ENST00000379361 C1orf220Q5T0J3 134 aa9.91□□□□□ -0.82
PTCHD1-201ENST00000379361 DYRK2Q92630 601 aa9.91□□□□□ -0.82
PTCHD1-201ENST00000379361 SMIM14Q96QK8 99 aa9.91□□□□□ -0.82
PTCHD1-201ENST00000379361 A0A0A6YYD5 115 aa9.91□□□□□ -0.82
PTCHD1-201ENST00000379361 FABP5Q01469 135 aa9.91□□□□□ -0.82
PTCHD1-201ENST00000379361 C10orf126Q8N4M7 172 aa9.91□□□□□ -0.82
PTCHD1-201ENST00000379361 TICRRQ7Z2Z1 1910 aa9.91□□□□□ -0.82
PTCHD1-201ENST00000379361 SBK3P0C264 359 aa9.91□□□□□ -0.82
PTCHD1-201ENST00000379361 OR51B2Q9Y5P1 312 aa9.91□□□□□ -0.82
PTCHD1-201ENST00000379361 LCTP09848 1927 aa9.91□□□□□ -0.82
PTCHD1-201ENST00000379361 IGKV3OR2-268A0A0C4DH90 116 aa9.91□□□□□ -0.82
PTCHD1-201ENST00000379361 CA2P00918 260 aa9.91□□□□□ -0.82
PTCHD1-201ENST00000379361 CD3DP04234 171 aa9.91□□□□□ -0.82
PTCHD1-201ENST00000379361 NUBP1P53384 320 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms