RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 EDDM3AQ14507 147 aa12.41□□□□□ -0.42
RAB3IP-203ENST00000378809 TESK1Q15569 626 aa12.41□□□□□ -0.42
RAB3IP-203ENST00000378809 HMGN3Q15651 99 aa12.41□□□□□ -0.42
RAB3IP-203ENST00000378809 SLC35E4Q6ICL7 350 aa12.41□□□□□ -0.42
RAB3IP-203ENST00000378809 PDZD9Q8IXQ8 264 aa12.41□□□□□ -0.42
RAB3IP-203ENST00000378809 FAM71E2Q8N5Q1 922 aa12.41□□□□□ -0.42
RAB3IP-203ENST00000378809 PRR7Q8TB68 274 aa12.41□□□□□ -0.42
RAB3IP-203ENST00000378809 MRGPRDQ8TDS7 321 aa12.41□□□□□ -0.42
RAB3IP-203ENST00000378809 ITLN1Q8WWA0 313 aa12.41□□□□□ -0.42
RAB3IP-203ENST00000378809 GALMQ96C23 342 aa12.41□□□□□ -0.42
RAB3IP-203ENST00000378809 USB1Q9BQ65 265 aaKnown RBP12.41□□□□□ -0.42
RAB3IP-203ENST00000378809 PPP1R3CQ9UQK1 317 aa12.41□□□□□ -0.42
RAB3IP-203ENST00000378809 IGHV3OR15-7A0A075B7D8 119 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 SRRM5B3KS81 715 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 NPIPB11E5RHQ5 1161 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 IFNL4K9M1U5 179 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 OR8U9P0C7N5 309 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 RRASP10301 218 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 TPT1P13693 172 aaKnown RBP12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 IL2RGP31785 369 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 CD177Q8N6Q3 437 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 OR8U1Q8NH10 309 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 OR1L1Q8NH94 360 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 COQ2Q96H96 371 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 OR2S2Q9NQN1 319 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 AUP1Q9Y679 476 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 PTPRQQ9UMZ3 2332 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 NKX2-6A6NCS4 301 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 OOEPA6NGQ2 149 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 C12orf77C9JDV5 145 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 H0Y980 276 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 PSG2P11465 335 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 PTAFRP25105 342 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 RPL12P30050 165 aaKnown RBP12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 GLIPR1P48060 266 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 C1QTNF12Q5T7M4 302 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 SELENOHQ8IZQ5 122 aaKnown RBP12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 GCSAMQ8N6F7 178 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 BVESQ8NE79 360 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 TMEM56Q96MV1 263 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 PARP12Q9H0J9 701 aaKnown RBP12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 TMEM56-RWDD3S4R434 201 aa12.4□□□□□ -0.42
RAB3IP-203ENST00000378809 ZGRF1Q86YA3 2104 aa12.39□□□□□ -0.43
RAB3IP-203ENST00000378809 TEX46H3BTG2 121 aa12.39□□□□□ -0.43
RAB3IP-203ENST00000378809 I3L521 148 aa12.39□□□□□ -0.43
RAB3IP-203ENST00000378809 HKR1P10072 659 aa12.39□□□□□ -0.43
RAB3IP-203ENST00000378809 ZNF16P17020 682 aaPredicted RBP12.39□□□□□ -0.43
RAB3IP-203ENST00000378809 F2RP25116 425 aa12.39□□□□□ -0.43
RAB3IP-203ENST00000378809 TNFAIP6P98066 277 aaPredicted RBP12.39□□□□□ -0.43
RAB3IP-203ENST00000378809 BSPH1Q075Z2 132 aa12.39□□□□□ -0.43
RAB3IP-203ENST00000378809 OR10Z1Q8NGY1 313 aa12.39□□□□□ -0.43
RAB3IP-203ENST00000378809 NINJ1Q92982 152 aa12.39□□□□□ -0.43
RAB3IP-203ENST00000378809 RBPMSQ93062 196 aaKnown RBP12.39□□□□□ -0.43
RAB3IP-203ENST00000378809 PHYHIPLQ96FC7 376 aa12.39□□□□□ -0.43
RAB3IP-203ENST00000378809 JKAMPQ9P055 326 aa12.39□□□□□ -0.43
RAB3IP-203ENST00000378809 PFDN2Q9UHV9 154 aa12.39□□□□□ -0.43
RAB3IP-203ENST00000378809 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 ST8SIA3O43173 380 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 ADAM20O43506 726 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 CDS2O95674 445 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 HBZP02008 142 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 HEXAP06865 529 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 SERPINE2P07093 398 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 TNFSF4P23510 183 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 UCP1P25874 307 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 CASP6P55212 293 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 SNTB1Q13884 538 aaKnown RBP12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 THOC7Q6I9Y2 204 aaKnown RBP12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 NUP37Q8NFH4 326 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 SHARPINQ9H0F6 387 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 SLC25A32Q9H2D1 315 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 ESRP2Q9H6T0 727 aaKnown RBP12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 CADP27708 2225 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 IGKV1D-17A0A075B6S4 117 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 DPRXA6NFQ7 191 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 E5RGE8 158 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 ATXN7O15265 892 aaPredicted RBP12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 THBDP07204 575 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 SSTR5P35346 364 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 ADAM5Q6NVV9 412 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 BAP18Q8IXM2 172 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 OR52L2PQ8NGH6 319 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 OR5D13Q8NGL4 314 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 LILRB1Q8NHL6 650 aaPredicted RBP12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 RNASE11Q8TAA1 199 aaKnown RBP12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 SPIN2AQ99865 258 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 SPIN2BQ9BPZ2 258 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 VKORC1Q9BQB6 163 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 ZFP57Q9NU63 452 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 NSG2Q9Y328 171 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 ARID1AO14497 2285 aa12.38□□□□□ -0.43
RAB3IP-203ENST00000378809 IGHV1-46P01743 117 aa12.37□□□□□ -0.43
RAB3IP-203ENST00000378809 CD80P33681 288 aa12.37□□□□□ -0.43
RAB3IP-203ENST00000378809 TOR2AQ5JU69 321 aa12.37□□□□□ -0.43
RAB3IP-203ENST00000378809 FAM201AQ5SY85 155 aa12.37□□□□□ -0.43
RAB3IP-203ENST00000378809 OR13A1Q8NGR1 328 aa12.37□□□□□ -0.43
RAB3IP-203ENST00000378809 RFESDQ8TAC1 157 aa12.37□□□□□ -0.43
RAB3IP-203ENST00000378809 STOML3Q8TAV4 291 aa12.37□□□□□ -0.43
RAB3IP-203ENST00000378809 DMRTA2Q96SC8 542 aa12.37□□□□□ -0.43
RAB3IP-203ENST00000378809 SMIM3Q9BZL3 60 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms