RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 RAC3P60763 192 aa12.74□□□□□ -0.37
PRDM16-203ENST00000378391 UBE2V2Q15819 145 aa12.74□□□□□ -0.37
PRDM16-203ENST00000378391 HLA-DRB5Q30154 266 aa12.74□□□□□ -0.37
PRDM16-203ENST00000378391 MUC15Q8N387 334 aa12.74□□□□□ -0.37
PRDM16-203ENST00000378391 COPS9Q8WXC6 57 aa12.74□□□□□ -0.37
PRDM16-203ENST00000378391 PIPOXQ9P0Z9 390 aa12.74□□□□□ -0.37
PRDM16-203ENST00000378391 AMDHD2Q9Y303 409 aa12.74□□□□□ -0.37
PRDM16-203ENST00000378391 LIPT2A6NK58 231 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 LINC00587B1AMM8 73 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 C2CD4DB7Z1M9 353 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 E9PQ18 207 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 GYPAP02724 150 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 MICBQ29980 383 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 TBC1D26Q86UD7 250 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 WFDC8Q8IUA0 241 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 CHRNA10Q9GZZ6 450 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 GPR27Q9NS67 375 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 ZNF646O15015 1829 aaPredicted RBP12.73□□□□□ -0.37
PRDM16-203ENST00000378391 SEC16AO15027 2179 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 OR1C1Q15619 314 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 OR10A7Q8NGE5 316 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 OR10D3Q8NH80 312 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 RFESDQ8TAC1 157 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 ADAT3Q96EY9 351 aaPredicted RBP12.73□□□□□ -0.37
PRDM16-203ENST00000378391 RSPO3Q9BXY4 272 aaPredicted RBP12.73□□□□□ -0.37
PRDM16-203ENST00000378391 RAB33BQ9H082 229 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 RRP8O43159 456 aaKnown RBP12.73□□□□□ -0.37
PRDM16-203ENST00000378391 FAM78BQ5VT40 261 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 GABRG3Q99928 467 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 PRSS50Q9UI38 385 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 CHST1O43916 411 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 VSIG8P0DPA2 414 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 GCSHP23434 173 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 EPHA8P29322 1005 aaPredicted RBP12.73□□□□□ -0.37
PRDM16-203ENST00000378391 KIR2DS2P43631 304 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 GAS1P54826 345 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 DLK1P80370 383 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 VAX2Q9UIW0 290 aa12.73□□□□□ -0.37
PRDM16-203ENST00000378391 A0A0G2JK05 382 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 TRDCB7Z8K6 153 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 TNFSF15O95150 251 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 ZNF660Q6AZW8 331 aaPredicted RBP12.72□□□□□ -0.37
PRDM16-203ENST00000378391 SLC36A1Q7Z2H8 476 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 SLC25A38Q96DW6 304 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 FGF8P55075 233 aaPredicted RBP12.72□□□□□ -0.37
PRDM16-203ENST00000378391 MFAP4P55083 255 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 GGTLC2Q14390 218 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 ACER2Q5QJU3 275 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.72□□□□□ -0.37
PRDM16-203ENST00000378391 UBALD2Q8IYN6 164 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 COX6CP09669 75 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 ZAR1Q86SH2 424 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 TDHQ8IZJ6 230 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 MRPL24Q96A35 216 aaKnown RBP12.72□□□□□ -0.37
PRDM16-203ENST00000378391 SF3B5Q9BWJ5 86 aaKnown RBP12.72□□□□□ -0.37
PRDM16-203ENST00000378391 SMDT1Q9H4I9 107 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 SH2D2AQ9NP31 389 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 SCN10AQ9Y5Y9 1956 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 TMEM238LA0A1B0GVL6 79 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 A6NJY4 79 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 FAM74A7A6NL05 159 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 ZNF729A6NN14 1252 aaPredicted RBP12.72□□□□□ -0.37
PRDM16-203ENST00000378391 PPYP01298 95 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 ERVS71-1P61550 626 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 FAM74A3Q4VXF1 159 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 C16orf47Q6ZP98 133 aaPredicted RBP12.72□□□□□ -0.37
PRDM16-203ENST00000378391 OR2Z1Q8NG97 314 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 ZNF48Q96MX3 618 aaPredicted RBP12.72□□□□□ -0.37
PRDM16-203ENST00000378391 AAMDCQ9H7C9 122 aa12.72□□□□□ -0.37
PRDM16-203ENST00000378391 AREGP15514 252 aa12.71□□□□□ -0.37
PRDM16-203ENST00000378391 FCARP24071 287 aa12.71□□□□□ -0.37
PRDM16-203ENST00000378391 HTR1DP28221 377 aa12.71□□□□□ -0.37
PRDM16-203ENST00000378391 PPP1CAP62136 330 aa12.71□□□□□ -0.37
PRDM16-203ENST00000378391 ADIPOQQ15848 244 aa12.71□□□□□ -0.37
PRDM16-203ENST00000378391 TSPO2Q5TGU0 170 aa12.71□□□□□ -0.37
PRDM16-203ENST00000378391 ACSM6Q6P461 480 aa12.71□□□□□ -0.37
PRDM16-203ENST00000378391 PLPPR2Q96GM1 343 aa12.71□□□□□ -0.37
PRDM16-203ENST00000378391 ASCL3Q9NQ33 180 aa12.71□□□□□ -0.37
PRDM16-203ENST00000378391 NPDC1Q9NQX5 325 aaPredicted RBP12.71□□□□□ -0.37
PRDM16-203ENST00000378391 IGKV1-8A0A0C4DH67 115 aa12.71□□□□□ -0.37
PRDM16-203ENST00000378391 SLC25A5P05141 298 aaKnown RBP12.71□□□□□ -0.37
PRDM16-203ENST00000378391 NANOS3P60323 173 aaKnown RBP12.71□□□□□ -0.37
PRDM16-203ENST00000378391 PRR13Q9NZ81 148 aa12.71□□□□□ -0.37
PRDM16-203ENST00000378391 NDUFB3O43676 98 aa12.71□□□□□ -0.37
PRDM16-203ENST00000378391 RPS4Y1P22090 263 aaKnown RBP12.71□□□□□ -0.37
PRDM16-203ENST00000378391 LRRC10Q5BKY1 277 aa12.71□□□□□ -0.37
PRDM16-203ENST00000378391 TMEM211Q6ICI0 200 aa12.71□□□□□ -0.37
PRDM16-203ENST00000378391 CXorf67Q86X51 503 aaPredicted RBP12.71□□□□□ -0.37
PRDM16-203ENST00000378391 LYG1Q8N1E2 194 aa12.71□□□□□ -0.37
PRDM16-203ENST00000378391 PLA2G2FQ9BZM2 168 aa12.71□□□□□ -0.37
PRDM16-203ENST00000378391 TINAGQ9UJW2 476 aa12.71□□□□□ -0.37
PRDM16-203ENST00000378391 DNAJC13O75165 2243 aa12.71□□□□□ -0.37
PRDM16-203ENST00000378391 PRSS1P07477 247 aa12.71□□□□□ -0.38
PRDM16-203ENST00000378391 PRF1P14222 555 aa12.71□□□□□ -0.38
PRDM16-203ENST00000378391 MEGF9Q9H1U4 602 aa12.71□□□□□ -0.38
PRDM16-203ENST00000378391 HIST1H1EP10412 219 aaKnown RBP12.71□□□□□ -0.38
PRDM16-203ENST00000378391 TPRP12270 2363 aaKnown RBP12.71□□□□□ -0.38
PRDM16-203ENST00000378391 ZNF506Q5JVG8 444 aa12.71□□□□□ -0.38
PRDM16-203ENST00000378391 SSX8Q7RTT4 187 aa12.71□□□□□ -0.38
PRDM16-203ENST00000378391 MRGPRGQ86SM5 289 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms