RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 LOC390937A0A1W2PQ73 354 aa17.04■□□□□ 0.32
PCDH8-202ENST00000377942 FAM157AC9JC47 383 aa17.04■□□□□ 0.32
PCDH8-202ENST00000377942 RAB29O14966 203 aa17.04■□□□□ 0.32
PCDH8-202ENST00000377942 CHST1O43916 411 aa17.04■□□□□ 0.32
PCDH8-202ENST00000377942 ZFP36L1Q07352 338 aaKnown RBP17.04■□□□□ 0.32
PCDH8-202ENST00000377942 ZNF714Q96N38 554 aa17.04■□□□□ 0.32
PCDH8-202ENST00000377942 SIGLEC12Q96PQ1 595 aa17.03■□□□□ 0.32
PCDH8-202ENST00000377942 SH2D7A6NKC9 451 aaPredicted RBP17.03■□□□□ 0.32
PCDH8-202ENST00000377942 OR1L8Q8NGR8 309 aa17.03■□□□□ 0.32
PCDH8-202ENST00000377942 FLVCR1-AS1Q8TAF5 88 aa17.03■□□□□ 0.32
PCDH8-202ENST00000377942 POM121Q96HA1 1249 aa17.03■□□□□ 0.32
PCDH8-202ENST00000377942 OR1A1Q9P1Q5 309 aa17.03■□□□□ 0.32
PCDH8-202ENST00000377942 DNAJC13O75165 2243 aa17.03■□□□□ 0.32
PCDH8-202ENST00000377942 SCN5AQ14524 2016 aa17.03■□□□□ 0.32
PCDH8-202ENST00000377942 TAGLNQ01995 201 aaKnown RBP17.03■□□□□ 0.32
PCDH8-202ENST00000377942 OR10G4Q8NGN3 311 aa17.03■□□□□ 0.32
PCDH8-202ENST00000377942 OR10G9Q8NGN4 311 aa17.03■□□□□ 0.32
PCDH8-202ENST00000377942 OR10G7Q8NGN6 311 aa17.03■□□□□ 0.32
PCDH8-202ENST00000377942 ATP5SQ99766 215 aa17.03■□□□□ 0.32
PCDH8-202ENST00000377942 SF3B6Q9Y3B4 125 aaKnown RBP17.03■□□□□ 0.32
PCDH8-202ENST00000377942 V9GYS6 101 aa17.03■□□□□ 0.32
PCDH8-202ENST00000377942 K7N7A8 449 aa17.03■□□□□ 0.32
PCDH8-202ENST00000377942 OPN1MWP04001 364 aa17.03■□□□□ 0.32
PCDH8-202ENST00000377942 OPN1MW2P0DN77 364 aa17.03■□□□□ 0.32
PCDH8-202ENST00000377942 OPN1MW3P0DN78 364 aa17.03■□□□□ 0.32
PCDH8-202ENST00000377942 MPV17P39210 176 aa17.03■□□□□ 0.32
PCDH8-202ENST00000377942 AKIRIN1Q9H9L7 192 aaPredicted RBP17.03■□□□□ 0.32
PCDH8-202ENST00000377942 WSB1Q9Y6I7 421 aa17.03■□□□□ 0.32
PCDH8-202ENST00000377942 ARID1AO14497 2285 aa17.03■□□□□ 0.32
PCDH8-202ENST00000377942 CLDN14O95500 239 aa17.02■□□□□ 0.32
PCDH8-202ENST00000377942 AANATQ16613 207 aa17.02■□□□□ 0.32
PCDH8-202ENST00000377942 MRPL24Q96A35 216 aaKnown RBP17.02■□□□□ 0.32
PCDH8-202ENST00000377942 CACNA1EQ15878 2313 aa17.02■□□□□ 0.32
PCDH8-202ENST00000377942 HNF1AP20823 631 aa17.02■□□□□ 0.32
PCDH8-202ENST00000377942 PRR27Q6MZM9 219 aa17.02■□□□□ 0.32
PCDH8-202ENST00000377942 DPF1Q92782 380 aa17.02■□□□□ 0.32
PCDH8-202ENST00000377942 SAT2Q96F10 170 aaPredicted RBP17.02■□□□□ 0.32
PCDH8-202ENST00000377942 KLK13Q9UKR3 277 aa17.02■□□□□ 0.32
PCDH8-202ENST00000377942 TRAV39A0A0B4J263 110 aa17.02■□□□□ 0.31
PCDH8-202ENST00000377942 H3F3AP84243 136 aa17.02■□□□□ 0.31
PCDH8-202ENST00000377942 CCL13Q99616 98 aa17.02■□□□□ 0.31
PCDH8-202ENST00000377942 CCDC88CQ9P219 2028 aa17.02■□□□□ 0.31
PCDH8-202ENST00000377942 RFPL3SP0C7P2 107 aa17.02■□□□□ 0.31
PCDH8-202ENST00000377942 HLA-GP17693 338 aa17.02■□□□□ 0.31
PCDH8-202ENST00000377942 SPINK9Q5DT21 86 aa17.02■□□□□ 0.31
PCDH8-202ENST00000377942 FADS6Q8N9I5 356 aa17.02■□□□□ 0.31
PCDH8-202ENST00000377942 HSF4Q9ULV5 492 aa17.02■□□□□ 0.31
PCDH8-202ENST00000377942 DBX1A6NMT0 343 aa17.01■□□□□ 0.31
PCDH8-202ENST00000377942 NRN1LQ496H8 165 aa17.01■□□□□ 0.31
PCDH8-202ENST00000377942 WDR61Q9GZS3 305 aaKnown RBP17.01■□□□□ 0.31
PCDH8-202ENST00000377942 G6PC2Q9NQR9 355 aa17.01■□□□□ 0.31
PCDH8-202ENST00000377942 OPN4Q9UHM6 478 aa17.01■□□□□ 0.31
PCDH8-202ENST00000377942 TBX6O95947 436 aaPredicted RBP17.01■□□□□ 0.31
PCDH8-202ENST00000377942 TNFSF10P50591 281 aa17.01■□□□□ 0.31
PCDH8-202ENST00000377942 SSTP61278 116 aa17.01■□□□□ 0.31
PCDH8-202ENST00000377942 SLC25A53Q5H9E4 307 aa17.01■□□□□ 0.31
PCDH8-202ENST00000377942 TEX29Q8N6K0 151 aa17.01■□□□□ 0.31
PCDH8-202ENST00000377942 KLF14Q8TD94 323 aaPredicted RBP17.01■□□□□ 0.31
PCDH8-202ENST00000377942 MRGPRFQ96AM1 343 aa17.01■□□□□ 0.31
PCDH8-202ENST00000377942 POMT1Q9Y6A1 747 aa17.01■□□□□ 0.31
PCDH8-202ENST00000377942 PPP1CCP36873 323 aaKnown RBP17.01■□□□□ 0.31
PCDH8-202ENST00000377942 ZNF260Q3ZCT1 412 aa17.01■□□□□ 0.31
PCDH8-202ENST00000377942 HDHD3Q9BSH5 251 aaPredicted RBP17.01■□□□□ 0.31
PCDH8-202ENST00000377942 ABHD14AQ9BUJ0 271 aa17.01■□□□□ 0.31
PCDH8-202ENST00000377942 KCNK7Q9Y2U2 307 aa17.01■□□□□ 0.31
PCDH8-202ENST00000377942 DOCK6Q96HP0 2047 aa17.01■□□□□ 0.31
PCDH8-202ENST00000377942 OR2H2O95918 312 aa17.01■□□□□ 0.31
PCDH8-202ENST00000377942 DYRK2Q92630 601 aa17.01■□□□□ 0.31
PCDH8-202ENST00000377942 TMEM167BQ9NRX6 74 aa17.01■□□□□ 0.31
PCDH8-202ENST00000377942 CACNA1IQ9P0X4 2223 aa17.01■□□□□ 0.31
PCDH8-202ENST00000377942 ATP6V1G2-DDX39BF2Z307 99 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 UMODP07911 640 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 DYNLT3P51808 116 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 ZNF429Q86V71 674 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 G3V3Q6 166 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 HPRT1P00492 218 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 HLA-DQB1P01920 261 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 SLC25A5P05141 298 aaKnown RBP17■□□□□ 0.31
PCDH8-202ENST00000377942 SNAI3Q3KNW1 292 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 ZNF66Q6ZN08 573 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 COA4Q9NYJ1 87 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 RLFQ13129 1914 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 NTN3O00634 580 aaPredicted RBP17■□□□□ 0.31
PCDH8-202ENST00000377942 SULT1A1P50225 295 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 TIMM23BQ5SRD1 257 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 ADAM10O14672 748 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 ATXN7O15265 892 aaPredicted RBP17■□□□□ 0.31
PCDH8-202ENST00000377942 GNG7O60262 68 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 GYPAP02724 150 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 MC5RP33032 325 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 ERVFC1-1P60608 527 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 NECAP1Q8NC96 275 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 SCMH1Q96GD3 660 aa17■□□□□ 0.31
PCDH8-202ENST00000377942 TECRQ9NZ01 308 aaKnown RBP17■□□□□ 0.31
PCDH8-202ENST00000377942 S100A4P26447 101 aaKnown RBP16.99■□□□□ 0.31
PCDH8-202ENST00000377942 ST6GAL2Q96JF0 529 aa16.99■□□□□ 0.31
PCDH8-202ENST00000377942 MMP24Q9Y5R2 645 aa16.99■□□□□ 0.31
PCDH8-202ENST00000377942 SYNGR3O43761 229 aa16.99■□□□□ 0.31
PCDH8-202ENST00000377942 ZIC3O60481 467 aa16.99■□□□□ 0.31
PCDH8-202ENST00000377942 C1orf162Q8NEQ5 155 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms