RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 MED13Q9UHV7 2174 aa12.37□□□□□ -0.43
TNFRSF1B-201ENST00000376259 MAP1LC3B2A6NCE7 125 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 RHBDL1O75783 438 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 CRYAAP02489 173 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 COX6A1P12074 109 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 RPS2P15880 293 aaKnown RBP12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 OR3A1P47881 315 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 C6orf15Q6UXA7 325 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 BOD1Q96IK1 185 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 MAP1LC3BQ9GZQ8 125 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 TMEM100Q9NV29 134 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 TRBV6-7A0A0A0MS04 114 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 SCGB1D1O95968 90 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 OPN1MWP04001 364 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 UMODP07911 640 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 SNRPCP09234 159 aaKnown RBP12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 MMP7P09237 267 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 OPN1MW2P0DN77 364 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 OPN1MW3P0DN78 364 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 NTF4P34130 210 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 HLA-DRB3P79483 266 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 ZNF66Q6ZN08 573 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 ZNF826PQ6ZT77 177 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 MEGF10Q96KG7 1140 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 ZFHX2Q9C0A1 2572 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 CYTIPO60759 359 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 RPS23P62266 143 aaKnown RBP12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 MRPL49Q13405 166 aaKnown RBP12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 RSPO1Q2MKA7 263 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 CLN8Q9UBY8 286 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 TINAGQ9UJW2 476 aa12.36□□□□□ -0.43
TNFRSF1B-201ENST00000376259 OR1C1Q15619 314 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 MRGPRDQ8TDS7 321 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 HEYLQ9NQ87 328 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 SLC22A20A6NK97 555 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 PPP5D1E7EU14 171 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 CST2P09228 141 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 PGA5P0DJD9 388 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 G6PCP35575 357 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 NCR3LG1Q68D85 454 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 C17orf82Q86X59 251 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 SAP25Q8TEE9 199 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 APOBEC3DQ96AK3 386 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 GPR146Q96CH1 333 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 PATZ1Q9HBE1 687 aaKnown RBP12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 RPRMQ9NS64 109 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 TREM2Q9NZC2 230 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 V9GYS6 101 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 COL6A6A6NMZ7 2263 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 TSTD3H0UI37 97 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 SYNGR2O43760 224 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 SYNGR3O43761 229 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 CD5P06127 495 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 HEXAP06865 529 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 PLA2G5P39877 138 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 DHRS13Q6UX07 377 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 SNIP1Q8TAD8 396 aaKnown RBP12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 NABP1Q96AH0 204 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 ANGPTL4Q9BY76 406 aa12.35□□□□□ -0.43
TNFRSF1B-201ENST00000376259 CXorf65A6NEN9 183 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 TIMM8AO60220 97 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 IL11RAQ14626 422 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 SELENOHQ8IZQ5 122 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 CT55Q8WUE5 264 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 GLRX2Q9NS18 164 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 SH3BGRL2Q9UJC5 107 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 NPIPB13A6NJU9 1138 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 NPIPB4C9JG80 1138 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 RPL36A-HNRNPH2H7BZ11 118 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 DVL1O14640 695 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 SMIM6P0DI80 62 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 PDLIM3Q53GG5 364 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 ATP1A1-AS1Q5TC04 95 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 ZNF573Q86YE8 665 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 TMEM171Q8WVE6 324 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 MSI2Q96DH6 328 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 OR2D2Q9H210 308 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 MSL2Q9HCI7 577 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 COA4Q9NYJ1 87 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 PRSS50Q9UI38 385 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 PSMB3P49720 205 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 CCL11P51671 97 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 GNG3P63215 75 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 TM2D1Q9BX74 207 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 ARV1Q9H2C2 271 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 ARRDC1-AS1Q9H2J1 176 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 MTCH1Q9NZJ7 389 aa12.34□□□□□ -0.43
TNFRSF1B-201ENST00000376259 ZNF737O75373 536 aa12.33□□□□□ -0.44
TNFRSF1B-201ENST00000376259 FGF7P21781 194 aa12.33□□□□□ -0.44
TNFRSF1B-201ENST00000376259 SLC38A11Q08AI6 406 aa12.33□□□□□ -0.44
TNFRSF1B-201ENST00000376259 TMEM211Q6ICI0 200 aa12.33□□□□□ -0.44
TNFRSF1B-201ENST00000376259 KCNE4Q8WWG9 221 aa12.33□□□□□ -0.44
TNFRSF1B-201ENST00000376259 OR2J1Q9GZK6 312 aa12.33□□□□□ -0.44
TNFRSF1B-201ENST00000376259 VSIRQ9H7M9 311 aa12.33□□□□□ -0.44
TNFRSF1B-201ENST00000376259 DEPPQ9NTK1 212 aa12.33□□□□□ -0.44
TNFRSF1B-201ENST00000376259 PINLYPA6NC86 204 aa12.33□□□□□ -0.44
TNFRSF1B-201ENST00000376259 PGLYRP1O75594 196 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF1B-201ENST00000376259 CDS2O95674 445 aa12.33□□□□□ -0.44
TNFRSF1B-201ENST00000376259 F2RP25116 425 aa12.33□□□□□ -0.44
TNFRSF1B-201ENST00000376259 RTP5Q14D33 572 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms