RNA–Protein interactions for RNA: ENST00000375498.6

HTR3A-203, Transcript of 5-hydroxytryptamine receptor 3A, humanhuman

TSL 1 (best) BASIC

Gene HTR3A, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3A-203ENST00000375498 PROB1E7EW31 1015 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 WNT9BO14905 357 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 CD5P06127 495 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 DANCRP0C864 163 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 PSG2P11465 335 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 CBR1P16152 277 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 CD80P33681 288 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 NPBWR1P48145 328 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 CLINT1Q14677 625 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 ZNF146Q15072 292 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 IZUMO4Q1ZYL8 232 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 SWI5Q1ZZU3 235 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 Q8IYB0 196 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 CLEC18CQ8NCF0 446 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 OR10V1Q8NGI7 309 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 SPIN2AQ99865 258 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 SPIN2BQ9BPZ2 258 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 SEC11CQ9BY50 192 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 TAAR3PQ9P1P4 343 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 OR14J1Q9UGF5 321 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 TRAPPC2LQ9UL33 140 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 RIF1Q5UIP0 2472 aaKnown RBP13.11□□□□□ -0.31
HTR3A-203ENST00000375498 TFF1P04155 84 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 ACSF3Q4G176 576 aaPredicted RBP13.11□□□□□ -0.31
HTR3A-203ENST00000375498 C11orf53Q8IXP5 236 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 TMEM171Q8WVE6 324 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 OBP2BQ9NPH6 170 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 DKK4Q9UBT3 224 aa13.11□□□□□ -0.31
HTR3A-203ENST00000375498 DUXBA0A1W2PPF3 345 aa13.1□□□□□ -0.31
HTR3A-203ENST00000375498 PRR33A8MZF0 331 aa13.1□□□□□ -0.31
HTR3A-203ENST00000375498 FAM157AC9JC47 383 aa13.1□□□□□ -0.31
HTR3A-203ENST00000375498 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.1□□□□□ -0.31
HTR3A-203ENST00000375498 WDR1O75083 606 aa13.1□□□□□ -0.31
HTR3A-203ENST00000375498 SFTA3P0C7M3 94 aa13.1□□□□□ -0.31
HTR3A-203ENST00000375498 EPHA1P21709 976 aa13.1□□□□□ -0.31
HTR3A-203ENST00000375498 MDH2P40926 338 aaKnown RBP13.1□□□□□ -0.31
HTR3A-203ENST00000375498 ID3Q02535 119 aa13.1□□□□□ -0.31
HTR3A-203ENST00000375498 MIDNQ504T8 468 aa13.1□□□□□ -0.31
HTR3A-203ENST00000375498 CBLN2Q8IUK8 224 aa13.1□□□□□ -0.31
HTR3A-203ENST00000375498 TMEM252Q8N6L7 170 aa13.1□□□□□ -0.31
HTR3A-203ENST00000375498 SARAFQ96BY9 339 aa13.1□□□□□ -0.31
HTR3A-203ENST00000375498 OPN3Q9H1Y3 402 aaPredicted RBP13.1□□□□□ -0.31
HTR3A-203ENST00000375498 LYRM2Q9NU23 88 aaPredicted RBP13.1□□□□□ -0.31
HTR3A-203ENST00000375498 TREM2Q9NZC2 230 aa13.1□□□□□ -0.31
HTR3A-203ENST00000375498 NPIPB11E5RHQ5 1161 aa13.09□□□□□ -0.31
HTR3A-203ENST00000375498 PSPNO60542 156 aa13.09□□□□□ -0.31
HTR3A-203ENST00000375498 IGKV1-39P01597 117 aa13.09□□□□□ -0.31
HTR3A-203ENST00000375498 IGKV1D-39P04432 117 aa13.09□□□□□ -0.31
HTR3A-203ENST00000375498 CECR9P0C854 216 aa13.09□□□□□ -0.31
HTR3A-203ENST00000375498 ZNF616Q08AN1 781 aa13.09□□□□□ -0.31
HTR3A-203ENST00000375498 ZNF610Q8N9Z0 462 aa13.09□□□□□ -0.31
HTR3A-203ENST00000375498 GPR146Q96CH1 333 aa13.09□□□□□ -0.31
HTR3A-203ENST00000375498 CACFD1Q9UGQ2 172 aa13.09□□□□□ -0.31
HTR3A-203ENST00000375498 PURGQ9UJV8 347 aaKnown RBP13.09□□□□□ -0.31
HTR3A-203ENST00000375498 PPP1R3CQ9UQK1 317 aa13.09□□□□□ -0.31
HTR3A-203ENST00000375498 SH2D1BO14796 132 aa13.09□□□□□ -0.31
HTR3A-203ENST00000375498 CHST1O43916 411 aa13.09□□□□□ -0.31
HTR3A-203ENST00000375498 CNOT4O95628 575 aaKnown RBP13.09□□□□□ -0.31
HTR3A-203ENST00000375498 HAND1O96004 215 aa13.09□□□□□ -0.31
HTR3A-203ENST00000375498 HOXC12P31275 282 aa13.09□□□□□ -0.31
HTR3A-203ENST00000375498 FAM53AQ6NSI3 398 aaPredicted RBP13.09□□□□□ -0.31
HTR3A-203ENST00000375498 Q6ZR03 302 aa13.09□□□□□ -0.31
HTR3A-203ENST00000375498 SPAG16Q8N0X2 631 aa13.09□□□□□ -0.31
HTR3A-203ENST00000375498 OR8G5Q8NG78 346 aa13.09□□□□□ -0.31
HTR3A-203ENST00000375498 IL22RA2Q969J5 263 aa13.09□□□□□ -0.31
HTR3A-203ENST00000375498 HES4Q9HCC6 221 aa13.09□□□□□ -0.31
HTR3A-203ENST00000375498 MBNL3Q9NUK0 354 aaKnown RBP13.09□□□□□ -0.31
HTR3A-203ENST00000375498 TNFSF13O75888 250 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 CST7O76096 145 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 PVALBP20472 110 aaPredicted RBP13.08□□□□□ -0.32
HTR3A-203ENST00000375498 PAX9P55771 341 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 PRAMEF6Q5VXH4 476 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 SHEQ5VZ18 495 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 TMEM182Q6ZP80 229 aaPredicted RBP13.08□□□□□ -0.32
HTR3A-203ENST00000375498 Q6ZRM9 215 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 MOB1BQ7L9L4 216 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 CLRN3Q8NCR9 226 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 SCRT1Q9BWW7 348 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 PLEKHF2Q9H8W4 249 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 RNF115Q9Y4L5 304 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 CADP27708 2225 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 TMEM210A6NLX4 147 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 TOR1AO14656 332 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 HSPA12AO43301 675 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 TSPAN15O95858 294 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 CAMLGP49069 296 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 FABP6P51161 128 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 VAMP2P63027 116 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 HMGN3Q15651 99 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 SEM1Q6ZVN7 128 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 ZNF295-AS1Q8N0V1 137 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 ESRP2Q9H6T0 727 aaKnown RBP13.08□□□□□ -0.32
HTR3A-203ENST00000375498 MSL2Q9HCI7 577 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 PLSCR4Q9NRQ2 329 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 WIPI2Q9Y4P8 454 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 USF3Q68DE3 2245 aa13.08□□□□□ -0.32
HTR3A-203ENST00000375498 ZFHX2Q9C0A1 2572 aaPredicted RBP13.07□□□□□ -0.32
HTR3A-203ENST00000375498 PITX3O75364 302 aa13.07□□□□□ -0.32
HTR3A-203ENST00000375498 HEXAP06865 529 aa13.07□□□□□ -0.32
HTR3A-203ENST00000375498 SERPINE2P07093 398 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms