RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 PCNX3Q9H6A9 2034 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 A0A1B0GU03 582 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 SHISA7A6NL88 538 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 UBE2CO00762 179 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 FOLR2P14207 255 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 FGF7P21781 194 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 SPEM2Q0P670 501 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 GGACTQ9BVM4 153 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 OR51I2Q9H344 312 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 DUXBA0A1W2PPF3 345 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 CACNA1DQ01668 2161 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 EDDM3AQ14507 147 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 HIST3H3Q16695 136 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 HIKESHIQ53FT3 197 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 GPR146Q96CH1 333 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 CHD7Q9P2D1 2997 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 ATP23Q9Y6H3 246 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 UNC80Q8N2C7 3258 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 PATE3B3GLJ2 98 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 RFPL3SP0C7P2 107 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 FGF5P12034 268 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 COX5AP20674 150 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 OR8G1Q15617 311 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 TMEM41BQ5BJD5 291 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 OR5A2Q8NGI9 324 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 HEYLQ9NQ87 328 aaPredicted RBP11.31□□□□□ -0.6
CUL4A-203ENST00000375441 TCFL5Q9UL49 500 aa11.31□□□□□ -0.6
CUL4A-203ENST00000375441 MYO7BQ6PIF6 2116 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 MUC22E2RYF6 1773 aaPredicted RBP11.3□□□□□ -0.6
CUL4A-203ENST00000375441 B4DEV8 164 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 H0Y980 276 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 K7N7A8 449 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 SRP19P09132 144 aaKnown RBP11.3□□□□□ -0.6
CUL4A-203ENST00000375441 BCL2P10415 239 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 ANOS1P23352 680 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 CDX1P47902 265 aaPredicted RBP11.3□□□□□ -0.6
CUL4A-203ENST00000375441 ERVS71-1P61550 626 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 ZXDAP98168 799 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 SSX2Q16385 188 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 ZIC4Q8N9L1 334 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 FAM173AQ9BQD7 235 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 VAX2Q9UIW0 290 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 OPN1MWP04001 364 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 OPN1MW2P0DN77 364 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 OPN1MW3P0DN78 364 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 MMP9P14780 707 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 TRA2AQ13595 282 aaKnown RBP eCLIP11.3□□□□□ -0.6
CUL4A-203ENST00000375441 C3AR1Q16581 482 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 CEACAM21Q3KPI0 293 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 C5orf24Q7Z6I8 188 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 H1FOOQ8IZA3 346 aaPredicted RBP11.3□□□□□ -0.6
CUL4A-203ENST00000375441 SAP25Q8TEE9 199 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 GCH1P30793 250 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 UBE2G2P60604 165 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 MRPL14Q6P1L8 145 aaKnown RBP11.3□□□□□ -0.6
CUL4A-203ENST00000375441 CXorf67Q86X51 503 aaPredicted RBP11.3□□□□□ -0.6
CUL4A-203ENST00000375441 DNAJC13O75165 2243 aa11.3□□□□□ -0.6
CUL4A-203ENST00000375441 DENND4AQ7Z401 1863 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 PRUNE2Q8WUY3 3088 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 OR5B21A6NL26 309 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 CYTIPO60759 359 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 NGFP01138 241 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 CD46P15529 392 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 AGAP20933 346 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 MDH2P40926 338 aaKnown RBP11.29□□□□□ -0.6
CUL4A-203ENST00000375441 RIPPLY2Q5TAB7 128 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 SLC35E3Q7Z769 313 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 KDF1Q8NAX2 398 aaPredicted RBP11.29□□□□□ -0.6
CUL4A-203ENST00000375441 PLPPR2Q96GM1 343 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 LIME1Q9H400 295 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 IL36RNQ9UBH0 155 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 OR5H1A6NKK0 313 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 BMP5P22003 454 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 BSXQ3C1V8 233 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 SPINK9Q5DT21 86 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 FFAR4Q5NUL3 377 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 LRTM2Q8N967 370 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 GALMQ96C23 342 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 PACRGQ96M98 296 aaPredicted RBP11.29□□□□□ -0.6
CUL4A-203ENST00000375441 TAAR3PQ9P1P4 343 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 PRSS50Q9UI38 385 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 MPC1Q9Y5U8 109 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 ELOA3CA0A087WX78 387 aaPredicted RBP11.29□□□□□ -0.6
CUL4A-203ENST00000375441 A0A0G2JMM0 328 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 A0A1W2PPB8 328 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 A0A1W2PRS3 328 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 KIR3DP1A8MWS1 328 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 TIMM8AO60220 97 aaPredicted RBP11.29□□□□□ -0.6
CUL4A-203ENST00000375441 HOXB1P14653 301 aaPredicted RBP11.29□□□□□ -0.6
CUL4A-203ENST00000375441 CRYGSP22914 178 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 GALR1P47211 349 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 IL15RAQ13261 267 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 OR1C1Q15619 314 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 MRGPRGQ86SM5 289 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 OR5D13Q8NGL4 314 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 FGFBP3Q8TAT2 258 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 ABHD14BQ96IU4 210 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 LURAP1Q96LR2 239 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 RPRMQ9NS64 109 aa11.29□□□□□ -0.6
CUL4A-203ENST00000375441 SHANK1Q9Y566 2161 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms