RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ERGIC1Q969X5 290 aa10.24□□□□□ -0.77
HMGCL-202ENST00000374487 LRRC46Q96FV0 321 aa10.24□□□□□ -0.77
HMGCL-202ENST00000374487 MMP26Q9NRE1 261 aa10.24□□□□□ -0.77
HMGCL-202ENST00000374487 TRAPPC2LQ9UL33 140 aa10.24□□□□□ -0.77
HMGCL-202ENST00000374487 OR2W1Q9Y3N9 320 aa10.24□□□□□ -0.77
HMGCL-202ENST00000374487 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.24□□□□□ -0.77
HMGCL-202ENST00000374487 AHRRA9YTQ3 701 aa10.24□□□□□ -0.77
HMGCL-202ENST00000374487 SH2D1BO14796 132 aa10.24□□□□□ -0.77
HMGCL-202ENST00000374487 SIGLEC5O15389 551 aa10.24□□□□□ -0.77
HMGCL-202ENST00000374487 OR2H2O95918 312 aa10.24□□□□□ -0.77
HMGCL-202ENST00000374487 FOXF2Q12947 444 aa10.24□□□□□ -0.77
HMGCL-202ENST00000374487 ACSF3Q4G176 576 aaPredicted RBP10.24□□□□□ -0.77
HMGCL-202ENST00000374487 PXDC1Q5TGL8 231 aa10.24□□□□□ -0.77
HMGCL-202ENST00000374487 GFRALQ6UXV0 394 aa10.24□□□□□ -0.77
HMGCL-202ENST00000374487 SELENOHQ8IZQ5 122 aaKnown RBP10.24□□□□□ -0.77
HMGCL-202ENST00000374487 C1orf162Q8NEQ5 155 aaPredicted RBP10.24□□□□□ -0.77
HMGCL-202ENST00000374487 OR4D5Q8NGN0 318 aa10.24□□□□□ -0.77
HMGCL-202ENST00000374487 USB1Q9BQ65 265 aaKnown RBP10.24□□□□□ -0.77
HMGCL-202ENST00000374487 TREM2Q9NZC2 230 aa10.24□□□□□ -0.77
HMGCL-202ENST00000374487 ERRFI1Q9UJM3 462 aaPredicted RBP10.24□□□□□ -0.77
HMGCL-202ENST00000374487 RCL1Q9Y2P8 373 aaKnown RBP10.24□□□□□ -0.77
HMGCL-202ENST00000374487 POMT1Q9Y6A1 747 aa10.24□□□□□ -0.77
HMGCL-202ENST00000374487 TMEM210A6NLX4 147 aa10.23□□□□□ -0.77
HMGCL-202ENST00000374487 H0YL77 283 aa10.23□□□□□ -0.77
HMGCL-202ENST00000374487 HSPA12AO43301 675 aa10.23□□□□□ -0.77
HMGCL-202ENST00000374487 WDR1O75083 606 aa10.23□□□□□ -0.77
HMGCL-202ENST00000374487 IGKV3-15P01624 115 aa10.23□□□□□ -0.77
HMGCL-202ENST00000374487 PVALBP20472 110 aaPredicted RBP10.23□□□□□ -0.77
HMGCL-202ENST00000374487 COX5AP20674 150 aa10.23□□□□□ -0.77
HMGCL-202ENST00000374487 MPV17P39210 176 aa10.23□□□□□ -0.77
HMGCL-202ENST00000374487 NKX2-1P43699 371 aaPredicted RBP10.23□□□□□ -0.77
HMGCL-202ENST00000374487 ERVK11-1P61568 191 aa10.23□□□□□ -0.77
HMGCL-202ENST00000374487 SWI5Q1ZZU3 235 aa10.23□□□□□ -0.77
HMGCL-202ENST00000374487 ZNF880Q6PDB4 577 aa10.23□□□□□ -0.77
HMGCL-202ENST00000374487 FIP1L1Q6UN15 594 aaKnown RBP10.23□□□□□ -0.77
HMGCL-202ENST00000374487 UBAC2Q8NBM4 344 aa10.23□□□□□ -0.77
HMGCL-202ENST00000374487 SMIM8Q96KF7 97 aa10.23□□□□□ -0.77
HMGCL-202ENST00000374487 NRIP2Q9BQI9 281 aa10.23□□□□□ -0.77
HMGCL-202ENST00000374487 TINAGQ9UJW2 476 aa10.23□□□□□ -0.77
HMGCL-202ENST00000374487 TRAV39A0A0B4J263 110 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 TMEM218A2RU14 115 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 SLC33A1O00400 549 aaPredicted RBP10.22□□□□□ -0.77
HMGCL-202ENST00000374487 ADAM20O43506 726 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 PGLYRP1O75594 196 aaPredicted RBP10.22□□□□□ -0.77
HMGCL-202ENST00000374487 PGA5P0DJD9 388 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 SULT1A2P50226 295 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 BLOC1S1P78537 153 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 IL34Q6ZMJ4 242 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 MOB1BQ7L9L4 216 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 H1FOOQ8IZA3 346 aaPredicted RBP10.22□□□□□ -0.77
HMGCL-202ENST00000374487 WDR31Q8NA23 367 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 ST6GALNAC3Q8NDV1 305 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 TREM1Q9NP99 234 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 PLSCR4Q9NRQ2 329 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 PROCRQ9UNN8 238 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 RBM7Q9Y580 266 aaKnown RBP10.22□□□□□ -0.77
HMGCL-202ENST00000374487 BAHCC1Q9P281 2608 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 UTP20O75691 2785 aaKnown RBP10.22□□□□□ -0.77
HMGCL-202ENST00000374487 H0Y980 276 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 ABCD4O14678 606 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 TIMM8AO60220 97 aaPredicted RBP10.22□□□□□ -0.77
HMGCL-202ENST00000374487 CRYABP02511 175 aaKnown RBP10.22□□□□□ -0.77
HMGCL-202ENST00000374487 VDAC1P21796 283 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 UCP1P25874 307 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 CAV2P51636 162 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 TAGLNQ01995 201 aaKnown RBP10.22□□□□□ -0.77
HMGCL-202ENST00000374487 NHLH2Q02577 135 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 PJVKQ0ZLH3 352 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 ZNF146Q15072 292 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 ZNF497Q6ZNH5 498 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 CXorf67Q86X51 503 aaPredicted RBP10.22□□□□□ -0.77
HMGCL-202ENST00000374487 ZNF610Q8N9Z0 462 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 OR8G5Q8NG78 346 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 TSNAXQ99598 290 aaKnown RBP10.22□□□□□ -0.77
HMGCL-202ENST00000374487 CABLES2Q9BTV7 478 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 FAM212BQ9NTI7 297 aaPredicted RBP10.22□□□□□ -0.77
HMGCL-202ENST00000374487 TAAR3PQ9P1P4 343 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 OR14J1Q9UGF5 321 aa10.22□□□□□ -0.77
HMGCL-202ENST00000374487 MYO18BQ8IUG5 2567 aa10.21□□□□□ -0.77
HMGCL-202ENST00000374487 RP1L1Q8IWN7 2480 aaPredicted RBP10.21□□□□□ -0.77
HMGCL-202ENST00000374487 DUXBA0A1W2PPF3 345 aa10.21□□□□□ -0.77
HMGCL-202ENST00000374487 NUPL2O15504 423 aaKnown RBP10.21□□□□□ -0.77
HMGCL-202ENST00000374487 SERPINE2P07093 398 aa10.21□□□□□ -0.77
HMGCL-202ENST00000374487 F2RP25116 425 aa10.21□□□□□ -0.77
HMGCL-202ENST00000374487 LPAR6P43657 344 aa10.21□□□□□ -0.77
HMGCL-202ENST00000374487 FABP6P51161 128 aa10.21□□□□□ -0.77
HMGCL-202ENST00000374487 VAMP2P63027 116 aa10.21□□□□□ -0.77
HMGCL-202ENST00000374487 MST1LQ2TV78 715 aa10.21□□□□□ -0.77
HMGCL-202ENST00000374487 ATRAIDQ6UW56 229 aa10.21□□□□□ -0.77
HMGCL-202ENST00000374487 DMBX1Q8NFW5 382 aa10.21□□□□□ -0.77
HMGCL-202ENST00000374487 OR10V1Q8NGI7 309 aa10.21□□□□□ -0.77
HMGCL-202ENST00000374487 OR5D13Q8NGL4 314 aa10.21□□□□□ -0.77
HMGCL-202ENST00000374487 OR51H1Q8NH63 302 aa10.21□□□□□ -0.77
HMGCL-202ENST00000374487 PLPPR1Q8TBJ4 325 aa10.21□□□□□ -0.77
HMGCL-202ENST00000374487 BSCL2Q96G97 398 aaPredicted RBP10.21□□□□□ -0.77
HMGCL-202ENST00000374487 OPN3Q9H1Y3 402 aaPredicted RBP10.21□□□□□ -0.77
HMGCL-202ENST00000374487 OR1A1Q9P1Q5 309 aa10.21□□□□□ -0.77
HMGCL-202ENST00000374487 PURGQ9UJV8 347 aaKnown RBP10.21□□□□□ -0.77
HMGCL-202ENST00000374487 PIGBOS1A0A0B4J2F0 54 aa10.21□□□□□ -0.78
HMGCL-202ENST00000374487 A6NLC8 198 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 308.4 ms