RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.94□□□□□ -0.98
CD28-202ENST00000374481 PNKDQ8N490 385 aa8.94□□□□□ -0.98
CD28-202ENST00000374481 SPSB1Q96BD6 273 aa8.94□□□□□ -0.98
CD28-202ENST00000374481 NRTNQ99748 197 aa8.94□□□□□ -0.98
CD28-202ENST00000374481 GTSF1LQ9H1H1 148 aa8.94□□□□□ -0.98
CD28-202ENST00000374481 HCSTQ9UBK5 93 aa8.94□□□□□ -0.98
CD28-202ENST00000374481 ERRFI1Q9UJM3 462 aaPredicted RBP8.94□□□□□ -0.98
CD28-202ENST00000374481 GBF1Q92538 1859 aa8.94□□□□□ -0.98
CD28-202ENST00000374481 PDCD6O75340 191 aa8.94□□□□□ -0.98
CD28-202ENST00000374481 EGR1P18146 543 aa8.94□□□□□ -0.98
CD28-202ENST00000374481 NPBWR2P48146 333 aa8.94□□□□□ -0.98
CD28-202ENST00000374481 MFAP2P55001 183 aa8.94□□□□□ -0.98
CD28-202ENST00000374481 TMEM215Q68D42 235 aa8.94□□□□□ -0.98
CD28-202ENST00000374481 KIAA0895LQ68EN5 471 aa8.94□□□□□ -0.98
CD28-202ENST00000374481 ACSM6Q6P461 480 aa8.94□□□□□ -0.98
CD28-202ENST00000374481 RSPO2Q6UXX9 243 aaPredicted RBP8.94□□□□□ -0.98
CD28-202ENST00000374481 ZNF775Q96BV0 537 aaPredicted RBP8.94□□□□□ -0.98
CD28-202ENST00000374481 SFRP2Q96HF1 295 aa8.94□□□□□ -0.98
CD28-202ENST00000374481 TMEM204Q9BSN7 226 aa8.94□□□□□ -0.98
CD28-202ENST00000374481 SPCS1Q9Y6A9 102 aa8.94□□□□□ -0.98
CD28-202ENST00000374481 SEC16AO15027 2179 aa8.94□□□□□ -0.98
CD28-202ENST00000374481 ZNF732B4DXR9 585 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 LEPROTL1O95214 131 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 EIF3IQ13347 325 aaKnown RBP8.93□□□□□ -0.98
CD28-202ENST00000374481 TRAT1Q6PIZ9 186 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 TCF23Q7RTU1 214 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 TMEM230Q96A57 120 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 FOXQ1Q9C009 403 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 FNDC4Q9H6D8 234 aaPredicted RBP8.93□□□□□ -0.98
CD28-202ENST00000374481 SSC5DA1L4H1 1573 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 LMX1BO60663 402 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 CYBAP13498 195 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 ELNP15502 786 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 CDAP32320 146 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 ADMP35318 185 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 HHEXQ03014 270 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 TMEM187Q14656 261 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 CBLN3Q6UW01 205 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 FAM19A2Q8N3H0 131 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 LRRC75AQ8NAA5 344 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 LINC01555Q8NAE3 123 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 ABHD14BQ96IU4 210 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 QTRT1Q9BXR0 403 aaKnown RBP8.93□□□□□ -0.98
CD28-202ENST00000374481 DEFB126Q9BYW3 111 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 CDH20Q9HBT6 801 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 WFDC1Q9HC57 220 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 A0A087WV48 116 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 C2orf72A6NCS6 295 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 RER1O15258 196 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 SRSF10O75494 262 aaKnown RBP8.93□□□□□ -0.98
CD28-202ENST00000374481 STAG3L2P0CL84 134 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 MRPS11P82912 194 aaKnown RBP8.93□□□□□ -0.98
CD28-202ENST00000374481 ZNF542PQ5EBM4 170 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 PARM1Q6UWI2 310 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 C1orf174Q8IYL3 243 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 OR1K1Q8NGR3 316 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 HELTA6NFD8 242 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 CSN1S1P47710 185 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 DPTQ07507 201 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 C17orf67Q0P5P2 114 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 CDKN3Q16667 212 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 TMEM97Q5BJF2 176 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 NHLRC2Q8NBF2 726 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 OR8B12Q8NGG6 310 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 OR51G1Q8NGK1 321 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 TAF15Q92804 592 aaKnown RBP eCLIP8.93□□□□□ -0.98
CD28-202ENST00000374481 OR8B2Q96RD0 313 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 OR6C1Q96RD1 312 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 FAM234AQ9H0X4 552 aa8.93□□□□□ -0.98
CD28-202ENST00000374481 C19orf25Q9UFG5 118 aaPredicted RBP8.93□□□□□ -0.98
CD28-202ENST00000374481 TRBV9A0A0B4J1U6 114 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 ZNF891A8MT65 544 aaPredicted RBP8.92□□□□□ -0.98
CD28-202ENST00000374481 H3BUT2 72 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 DHRS3O75911 302 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 CCL5P13501 91 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 RHOBP62745 196 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 ZNF141Q15928 474 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 FAM78AQ5JUQ0 283 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 MMD2Q8IY49 270 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 APOBEC3DQ96AK3 386 aaPredicted RBP8.92□□□□□ -0.98
CD28-202ENST00000374481 TMEM56Q96MV1 263 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 TMEM222Q9H0R3 208 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 CCL28Q9NRJ3 127 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.92□□□□□ -0.98
CD28-202ENST00000374481 JKAMPQ9P055 326 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 SELENOKQ9Y6D0 94 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 TRAV9-2A0A087WT02 112 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 PPIAL4DF5H284 164 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 LINC00869P0C866 280 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 RND2P52198 227 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 TCTAP57738 103 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 PCBD1P61457 104 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 ARF6P62330 175 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 RAC1P63000 192 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 ZNF816Q0VGE8 651 aaPredicted RBP8.92□□□□□ -0.98
CD28-202ENST00000374481 ZNF77Q15935 545 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 LTC4SQ16873 150 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 CA13Q8N1Q1 262 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 TMEM70Q9BUB7 260 aa8.92□□□□□ -0.98
CD28-202ENST00000374481 GLRX2Q9NS18 164 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms