RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 DPRXA6NFQ7 191 aa10.51□□□□□ -0.73
PRPF4-202ENST00000374199 ATP6V1G2-DDX39BF2Z307 99 aa10.51□□□□□ -0.73
PRPF4-202ENST00000374199 PSG2P11465 335 aa10.51□□□□□ -0.73
PRPF4-202ENST00000374199 PHLDA2Q53GA4 152 aa10.51□□□□□ -0.73
PRPF4-202ENST00000374199 TMEM268Q5VZI3 342 aa10.51□□□□□ -0.73
PRPF4-202ENST00000374199 SDSLQ96GA7 329 aa10.51□□□□□ -0.73
PRPF4-202ENST00000374199 CCL28Q9NRJ3 127 aa10.51□□□□□ -0.73
PRPF4-202ENST00000374199 FZR1Q9UM11 496 aa10.51□□□□□ -0.73
PRPF4-202ENST00000374199 RAXQ9Y2V3 346 aa10.51□□□□□ -0.73
PRPF4-202ENST00000374199 POMT1Q9Y6A1 747 aa10.51□□□□□ -0.73
PRPF4-202ENST00000374199 C12orf77C9JDV5 145 aa10.51□□□□□ -0.73
PRPF4-202ENST00000374199 HSPB6O14558 160 aa10.51□□□□□ -0.73
PRPF4-202ENST00000374199 TNFRSF13BO14836 293 aaPredicted RBP10.51□□□□□ -0.73
PRPF4-202ENST00000374199 IGHV1-46P01743 117 aa10.51□□□□□ -0.73
PRPF4-202ENST00000374199 MMP9P14780 707 aa10.51□□□□□ -0.73
PRPF4-202ENST00000374199 STUMQ69YW2 141 aa10.51□□□□□ -0.73
PRPF4-202ENST00000374199 DIRC2Q96SL1 478 aa10.51□□□□□ -0.73
PRPF4-202ENST00000374199 METTL8Q9H825 291 aaKnown RBP10.51□□□□□ -0.73
PRPF4-202ENST00000374199 METRNQ9UJH8 293 aa10.51□□□□□ -0.73
PRPF4-202ENST00000374199 RCL1Q9Y2P8 373 aaKnown RBP10.51□□□□□ -0.73
PRPF4-202ENST00000374199 KANTRA0A1W2PQU2 76 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 A8MXK9 166 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 ITGB1BP1O14713 200 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 IFNA21P01568 189 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 HOXB5P09067 269 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 FAM87AP0C7U9 286 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 BMP5P22003 454 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 CA7P43166 264 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 COL10A1Q03692 680 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 SP6Q3SY56 376 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 INO80EQ8NBZ0 244 aaPredicted RBP10.5□□□□□ -0.73
PRPF4-202ENST00000374199 DCUN1D4Q92564 292 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 LSM10Q969L4 123 aaKnown RBP10.5□□□□□ -0.73
PRPF4-202ENST00000374199 PLEKHA2Q9HB19 425 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 FAM25EA8MYX2 175 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 BET1O15155 118 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 IGKV1-39P01597 117 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 IGKV1D-39P04432 117 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 FAM157CP0CG43 387 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 P2RY1P47900 373 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 CEBPDP49716 269 aaPredicted RBP10.5□□□□□ -0.73
PRPF4-202ENST00000374199 ID3Q02535 119 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 OR2V2Q96R30 315 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 TAF9BQ9HBM6 251 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 GCM1Q9NP62 436 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 GAB2Q9UQC2 676 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 RNF115Q9Y4L5 304 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 F2RL2O00254 374 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 FGF2P09038 288 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 TMEM108Q6UXF1 575 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 ODF3L1Q8IXM7 274 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 OR2Z1Q8NG97 314 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 OR52M1Q8NGK5 317 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 LRRC29Q8WV35 223 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 RBPMSQ93062 196 aaKnown RBP10.5□□□□□ -0.73
PRPF4-202ENST00000374199 SNX22Q96L94 193 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 AGMATQ9BSE5 352 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 PRORYQ9H606 182 aa10.5□□□□□ -0.73
PRPF4-202ENST00000374199 K7N7A8 449 aa10.49□□□□□ -0.73
PRPF4-202ENST00000374199 PHF1O43189 567 aaPredicted RBP10.49□□□□□ -0.73
PRPF4-202ENST00000374199 VDAC1P21796 283 aa10.49□□□□□ -0.73
PRPF4-202ENST00000374199 PRDX2P32119 198 aa10.49□□□□□ -0.73
PRPF4-202ENST00000374199 ATXN7L3Q14CW9 347 aaPredicted RBP10.49□□□□□ -0.73
PRPF4-202ENST00000374199 ADIPOQQ15848 244 aa10.49□□□□□ -0.73
PRPF4-202ENST00000374199 SWI5Q1ZZU3 235 aa10.49□□□□□ -0.73
PRPF4-202ENST00000374199 LRRC37A5PQ49AS3 106 aa10.49□□□□□ -0.73
PRPF4-202ENST00000374199 GPR157Q5UAW9 335 aa10.49□□□□□ -0.73
PRPF4-202ENST00000374199 E5RGE8 158 aa10.49□□□□□ -0.73
PRPF4-202ENST00000374199 FSTL3O95633 263 aa10.49□□□□□ -0.73
PRPF4-202ENST00000374199 HOXA4Q00056 320 aaPredicted RBP10.49□□□□□ -0.73
PRPF4-202ENST00000374199 KLRB1Q12918 225 aa10.49□□□□□ -0.73
PRPF4-202ENST00000374199 AARDQ4LEZ3 155 aa10.49□□□□□ -0.73
PRPF4-202ENST00000374199 ZNF585BQ52M93 769 aa10.49□□□□□ -0.73
PRPF4-202ENST00000374199 HSD17B13Q7Z5P4 300 aaPredicted RBP10.49□□□□□ -0.73
PRPF4-202ENST00000374199 ZNF295-AS1Q8N0V1 137 aa10.49□□□□□ -0.73
PRPF4-202ENST00000374199 ZNF645Q8N7E2 425 aa10.49□□□□□ -0.73
PRPF4-202ENST00000374199 NSG2Q9Y328 171 aa10.49□□□□□ -0.73
PRPF4-202ENST00000374199 SHISA9B4DS77 424 aa10.48□□□□□ -0.73
PRPF4-202ENST00000374199 SHOXO15266 292 aa10.48□□□□□ -0.73
PRPF4-202ENST00000374199 RBPJQ06330 500 aa10.48□□□□□ -0.73
PRPF4-202ENST00000374199 ALKAL2Q6UX46 152 aa10.48□□□□□ -0.73
PRPF4-202ENST00000374199 CMTM1Q8IZ96 169 aa10.48□□□□□ -0.73
PRPF4-202ENST00000374199 OR5T2Q8NGG2 359 aa10.48□□□□□ -0.73
PRPF4-202ENST00000374199 FAM234AQ9H0X4 552 aa10.48□□□□□ -0.73
PRPF4-202ENST00000374199 hCG_1807616A0A1W2PRN6 198 aa10.48□□□□□ -0.73
PRPF4-202ENST00000374199 LOXP28300 417 aaPredicted RBP10.48□□□□□ -0.73
PRPF4-202ENST00000374199 LUMP51884 338 aaPredicted RBP10.48□□□□□ -0.73
PRPF4-202ENST00000374199 BRWD1-AS2P59051 145 aa10.48□□□□□ -0.73
PRPF4-202ENST00000374199 EFNB3Q15768 340 aa10.48□□□□□ -0.73
PRPF4-202ENST00000374199 AANATQ16613 207 aa10.48□□□□□ -0.73
PRPF4-202ENST00000374199 NCMAPQ5T1S8 102 aa10.48□□□□□ -0.73
PRPF4-202ENST00000374199 ZNF561Q8N587 486 aa10.48□□□□□ -0.73
PRPF4-202ENST00000374199 TCTEX1D1Q8N7M0 179 aa10.48□□□□□ -0.73
PRPF4-202ENST00000374199 LYPD6BQ8NI32 183 aa10.48□□□□□ -0.73
PRPF4-202ENST00000374199 SECTM1Q8WVN6 248 aa10.48□□□□□ -0.73
PRPF4-202ENST00000374199 PARP12Q9H0J9 701 aaKnown RBP10.48□□□□□ -0.73
PRPF4-202ENST00000374199 COA4Q9NYJ1 87 aa10.48□□□□□ -0.73
PRPF4-202ENST00000374199 ERRFI1Q9UJM3 462 aaPredicted RBP10.48□□□□□ -0.73
PRPF4-202ENST00000374199 FBXO9Q9UK97 447 aaPredicted RBP10.48□□□□□ -0.73
PRPF4-202ENST00000374199 TRAPPC2LQ9UL33 140 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms