RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 POC1BQ8TC44 478 aa11.06□□□□□ -0.64
CHCHD1-202ENST00000372837 RTN4IP1Q8WWV3 396 aaPredicted RBP11.06□□□□□ -0.64
CHCHD1-202ENST00000372837 ERGIC1Q969X5 290 aa11.06□□□□□ -0.64
CHCHD1-202ENST00000372837 MRPL24Q96A35 216 aaKnown RBP11.06□□□□□ -0.64
CHCHD1-202ENST00000372837 ISOC2Q96AB3 205 aa11.06□□□□□ -0.64
CHCHD1-202ENST00000372837 MOB3AQ96BX8 217 aa11.06□□□□□ -0.64
CHCHD1-202ENST00000372837 MSI2Q96DH6 328 aaKnown RBP11.06□□□□□ -0.64
CHCHD1-202ENST00000372837 ACY3Q96HD9 319 aa11.06□□□□□ -0.64
CHCHD1-202ENST00000372837 BOD1Q96IK1 185 aa11.06□□□□□ -0.64
CHCHD1-202ENST00000372837 RSRP1Q9BUV0 290 aa11.06□□□□□ -0.64
CHCHD1-202ENST00000372837 METTL9Q9H1A3 318 aa11.06□□□□□ -0.64
CHCHD1-202ENST00000372837 CISD1Q9NZ45 108 aaKnown RBP11.06□□□□□ -0.64
CHCHD1-202ENST00000372837 LSM5Q9Y4Y9 91 aaKnown RBP11.06□□□□□ -0.64
CHCHD1-202ENST00000372837 LHFPL6Q9Y693 200 aa11.06□□□□□ -0.64
CHCHD1-202ENST00000372837 LOC102723996A0A087X1L8 192 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 IGHV3-20A0A0C4DH32 117 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 C17orf51A8MQB3 221 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 H3BML4 177 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 DNPH1O43598 174 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 LMX1BO60663 402 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 HIST1H2BKO60814 126 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 SCAF4O95104 1147 aaKnown RBP11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 LY6G6DO95868 133 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 CYB5R3P00387 301 aaPredicted RBP11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 KNG1P01042 644 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 HIST1H2BJP06899 126 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 HIST1H2BOP23527 126 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 HIST1H2BBP33778 126 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 FOLR3P41439 243 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 NDUFA6P56556 154 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 PIGPP57054 158 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 HIST1H2BDP58876 126 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 HIST1H2BCP62807 126 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 EWSR1Q01844 656 aaKnown RBP eCLIP11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 PCOLCEQ15113 449 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 ZNF124Q15973 351 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 HIST2H2BEQ16778 126 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 ZNF674Q2M3X9 581 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 C10orf128Q5T292 105 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 LINC00696Q6ZRV3 163 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 ZNF429Q86V71 674 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 COMMD2Q86X83 199 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 TMEM156Q8N614 296 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 BHLHE23Q8NDY6 225 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 GJC3Q8NFK1 279 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 HIST1H2BHQ93079 126 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 DNAJA3Q96EY1 480 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 HIST1H2BNQ99877 126 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 HIST1H2BMQ99879 126 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 PYGO2Q9BRQ0 406 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 AGMATQ9BSE5 352 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 WFDC1Q9HC57 220 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 PNRC2Q9NPJ4 139 aaKnown RBP11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 LYRM2Q9NU23 88 aaPredicted RBP11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 PLEKHJ1Q9NW61 149 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 ABI3Q9P2A4 366 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 VAX2Q9UIW0 290 aa11.05□□□□□ -0.64
CHCHD1-202ENST00000372837 IGKV1D-43A0A0B4J1Z2 117 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 SMCO3A2RU48 225 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 LRP5LA4QPB2 252 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 IFITM10A6NMD0 228 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 GJE1A6NN92 205 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 ARG1P05089 322 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 UMODP07911 640 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 CD63P08962 238 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 CTXN2P0C2S0 81 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 MSR1P21757 451 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 OTX1P32242 354 aaPredicted RBP11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 MFAP5Q13361 173 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 CNN3Q15417 329 aaKnown RBP11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 NCMAPQ5T1S8 102 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 ETV3LQ6ZN32 361 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 SHISA6Q6ZSJ9 500 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 ZNF100Q8IYN0 542 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 ZNF283Q8N7M2 679 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 OR2Y1Q8NGV0 311 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 OR2G3Q8NGZ4 309 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 FAM213BQ8TBF2 198 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 CA5BP1Q8WTZ4 195 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 MBD3L1Q8WWY6 194 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 FAM210BQ96KR6 192 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 SPSB2Q99619 263 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 PSMG3Q9BT73 122 aaPredicted RBP11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 SRD5A3Q9H8P0 318 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 ZNF286AQ9HBT8 521 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 FBXO7Q9Y3I1 522 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 WSB1Q9Y6I7 421 aa11.04□□□□□ -0.64
CHCHD1-202ENST00000372837 IGKV1-9A0A0C4DH69 117 aa11.03□□□□□ -0.64
CHCHD1-202ENST00000372837 TRDCB7Z8K6 153 aa11.03□□□□□ -0.64
CHCHD1-202ENST00000372837 GPR37O15354 613 aa11.03□□□□□ -0.64
CHCHD1-202ENST00000372837 OR2J2O76002 312 aa11.03□□□□□ -0.64
CHCHD1-202ENST00000372837 IFNA1P01562 189 aa11.03□□□□□ -0.64
CHCHD1-202ENST00000372837 QDPRP09417 244 aa11.03□□□□□ -0.64
CHCHD1-202ENST00000372837 CCKARP32238 428 aa11.03□□□□□ -0.64
CHCHD1-202ENST00000372837 TAS2R30P59541 319 aa11.03□□□□□ -0.64
CHCHD1-202ENST00000372837 RNPS1Q15287 305 aaKnown RBP11.03□□□□□ -0.64
CHCHD1-202ENST00000372837 SSX2Q16385 188 aa11.03□□□□□ -0.64
CHCHD1-202ENST00000372837 MPV17LQ2QL34 196 aa11.03□□□□□ -0.64
CHCHD1-202ENST00000372837 AKR1C8PQ5T2L2 129 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms