RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 MNX1P50219 401 aaPredicted RBP11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 FAM3BP58499 235 aaPredicted RBP11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 PNRC1Q12796 327 aaPredicted RBP11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 RNFT1Q5M7Z0 435 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 GMPPAQ96IJ6 420 aaPredicted RBP11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 KCNK7Q9Y2U2 307 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 TIMM9Q9Y5J7 89 aa11.7□□□□□ -0.54
RAPGEF1-201ENST00000372189 OGG1O15527 345 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 PATE4P0C8F1 98 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 IRF3Q14653 427 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 PMVKQ15126 192 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 BARX1Q9HBU1 254 aaPredicted RBP11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 TMEM262E9PQX1 116 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 CXCL3P19876 107 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 RSPO4Q2I0M5 234 aaPredicted RBP11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 MYPOPQ86VE0 399 aaPredicted RBP11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 RBFOX3A6NFN3 312 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 GOSR1O95249 250 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 LTBRP36941 435 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 SKP2Q13309 424 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 SPATA45Q537H7 98 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 AWAT1Q58HT5 328 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 SPNS3Q6ZMD2 512 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 ZNF441Q8N8Z8 693 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 SLC26A10Q8NG04 563 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 POM121L2Q96KW2 1035 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 NAT8BQ9UHF3 227 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 ATXN7O15265 892 aaPredicted RBP11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 HYAL3O43820 417 aaPredicted RBP11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 UBE2L3P68036 154 aaKnown RBP11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 LGALSLQ3ZCW2 172 aaPredicted RBP11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 ZNF506Q5JVG8 444 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 FAM181AQ8N9Y4 354 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 CYSLTR1Q9Y271 337 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 ZNF250P15622 560 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 SLC25A30Q5SVS4 291 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 TMEM52Q8NDY8 209 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 MSL2Q9HCI7 577 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 NTMQ9P121 344 aa11.69□□□□□ -0.54
RAPGEF1-201ENST00000372189 SCN10AQ9Y5Y9 1956 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 IGHA1P01876 353 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 Q9N2K0 584 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 TRPM7Q96QT4 1865 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 DIRC3C9JPN6 131 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 C16orf97H3BN30 126 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 OR5D13Q8NGL4 314 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 MEGF9Q9H1U4 602 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 A0A1B0GWB2 263 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 MBPP02686 304 aaPredicted RBP11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 TMEM33P57088 247 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 MGAT2Q10469 447 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 ZNF770Q6IQ21 691 aaPredicted RBP11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 CNTD2Q9H8S5 307 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 PLA2G10O15496 165 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 HOXD4P09016 255 aaPredicted RBP11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 CRISP2P16562 243 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 P2RY1P47900 373 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 OR4S2Q8NH73 311 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 PILRAQ9UKJ1 303 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 DUXBA0A1W2PPF3 345 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 CTLA4P16410 223 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 IGFBP7Q16270 282 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 ABHD3Q8WU67 409 aa11.68□□□□□ -0.54
RAPGEF1-201ENST00000372189 NAT8Q9UHE5 227 aa11.67□□□□□ -0.54
RAPGEF1-201ENST00000372189 ZNF107Q9UII5 783 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF1-201ENST00000372189 OR3A4PP47883 348 aa11.67□□□□□ -0.54
RAPGEF1-201ENST00000372189 ZFP36L2P47974 494 aaKnown RBP11.67□□□□□ -0.54
RAPGEF1-201ENST00000372189 SURF2Q15527 256 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF1-201ENST00000372189 ADAT3Q96EY9 351 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF1-201ENST00000372189 H3BMH7 237 aa11.67□□□□□ -0.54
RAPGEF1-201ENST00000372189 NEURL1O76050 574 aa11.67□□□□□ -0.54
RAPGEF1-201ENST00000372189 MPZL1O95297 269 aa11.67□□□□□ -0.54
RAPGEF1-201ENST00000372189 NGFP01138 241 aa11.67□□□□□ -0.54
RAPGEF1-201ENST00000372189 CTSDP07339 412 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF1-201ENST00000372189 OR5AC1P0C628 307 aa11.67□□□□□ -0.54
RAPGEF1-201ENST00000372189 KLF9Q13886 244 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF1-201ENST00000372189 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF1-201ENST00000372189 A0A1W2PR77 199 aa11.67□□□□□ -0.54
RAPGEF1-201ENST00000372189 FOXL2P58012 376 aa11.67□□□□□ -0.54
RAPGEF1-201ENST00000372189 OR10V1Q8NGI7 309 aa11.67□□□□□ -0.54
RAPGEF1-201ENST00000372189 PTP4A1Q93096 173 aa11.67□□□□□ -0.54
RAPGEF1-201ENST00000372189 M0QZ24 198 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 FCN1O00602 326 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 CDC42EP2O14613 210 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 TRAT1Q6PIZ9 186 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 CBLN2Q8IUK8 224 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 RPS4Y2Q8TD47 263 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 RPEQ96AT9 228 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 WDR61Q9GZS3 305 aaKnown RBP11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 GAGE2BQ13066 116 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 GAGE2EQ4V326 116 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 C1QL3Q5VWW1 255 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 GPR35Q9HC97 309 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 GAGE2DQ9UEU5 116 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 GREB1LQ9C091 1923 aaPredicted RBP11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 KRASP01116 189 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 GNG4P50150 75 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 CALHM1Q8IU99 346 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 ISOC2Q96AB3 205 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 SLC45A2Q9UMX9 530 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms