RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 TMEM38BQ9NVV0 291 aa11.61□□□□□ -0.55
PTPRK-204ENST00000368210 GREB1Q4ZG55 1949 aa11.61□□□□□ -0.55
PTPRK-204ENST00000368210 A0A0J9YW62 118 aa11.61□□□□□ -0.55
PTPRK-204ENST00000368210 ZNF253O75346 499 aa11.61□□□□□ -0.55
PTPRK-204ENST00000368210 ZNF17P17021 662 aa11.61□□□□□ -0.55
PTPRK-204ENST00000368210 TNFRSF1AP19438 455 aa11.61□□□□□ -0.55
PTPRK-204ENST00000368210 SAMD13Q5VXD3 122 aa11.61□□□□□ -0.55
PTPRK-204ENST00000368210 ADGRG7Q96K78 797 aa11.61□□□□□ -0.55
PTPRK-204ENST00000368210 PGLYRP3Q96LB9 341 aa11.61□□□□□ -0.55
PTPRK-204ENST00000368210 OR2H1Q9GZK4 316 aa11.61□□□□□ -0.55
PTPRK-204ENST00000368210 C3orf85A0A1B0GTC6 90 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 A0A1W2PR77 199 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 CHRNA7P36544 502 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 KLF3P57682 345 aaPredicted RBP11.6□□□□□ -0.55
PTPRK-204ENST00000368210 IL13RA2Q14627 380 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 VWCEQ96DN2 955 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 CACFD1Q9UGQ2 172 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 HSF4Q9ULV5 492 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 FZR1Q9UM11 496 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 ONECUT2O95948 504 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 CTSDP07339 412 aaPredicted RBP11.6□□□□□ -0.55
PTPRK-204ENST00000368210 WNT2BQ93097 391 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 AMELYQ99218 206 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 CHST5Q9GZS9 411 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 ZDHHC8Q9ULC8 765 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 ADAM20O43506 726 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 RHBDL1O75783 438 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 CELA2AP08217 269 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 OR10J4P0C629 311 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 IGLV3-21P80748 117 aaPredicted RBP11.6□□□□□ -0.55
PTPRK-204ENST00000368210 MICBQ29980 383 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 SPATA45Q537H7 98 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 OR2M7Q8NG81 312 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 OR10V1Q8NGI7 309 aa11.6□□□□□ -0.55
PTPRK-204ENST00000368210 RGP1Q92546 391 aaPredicted RBP11.6□□□□□ -0.55
PTPRK-204ENST00000368210 RPS16P62249 146 aaKnown RBP11.59□□□□□ -0.55
PTPRK-204ENST00000368210 TMEM267Q0VDI3 215 aaPredicted RBP11.59□□□□□ -0.55
PTPRK-204ENST00000368210 CLEC18BQ6UXF7 455 aa11.59□□□□□ -0.55
PTPRK-204ENST00000368210 BCL2L2Q92843 193 aaPredicted RBP11.59□□□□□ -0.55
PTPRK-204ENST00000368210 C2orf88Q9BSF0 95 aa11.59□□□□□ -0.55
PTPRK-204ENST00000368210 SF3B6Q9Y3B4 125 aaKnown RBP11.59□□□□□ -0.55
PTPRK-204ENST00000368210 A0A1W2PPC1 479 aa11.59□□□□□ -0.55
PTPRK-204ENST00000368210 DLEU1O43261 78 aa11.59□□□□□ -0.55
PTPRK-204ENST00000368210 MDH2P40926 338 aaKnown RBP11.59□□□□□ -0.55
PTPRK-204ENST00000368210 ROM1Q03395 351 aa11.59□□□□□ -0.55
PTPRK-204ENST00000368210 BPIFA4PQ86YQ2 179 aa11.59□□□□□ -0.55
PTPRK-204ENST00000368210 FAM181AQ8N9Y4 354 aa11.59□□□□□ -0.55
PTPRK-204ENST00000368210 GLRX2Q9NS18 164 aa11.59□□□□□ -0.55
PTPRK-204ENST00000368210 SDK2Q58EX2 2172 aa11.59□□□□□ -0.55
PTPRK-204ENST00000368210 MEX3AA1L020 520 aaKnown RBP11.59□□□□□ -0.55
PTPRK-204ENST00000368210 GPX4P36969 197 aaPredicted RBP11.59□□□□□ -0.55
PTPRK-204ENST00000368210 ERHP84090 104 aaKnown RBP11.59□□□□□ -0.55
PTPRK-204ENST00000368210 FA2HQ7L5A8 372 aa11.59□□□□□ -0.55
PTPRK-204ENST00000368210 TMEM183AQ8IXX5 376 aa11.59□□□□□ -0.55
PTPRK-204ENST00000368210 WIPI2Q9Y4P8 454 aa11.59□□□□□ -0.55
PTPRK-204ENST00000368210 TRGC1P0CF51 173 aa11.59□□□□□ -0.55
PTPRK-204ENST00000368210 PMP22Q01453 160 aa11.59□□□□□ -0.55
PTPRK-204ENST00000368210 OR5R1Q8NH85 324 aa11.59□□□□□ -0.55
PTPRK-204ENST00000368210 SAP25Q8TEE9 199 aa11.59□□□□□ -0.55
PTPRK-204ENST00000368210 ZMIZ1Q9ULJ6 1067 aa11.59□□□□□ -0.55
PTPRK-204ENST00000368210 MRPS18BQ9Y676 258 aaKnown RBP11.59□□□□□ -0.55
PTPRK-204ENST00000368210 EFEMP2O95967 443 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 FGF5P12034 268 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 ASCL1P50553 236 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 SLC25A42Q86VD7 318 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 PTX4Q96A99 478 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 MARCH11A6NNE9 402 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 ZNF737O75373 536 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 PGA4P0DJD7 388 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 PGA5P0DJD9 388 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 PMCHL1Q16048 86 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 NIT1Q86X76 327 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 IGLV1-36A0A0B4J1U3 117 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 TRBV5-5A0A0J9YX44 114 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 HAND1O96004 215 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 ANKRD34CP0C6C1 535 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 NHLH1Q02575 133 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 KHDC3LQ587J8 217 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 FAM27BQ5VT28 67 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 SLC35E3Q7Z769 313 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 RAB40CQ96S21 281 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 HSPB9Q9BQS6 159 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 RLFQ13129 1914 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 IGKV1D-42A0A075B6H8 117 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 UPK3AO75631 287 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 ZXDAP98168 799 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 OR2C3Q8N628 320 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 ZNRF4Q8WWF5 429 aa11.58□□□□□ -0.56
PTPRK-204ENST00000368210 MBPP02686 304 aaPredicted RBP11.57□□□□□ -0.56
PTPRK-204ENST00000368210 SPINK2P20155 84 aa11.57□□□□□ -0.56
PTPRK-204ENST00000368210 UBE2G1P62253 170 aa11.57□□□□□ -0.56
PTPRK-204ENST00000368210 LRRC29Q8WV35 223 aa11.57□□□□□ -0.56
PTPRK-204ENST00000368210 NEIL1Q96FI4 390 aaPredicted RBP11.57□□□□□ -0.56
PTPRK-204ENST00000368210 KCNK17Q96T54 332 aa11.57□□□□□ -0.56
PTPRK-204ENST00000368210 VAX2Q9UIW0 290 aa11.57□□□□□ -0.56
PTPRK-204ENST00000368210 CLDN16Q9Y5I7 305 aa11.57□□□□□ -0.56
PTPRK-204ENST00000368210 RTTNQ86VV8 2226 aa11.57□□□□□ -0.56
PTPRK-204ENST00000368210 TAS2R45P59539 299 aa11.57□□□□□ -0.56
PTPRK-204ENST00000368210 AICDAQ9GZX7 198 aa11.57□□□□□ -0.56
PTPRK-204ENST00000368210 KIAA1456Q9P272 454 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms