RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 C2orf88Q9BSF0 95 aa12.61□□□□□ -0.39
PRKN-204ENST00000366896 ST3GAL6Q9Y274 331 aa12.61□□□□□ -0.39
PRKN-204ENST00000366896 MRPS18CQ9Y3D5 142 aaKnown RBP12.61□□□□□ -0.39
PRKN-204ENST00000366896 ZNF816-ZNF321PA0A0X1KG74 233 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 MKRN2OSH3BPM6 223 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 HSPA12AO43301 675 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 TGOLN2O43493 480 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 FUT3P21217 361 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 PSG4Q00888 419 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 SLC35G3Q8N808 338 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 CLDND2Q8NHS1 167 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 RCC1LQ96I51 464 aaKnown RBP12.6□□□□□ -0.39
PRKN-204ENST00000366896 PACRGQ96M98 296 aaPredicted RBP12.6□□□□□ -0.39
PRKN-204ENST00000366896 FOXB1Q99853 325 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 OR2H1Q9GZK4 316 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 SLC25A31Q9H0C2 315 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 HIPK2Q9H2X6 1198 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 ZNF732B4DXR9 585 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 PHOX2AO14813 284 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 PHF1O43189 567 aaPredicted RBP12.6□□□□□ -0.39
PRKN-204ENST00000366896 SERPINA7P05543 415 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 CARD18P57730 90 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 HLA-DRB3P79483 266 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 ZNF92Q03936 586 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 DCAF10Q5QP82 559 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 GGNQ86UU5 652 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 C1orf87Q8N0U7 546 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 RBMXL1Q96E39 390 aaKnown RBP12.6□□□□□ -0.39
PRKN-204ENST00000366896 ADGRG7Q96K78 797 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 TMEM56Q96MV1 263 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 WNT5BQ9H1J7 359 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 TMEM56-RWDD3S4R434 201 aa12.6□□□□□ -0.39
PRKN-204ENST00000366896 DUXBA0A1W2PPF3 345 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 NKX2-8O15522 239 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 IL2RGP31785 369 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 RND2P52198 227 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 HERV-K104P61576 105 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 DAZAP2Q15038 168 aaPredicted RBP12.59□□□□□ -0.39
PRKN-204ENST00000366896 AAED1Q7RTV5 226 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 DPPA2Q7Z7J5 298 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 OR10G4Q8NGN3 311 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 HIST1H2BLQ99880 126 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 PRDM14Q9GZV8 571 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 PLEKHF2Q9H8W4 249 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 NCKAP5O14513 1909 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 SSX2Q16385 188 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 GNPNAT1Q96EK6 184 aaPredicted RBP12.59□□□□□ -0.39
PRKN-204ENST00000366896 TP53RKQ96S44 253 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 SPIN2AQ99865 258 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 SSX3Q99909 188 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 SPIN2BQ9BPZ2 258 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 C1QTNF5Q9BXJ0 243 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 LYRM2Q9NU23 88 aaPredicted RBP12.59□□□□□ -0.39
PRKN-204ENST00000366896 TMEM242Q9NWH2 141 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 ASPMQ8IZT6 3477 aa12.59□□□□□ -0.39
PRKN-204ENST00000366896 SMCO3A2RU48 225 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 CLEC18AA5D8T8 446 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 MPPED1O15442 326 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 ZNHIT1O43257 154 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 CXCL13O43927 109 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 PPYP01298 95 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 RFPL3SP0C7P2 107 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 AADACP22760 399 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 CEACAM6P40199 344 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 SPCS3P61009 180 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 AKR1C8PQ5T2L2 129 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 COLCA1Q6ZS62 124 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 C5orf24Q7Z6I8 188 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 SAXO1Q8IYX7 474 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 TMEM252Q8N6L7 170 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 CLEC18CQ8NCF0 446 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 MISP3Q96FF7 219 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 FER1L6-AS2Q96M78 137 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 TMEM222Q9H0R3 208 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 DOCK10Q96BY6 2186 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 SHANK1Q9Y566 2161 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 C3orf85A0A1B0GTC6 90 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 NKX2-6A6NCS4 301 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 TRDCB7Z8K6 153 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 ATXN7O15265 892 aaPredicted RBP12.58□□□□□ -0.4
PRKN-204ENST00000366896 OMGP23515 440 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 NKX2-1P43699 371 aaPredicted RBP12.58□□□□□ -0.4
PRKN-204ENST00000366896 CLDN15P56746 228 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 RPL23AP62750 156 aaKnown RBP12.58□□□□□ -0.4
PRKN-204ENST00000366896 CEACAM16Q2WEN9 425 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 PLCXD3Q63HM9 321 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 MEX3BQ6ZN04 569 aaKnown RBP12.58□□□□□ -0.4
PRKN-204ENST00000366896 CALHM1Q8IU99 346 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 OR5C1Q8NGR4 320 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 PSMF1Q92530 271 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 PIGCQ92535 297 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 TMEM45BQ96B21 275 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 THOC3Q96J01 351 aaKnown RBP12.58□□□□□ -0.4
PRKN-204ENST00000366896 GLRX2Q9NS18 164 aa12.58□□□□□ -0.4
PRKN-204ENST00000366896 KLK10O43240 276 aa12.57□□□□□ -0.4
PRKN-204ENST00000366896 HBE1P02100 147 aa12.57□□□□□ -0.4
PRKN-204ENST00000366896 MMP7P09237 267 aaPredicted RBP12.57□□□□□ -0.4
PRKN-204ENST00000366896 MMP9P14780 707 aa12.57□□□□□ -0.4
PRKN-204ENST00000366896 TLE4Q04727 773 aa12.57□□□□□ -0.4
PRKN-204ENST00000366896 OR2V1Q8NHB1 315 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms