RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 PSKH1P11801 424 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 ZNF708P17019 499 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 F8A1P23610 371 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 CRABP2P29373 138 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 CD40LGP29965 261 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 RPL14P50914 215 aaKnown RBP1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 IHHQ14623 411 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 ZNF141Q15928 474 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 CLEC12BQ2HXU8 276 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 LGALSLQ3ZCW2 172 aaPredicted RBP1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 CENPWQ5EE01 88 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 SPIN3Q5JUX0 258 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 SDHAF4Q5VUM1 108 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 SPNS3Q6ZMD2 512 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 EIF4E3Q8N5X7 224 aaKnown RBP1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 Q8NAQ8 132 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 OR5K1Q8NHB7 308 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 STOML3Q8TAV4 291 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 GALMQ96C23 342 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 SMIM12Q96EX1 92 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 TRIB3Q96RU7 358 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 UBQLN4Q9NRR5 601 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 ZNHIT6Q9NWK9 470 aaKnown RBP1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 TMEM216Q9P0N5 145 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 ZNF230Q9UIE0 474 aaPredicted RBP1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 C15orf41Q9Y2V0 281 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 LINC00588Q9Y4M8 146 aa1.87□□□□□ -2.11
RNU6-28P-201ENST00000362378 SHANK1Q9Y566 2161 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 C1orf232A0A0U1RR37 186 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 H3BSA7 217 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 M0QYV0 167 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 SH2D1AO60880 128 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 ADAP1O75689 374 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 OPN1SWP03999 348 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 TPM3P06753 285 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 GUSBP08236 651 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 HIST1H1CP16403 213 aaKnown RBP1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 GADD45AP24522 165 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 PYCR3Q53H96 274 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 C10orf91Q5T1B1 145 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 XKRXQ6PP77 449 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 DRAM2Q6UX65 266 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 TCF23Q7RTU1 214 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 FUNDC1Q8IVP5 155 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 FAM9CQ8IZT9 166 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 C2orf73Q8N5S3 287 aaPredicted RBP1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 OR11G2Q8NGC1 345 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 ZNRF2Q8NHG8 242 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 RBP7Q96R05 134 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 PKMYT1Q99640 499 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 DCUN1D5Q9BTE7 237 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 ARL6Q9H0F7 186 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 METTL9Q9H1A3 318 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 ZNF286AQ9HBT8 521 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 ZNF391Q9UJN7 358 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 PSMD13Q9UNM6 376 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 PHLDA3Q9Y5J5 127 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 ATP6V1DQ9Y5K8 247 aa1.86□□□□□ -2.11
RNU6-28P-201ENST00000362378 SHROOM3Q8TF72 1996 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 RIMS2Q9UQ26 1411 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 IGKV1-12A0A0C4DH73 117 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 CCRL2O00421 344 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 LECT2O14960 151 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 DENRO43583 198 aaKnown RBP1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 SYNGR2O43760 224 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 ASS1P00966 412 aaKnown RBP1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 IGKV1D-12P01611 117 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 AGTR1P30556 359 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 EMP2P54851 167 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 TPM4P67936 248 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 C4orf26Q17RF5 130 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 TBC1D28Q2M2D7 210 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 PP632Q6XCG6 107 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 LRP11Q86VZ4 500 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 LYPD6Q86Y78 171 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 ZBTB8OSQ8IWT0 167 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 IQCF2Q8IXL9 164 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 CMTM2Q8TAZ6 248 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 DNAJB3Q8WWF6 145 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 SLC25A44Q96H78 314 aaPredicted RBP1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 IGF2BP2-AS1Q96M15 143 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 POTEKPQ9BYX7 375 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 BCL2L14Q9BZR8 327 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 GTSF1LQ9H1H1 148 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 C11orf49Q9H6J7 331 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 KCNIP2Q9NS61 270 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 SLC23A2Q9UGH3 650 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 TP53TG1Q9Y2A0 90 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 NOSIPQ9Y314 301 aaKnown RBP1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 MTCH2Q9Y6C9 303 aa1.85□□□□□ -2.11
RNU6-28P-201ENST00000362378 ZSWIM8A7E2V4 1837 aa1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 DAPL1A0PJW8 107 aa1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 ATP8B1O43520 1251 aa1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 PSCAO43653 123 aa1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 HPGDSO60760 199 aa1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 ATP6V1G2O95670 118 aa1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 FBP1P09467 338 aa1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 GRPRP30550 384 aa1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 CLDN12P56749 244 aa1.84□□□□□ -2.11
RNU6-28P-201ENST00000362378 APOFQ13790 326 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms