RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 IFI6P09912 130 aa12.04□□□□□ -0.48
COL6A1-201ENST00000361866 BCL2P10415 239 aa12.04□□□□□ -0.48
COL6A1-201ENST00000361866 FAM3BP58499 235 aaPredicted RBP12.04□□□□□ -0.48
COL6A1-201ENST00000361866 TIGITQ495A1 244 aa12.04□□□□□ -0.48
COL6A1-201ENST00000361866 FAM27BQ5VT28 67 aa12.04□□□□□ -0.48
COL6A1-201ENST00000361866 TUSC5Q8IXB3 177 aa12.04□□□□□ -0.48
COL6A1-201ENST00000361866 MSI2Q96DH6 328 aaKnown RBP12.04□□□□□ -0.48
COL6A1-201ENST00000361866 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.04□□□□□ -0.48
COL6A1-201ENST00000361866 RFNGQ9Y644 331 aa12.04□□□□□ -0.48
COL6A1-201ENST00000361866 ELOA3CA0A087WX78 387 aaPredicted RBP12.04□□□□□ -0.48
COL6A1-201ENST00000361866 A0A1B0GTQ1 180 aa12.04□□□□□ -0.48
COL6A1-201ENST00000361866 CST2P09228 141 aa12.04□□□□□ -0.48
COL6A1-201ENST00000361866 CDC34P49427 236 aaPredicted RBP12.04□□□□□ -0.48
COL6A1-201ENST00000361866 CADM4Q8NFZ8 388 aa12.04□□□□□ -0.48
COL6A1-201ENST00000361866 CDX2Q99626 313 aaPredicted RBP12.04□□□□□ -0.48
COL6A1-201ENST00000361866 TPPP3Q9BW30 176 aa12.04□□□□□ -0.48
COL6A1-201ENST00000361866 ZNF391Q9UJN7 358 aa12.04□□□□□ -0.48
COL6A1-201ENST00000361866 PITPNC1Q9UKF7 332 aa12.04□□□□□ -0.48
COL6A1-201ENST00000361866 MYO7BQ6PIF6 2116 aa12.04□□□□□ -0.48
COL6A1-201ENST00000361866 NEIL1Q96FI4 390 aaPredicted RBP12.03□□□□□ -0.48
COL6A1-201ENST00000361866 ZNF331Q9NQX6 463 aaPredicted RBP12.03□□□□□ -0.48
COL6A1-201ENST00000361866 SIRT7Q9NRC8 400 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 ZNF586Q9NXT0 402 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 TAAR3PQ9P1P4 343 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 PCNX1Q96RV3 2341 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 HELZP42694 1942 aaKnown RBP12.03□□□□□ -0.48
COL6A1-201ENST00000361866 A0A1W2PPE3 182 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 COLCA2A8K830 154 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 C11orf94C9JXX5 98 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 F8VVB4 439 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 F8VWA3 439 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 M0R1X1 148 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 F2RP25116 425 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 G6PCP35575 357 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 SLC10A1Q14973 349 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 C6orf15Q6UXA7 325 aaPredicted RBP12.03□□□□□ -0.48
COL6A1-201ENST00000361866 NUFIP2Q7Z417 695 aaKnown RBP12.03□□□□□ -0.48
COL6A1-201ENST00000361866 OR10S1Q8NGN2 331 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 CIB3Q96Q77 187 aaPredicted RBP12.03□□□□□ -0.48
COL6A1-201ENST00000361866 SMOC1Q9H4F8 434 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 CLEC1BQ9P126 229 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 CLCF1Q9UBD9 225 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 CLN8Q9UBY8 286 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 IL17BQ9UHF5 180 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 PITX3O75364 302 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 HLA-GP17693 338 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 SUPT4H1P63272 117 aaKnown RBP12.03□□□□□ -0.48
COL6A1-201ENST00000361866 ASPHD2Q6ICH7 369 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 C16orf82Q7Z2V1 217 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 MRGPRGQ86SM5 289 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 SLC25A45Q8N413 288 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 TPRX1Q8N7U7 411 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 DAZAP1Q96EP5 407 aaKnown RBP12.03□□□□□ -0.48
COL6A1-201ENST00000361866 PCGF1Q9BSM1 259 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 CYTL1Q9NRR1 136 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 OR2W1Q9Y3N9 320 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 IGSF23A1L1A6 192 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 KLRC4-KLRK1H3BQV0 150 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 TCL1AP56279 114 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 PKIAP61925 76 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 RPS23P62266 143 aaKnown RBP12.03□□□□□ -0.48
COL6A1-201ENST00000361866 FNDC7Q5VTL7 733 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 MOB3AQ96BX8 217 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 NAT8BQ9UHF3 227 aa12.03□□□□□ -0.48
COL6A1-201ENST00000361866 LIFP15018 202 aa12.02□□□□□ -0.48
COL6A1-201ENST00000361866 SRD5A2P31213 254 aa12.02□□□□□ -0.48
COL6A1-201ENST00000361866 SMRP1Q8NCR6 262 aa12.02□□□□□ -0.48
COL6A1-201ENST00000361866 SSMEM1Q8WWF3 244 aa12.02□□□□□ -0.48
COL6A1-201ENST00000361866 TECTBQ96PL2 329 aa12.02□□□□□ -0.48
COL6A1-201ENST00000361866 RPRMQ9NS64 109 aa12.02□□□□□ -0.48
COL6A1-201ENST00000361866 COLQQ9Y215 455 aaPredicted RBP12.02□□□□□ -0.48
COL6A1-201ENST00000361866 RPL36A-HNRNPH2H7BZ11 118 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 FCN1O00602 326 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 WISP1O95388 367 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 IGHEP01854 428 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 EGR1P18146 543 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 CCL20P78556 96 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 EIF3IQ13347 325 aaKnown RBP12.02□□□□□ -0.49
COL6A1-201ENST00000361866 SSX7Q7RTT5 188 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 VAMP8Q9BV40 100 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 GPR35Q9HC97 309 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 PAM16Q9Y3D7 125 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 TRPM7Q96QT4 1865 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 DOCK10Q96BY6 2186 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 MED13LQ71F56 2210 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 ZNF407Q9C0G0 2248 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 ENSAO43768 121 aaKnown RBP12.02□□□□□ -0.49
COL6A1-201ENST00000361866 NPIPB7O75200 414 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 DDTP30046 118 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 OR8B8Q15620 311 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 ACSM6Q6P461 480 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 C10orf35Q96D05 121 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 TMEM9BQ9NQ34 198 aa12.02□□□□□ -0.49
COL6A1-201ENST00000361866 DOCK11Q5JSL3 2073 aa12.01□□□□□ -0.49
COL6A1-201ENST00000361866 SYNGR1O43759 233 aa12.01□□□□□ -0.49
COL6A1-201ENST00000361866 CCL11P51671 97 aa12.01□□□□□ -0.49
COL6A1-201ENST00000361866 PLGLAQ15195 96 aa12.01□□□□□ -0.49
COL6A1-201ENST00000361866 FAM166AQ6J272 317 aa12.01□□□□□ -0.49
COL6A1-201ENST00000361866 ZNF818PQ6ZRF7 136 aa12.01□□□□□ -0.49
COL6A1-201ENST00000361866 BOD1Q96IK1 185 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms