RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 ZNF98A6NK75 572 aa19.16■□□□□ 0.66
LDB1-201ENST00000361198 H0YL77 283 aa19.16■□□□□ 0.66
LDB1-201ENST00000361198 CDIPTO14735 213 aa19.16■□□□□ 0.66
LDB1-201ENST00000361198 DEGS1O15121 323 aa19.16■□□□□ 0.66
LDB1-201ENST00000361198 TUSC2O75896 110 aa19.16■□□□□ 0.66
LDB1-201ENST00000361198 GNMTQ14749 295 aa19.16■□□□□ 0.66
LDB1-201ENST00000361198 ZNF818PQ6ZRF7 136 aa19.16■□□□□ 0.66
LDB1-201ENST00000361198 IFT22Q9H7X7 185 aa19.16■□□□□ 0.66
LDB1-201ENST00000361198 C19orf12Q9NSK7 152 aa19.16■□□□□ 0.66
LDB1-201ENST00000361198 WDR1O75083 606 aa19.16■□□□□ 0.66
LDB1-201ENST00000361198 SELEP16581 610 aa19.16■□□□□ 0.66
LDB1-201ENST00000361198 CAMLGP49069 296 aa19.16■□□□□ 0.66
LDB1-201ENST00000361198 FHITP49789 147 aa19.16■□□□□ 0.66
LDB1-201ENST00000361198 ERVK11-1P61568 191 aa19.16■□□□□ 0.66
LDB1-201ENST00000361198 RND3P61587 244 aa19.16■□□□□ 0.66
LDB1-201ENST00000361198 ZNF616Q08AN1 781 aa19.16■□□□□ 0.66
LDB1-201ENST00000361198 SPIN3Q5JUX0 258 aa19.16■□□□□ 0.66
LDB1-201ENST00000361198 PCSK4Q6UW60 755 aa19.16■□□□□ 0.66
LDB1-201ENST00000361198 ZNF610Q8N9Z0 462 aa19.16■□□□□ 0.66
LDB1-201ENST00000361198 C1orf162Q8NEQ5 155 aaPredicted RBP19.16■□□□□ 0.66
LDB1-201ENST00000361198 TRBV6-6A0A0A6YYG2 114 aa19.15■□□□□ 0.66
LDB1-201ENST00000361198 IGFL3Q6UXB1 125 aa19.15■□□□□ 0.66
LDB1-201ENST00000361198 MEX3BQ6ZN04 569 aaKnown RBP19.15■□□□□ 0.66
LDB1-201ENST00000361198 SEM1Q6ZVN7 128 aa19.15■□□□□ 0.66
LDB1-201ENST00000361198 TBC1D26Q86UD7 250 aa19.15■□□□□ 0.66
LDB1-201ENST00000361198 CXorf67Q86X51 503 aaPredicted RBP19.15■□□□□ 0.66
LDB1-201ENST00000361198 GAPTQ8N292 157 aa19.15■□□□□ 0.66
LDB1-201ENST00000361198 STARD4Q96DR4 205 aa19.15■□□□□ 0.66
LDB1-201ENST00000361198 GPHA2Q96T91 129 aa19.15■□□□□ 0.66
LDB1-201ENST00000361198 OPN3Q9H1Y3 402 aaPredicted RBP19.15■□□□□ 0.66
LDB1-201ENST00000361198 SH3BGRL3Q9H299 93 aa19.15■□□□□ 0.66
LDB1-201ENST00000361198 CTXN2P0C2S0 81 aa19.14■□□□□ 0.66
LDB1-201ENST00000361198 EWSR1Q01844 656 aaKnown RBP eCLIP19.14■□□□□ 0.66
LDB1-201ENST00000361198 ETV3LQ6ZN32 361 aa19.14■□□□□ 0.66
LDB1-201ENST00000361198 ZNF565Q8N9K5 539 aa19.14■□□□□ 0.66
LDB1-201ENST00000361198 COA4Q9NYJ1 87 aa19.14■□□□□ 0.66
LDB1-201ENST00000361198 POLDIP2Q9Y2S7 368 aa19.14■□□□□ 0.66
LDB1-201ENST00000361198 NKX2-6A6NCS4 301 aa19.14■□□□□ 0.65
LDB1-201ENST00000361198 NBL1P41271 181 aa19.14■□□□□ 0.65
LDB1-201ENST00000361198 RPL35P42766 123 aaKnown RBP19.14■□□□□ 0.65
LDB1-201ENST00000361198 ZNF880Q6PDB4 577 aa19.14■□□□□ 0.65
LDB1-201ENST00000361198 OR2C3Q8N628 320 aa19.14■□□□□ 0.65
LDB1-201ENST00000361198 TUBA4BQ9H853 241 aa19.14■□□□□ 0.65
LDB1-201ENST00000361198 GRPP07492 148 aa19.13■□□□□ 0.65
LDB1-201ENST00000361198 PGA5P0DJD9 388 aa19.13■□□□□ 0.65
LDB1-201ENST00000361198 AKR1D1P51857 326 aa19.13■□□□□ 0.65
LDB1-201ENST00000361198 OR8G1Q15617 311 aa19.13■□□□□ 0.65
LDB1-201ENST00000361198 HEATR1Q9H583 2144 aaKnown RBP19.13■□□□□ 0.65
LDB1-201ENST00000361198 TINAGQ9UJW2 476 aa19.13■□□□□ 0.65
LDB1-201ENST00000361198 SIRPB1O00241 398 aa19.13■□□□□ 0.65
LDB1-201ENST00000361198 C1QL1O75973 258 aa19.13■□□□□ 0.65
LDB1-201ENST00000361198 OR2H2O95918 312 aa19.13■□□□□ 0.65
LDB1-201ENST00000361198 CGAP01215 116 aa19.13■□□□□ 0.65
LDB1-201ENST00000361198 CECR9P0C854 216 aa19.13■□□□□ 0.65
LDB1-201ENST00000361198 Q8IYB0 196 aa19.13■□□□□ 0.65
LDB1-201ENST00000361198 HSD17B11Q8NBQ5 300 aa19.13■□□□□ 0.65
LDB1-201ENST00000361198 ABHD14BQ96IU4 210 aa19.13■□□□□ 0.65
LDB1-201ENST00000361198 CLCC1Q96S66 551 aa19.13■□□□□ 0.65
LDB1-201ENST00000361198 CCL28Q9NRJ3 127 aa19.13■□□□□ 0.65
LDB1-201ENST00000361198 PROCRQ9UNN8 238 aa19.13■□□□□ 0.65
LDB1-201ENST00000361198 PTPRZ1P23471 2315 aaPredicted RBP19.12■□□□□ 0.65
LDB1-201ENST00000361198 A0A1B0GW64 132 aa19.12■□□□□ 0.65
LDB1-201ENST00000361198 K7N7A8 449 aa19.12■□□□□ 0.65
LDB1-201ENST00000361198 PRH1P02810 166 aa19.12■□□□□ 0.65
LDB1-201ENST00000361198 SPIN2AQ99865 258 aa19.12■□□□□ 0.65
LDB1-201ENST00000361198 SPIN2BQ9BPZ2 258 aa19.12■□□□□ 0.65
LDB1-201ENST00000361198 OBP2BQ9NPH6 170 aa19.12■□□□□ 0.65
LDB1-201ENST00000361198 ZNF71Q9NQZ8 489 aaPredicted RBP19.12■□□□□ 0.65
LDB1-201ENST00000361198 SPTBN2O15020 2390 aa19.12■□□□□ 0.65
LDB1-201ENST00000361198 CLEC18AA5D8T8 446 aa19.12■□□□□ 0.65
LDB1-201ENST00000361198 SLC33A1O00400 549 aaPredicted RBP19.12■□□□□ 0.65
LDB1-201ENST00000361198 HSD17B6O14756 317 aa19.12■□□□□ 0.65
LDB1-201ENST00000361198 MLNRO43193 412 aa19.12■□□□□ 0.65
LDB1-201ENST00000361198 IFNA4P05014 189 aa19.12■□□□□ 0.65
LDB1-201ENST00000361198 NKX2-1P43699 371 aaPredicted RBP19.12■□□□□ 0.65
LDB1-201ENST00000361198 HLA-DRB3P79483 266 aa19.12■□□□□ 0.65
LDB1-201ENST00000361198 RNF212Q495C1 297 aa19.12■□□□□ 0.65
LDB1-201ENST00000361198 CLEC18CQ8NCF0 446 aa19.12■□□□□ 0.65
LDB1-201ENST00000361198 PLPPR1Q8TBJ4 325 aa19.12■□□□□ 0.65
LDB1-201ENST00000361198 C14orf79Q96F83 325 aa19.12■□□□□ 0.65
LDB1-201ENST00000361198 EIF5A2Q9GZV4 153 aaKnown RBP19.12■□□□□ 0.65
LDB1-201ENST00000361198 RPS10P5Q9NQ39 176 aa19.12■□□□□ 0.65
LDB1-201ENST00000361198 MAP1BP46821 2468 aaKnown RBP19.11■□□□□ 0.65
LDB1-201ENST00000361198 TRAV39A0A0B4J263 110 aa19.11■□□□□ 0.65
LDB1-201ENST00000361198 NXPH2O95156 264 aa19.11■□□□□ 0.65
LDB1-201ENST00000361198 HABP2Q14520 560 aaPredicted RBP19.11■□□□□ 0.65
LDB1-201ENST00000361198 ZNF266Q14584 549 aa19.11■□□□□ 0.65
LDB1-201ENST00000361198 AWAT1Q58HT5 328 aa19.11■□□□□ 0.65
LDB1-201ENST00000361198 ZNF695Q8IW36 515 aa19.11■□□□□ 0.65
LDB1-201ENST00000361198 SELENOHQ8IZQ5 122 aaKnown RBP19.11■□□□□ 0.65
LDB1-201ENST00000361198 LFNGQ8NES3 379 aa19.11■□□□□ 0.65
LDB1-201ENST00000361198 HIST1H2BAQ96A08 127 aa19.11■□□□□ 0.65
LDB1-201ENST00000361198 UBE2J1Q9Y385 318 aaPredicted RBP19.11■□□□□ 0.65
LDB1-201ENST00000361198 DUXBA0A1W2PPF3 345 aa19.11■□□□□ 0.65
LDB1-201ENST00000361198 C7orf77A4D0Y5 90 aa19.11■□□□□ 0.65
LDB1-201ENST00000361198 MBD3L4A6NDZ8 208 aaPredicted RBP19.11■□□□□ 0.65
LDB1-201ENST00000361198 MBD3L3A6NE82 208 aaPredicted RBP19.11■□□□□ 0.65
LDB1-201ENST00000361198 MBD3L5A6NJ08 208 aaPredicted RBP19.11■□□□□ 0.65
LDB1-201ENST00000361198 Q6ZS92 163 aa19.11■□□□□ 0.65
LDB1-201ENST00000361198 OR8G5Q8NG78 346 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms