RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 IGHV1OR21-1A0A087WYE8 117 aa12.15□□□□□ -0.46
SMC5-201ENST00000361138 FGF16O43320 207 aa12.15□□□□□ -0.46
SMC5-201ENST00000361138 IGHMP01871 453 aa12.15□□□□□ -0.46
SMC5-201ENST00000361138 FOLR2P14207 255 aa12.15□□□□□ -0.46
SMC5-201ENST00000361138 ZNF718Q3SXZ3 478 aa12.15□□□□□ -0.46
SMC5-201ENST00000361138 ARID1BQ8NFD5 2236 aaPredicted RBP12.15□□□□□ -0.46
SMC5-201ENST00000361138 PDCD11Q14690 1871 aaKnown RBP12.15□□□□□ -0.46
SMC5-201ENST00000361138 PSME4Q14997 1843 aa12.15□□□□□ -0.46
SMC5-201ENST00000361138 F8VVB4 439 aa12.15□□□□□ -0.46
SMC5-201ENST00000361138 F8VWA3 439 aa12.15□□□□□ -0.46
SMC5-201ENST00000361138 SPINT1O43278 529 aa12.15□□□□□ -0.46
SMC5-201ENST00000361138 SP1P08047 785 aa12.15□□□□□ -0.46
SMC5-201ENST00000361138 TMEM11P17152 192 aa12.15□□□□□ -0.46
SMC5-201ENST00000361138 ARL16Q0P5N6 197 aa12.15□□□□□ -0.46
SMC5-201ENST00000361138 PSG5Q15238 335 aa12.15□□□□□ -0.46
SMC5-201ENST00000361138 CARFQ8N187 725 aa12.15□□□□□ -0.46
SMC5-201ENST00000361138 CPEB3Q8NE35 698 aaKnown RBP12.15□□□□□ -0.46
SMC5-201ENST00000361138 ZNF738Q8NE65 137 aa12.15□□□□□ -0.46
SMC5-201ENST00000361138 MRGPRDQ8TDS7 321 aa12.15□□□□□ -0.46
SMC5-201ENST00000361138 SMIM10L1P0DMW3 83 aa12.15□□□□□ -0.47
SMC5-201ENST00000361138 HTR1DP28221 377 aa12.15□□□□□ -0.47
SMC5-201ENST00000361138 SMIM10Q96HG1 83 aa12.15□□□□□ -0.47
SMC5-201ENST00000361138 KLF13Q9Y2Y9 288 aaPredicted RBP12.15□□□□□ -0.47
SMC5-201ENST00000361138 DICER1Q9UPY3 1922 aaKnown RBP12.14□□□□□ -0.47
SMC5-201ENST00000361138 HELTA6NFD8 242 aa12.14□□□□□ -0.47
SMC5-201ENST00000361138 SLC22A20A6NK97 555 aa12.14□□□□□ -0.47
SMC5-201ENST00000361138 OR5AL1P0C617 328 aa12.14□□□□□ -0.47
SMC5-201ENST00000361138 HSD17B10Q99714 261 aaKnown RBP12.14□□□□□ -0.47
SMC5-201ENST00000361138 PATJQ8NI35 1801 aa12.14□□□□□ -0.47
SMC5-201ENST00000361138 OOEPA6NGQ2 149 aa12.14□□□□□ -0.47
SMC5-201ENST00000361138 TMEM92Q6UXU6 159 aa12.14□□□□□ -0.47
SMC5-201ENST00000361138 CLN8Q9UBY8 286 aa12.14□□□□□ -0.47
SMC5-201ENST00000361138 A0A087WWC5 75 aa12.14□□□□□ -0.47
SMC5-201ENST00000361138 TRGV10A0A0A0MS01 117 aa12.14□□□□□ -0.47
SMC5-201ENST00000361138 PLPPR5Q32ZL2 321 aa12.14□□□□□ -0.47
SMC5-201ENST00000361138 SLC25A28Q96A46 364 aa12.14□□□□□ -0.47
SMC5-201ENST00000361138 COA4Q9NYJ1 87 aa12.14□□□□□ -0.47
SMC5-201ENST00000361138 NINQ8N4C6 2090 aa12.14□□□□□ -0.47
SMC5-201ENST00000361138 CASP6P55212 293 aa12.14□□□□□ -0.47
SMC5-201ENST00000361138 OR8G5Q8NG78 346 aa12.14□□□□□ -0.47
SMC5-201ENST00000361138 ST8SIA5O15466 376 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 CYB5R2Q6BCY4 276 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 OR1L4Q8NGR5 311 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 PRSS3P2Q8NHM4 247 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 RFESDQ8TAC1 157 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 BOD1Q96IK1 185 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 WASHC3Q9Y3C0 194 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 LOC101059948A0A1B0GTJ6 334 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 RAB7AP51149 207 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 RPS23P62266 143 aaKnown RBP12.13□□□□□ -0.47
SMC5-201ENST00000361138 UNC119Q13432 240 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 HLA-BQ31612 363 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 ALKBH6Q3KRA9 238 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 OR2M3Q8NG83 312 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 SSMEM1Q8WWF3 244 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 ADIPOR1Q96A54 375 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 RNF2Q99496 336 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 BMPR1BO00238 502 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 POU2F2P09086 479 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 OPRK1P41145 380 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 CTHRC1Q96CG8 243 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 GALNT14Q96FL9 552 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 GDF15Q99988 308 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 RTBDNQ9BSG5 229 aaPredicted RBP12.13□□□□□ -0.47
SMC5-201ENST00000361138 RNF126Q9BV68 326 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 SIT1Q9Y3P8 196 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 CD82P27701 267 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 HIST3H3Q16695 136 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 Q56UQ5 140 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.13□□□□□ -0.47
SMC5-201ENST00000361138 DEFB108BQ8NET1 73 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 BLNKQ8WV28 456 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 HES4Q9HCC6 221 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 TMEM38BQ9NVV0 291 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 PLXNA1Q9UIW2 1896 aa12.13□□□□□ -0.47
SMC5-201ENST00000361138 F2RP25116 425 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 TP53RKQ96S44 253 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 TMEM204Q9BSN7 226 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 RPP25Q9BUL9 199 aaKnown RBP12.12□□□□□ -0.47
SMC5-201ENST00000361138 MS4A18H0YCH9 400 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 TSPAN2O60636 221 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 NDUFB4O95168 129 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 RAC3P60763 192 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 UBE2L3P68036 154 aaKnown RBP12.12□□□□□ -0.47
SMC5-201ENST00000361138 MS4A18Q3C1V0 323 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 VWA1Q6PCB0 445 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 NDFIP1Q9BT67 221 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 SRD5A3Q9H8P0 318 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 FAM157CP0CG43 387 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 HINT1P49773 126 aaPredicted RBP12.12□□□□□ -0.47
SMC5-201ENST00000361138 VASH2Q86V25 355 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 ZBTB34Q8NCN2 500 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 BCL2L2Q92843 193 aaPredicted RBP12.12□□□□□ -0.47
SMC5-201ENST00000361138 GFI1Q99684 422 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 M0R1B8 84 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 MELTFP08582 738 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 SRD5A2P31213 254 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 PPOXP50336 477 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 WDFY1Q8IWB7 410 aa12.12□□□□□ -0.47
SMC5-201ENST00000361138 D2HGDHQ8N465 521 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms