RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 PRR20EP86478 221 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 PRR20CP86479 221 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 PRR20DP86480 221 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 PRR20BP86481 221 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 PRR20AP86496 221 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 CDK5Q00535 292 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 TAF13Q15543 124 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 PLCXD3Q63HM9 321 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 BAIAP2L2Q6UXY1 529 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 GTSCR1Q86UQ5 136 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 FBLIM1Q8WUP2 373 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 DCUN1D5Q9BTE7 237 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 IFT27Q9BW83 186 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 MFFQ9GZY8 342 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 Q9H521 79 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 MAGIXQ9H6Y5 334 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 SNX5Q9Y5X3 404 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 TMEM14AQ9Y6G1 99 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 FAM172BPA6NC97 362 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 SOX15O60248 233 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 IFNGP01579 166 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 IGHA1P01876 353 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 AMBPP02760 352 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 PSMB6P28072 239 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 PRDX6P30041 224 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 MAP2K4P45985 399 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 ALDH3B2P48448 385 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 PRKXP51817 358 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 POLR2GP62487 172 aaKnown RBP eCLIP4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 CDK5R1Q15078 307 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 C4orf46Q504U0 113 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 PXDC1Q5TGL8 231 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 FAHD1Q6P587 224 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 TRAT1Q6PIZ9 186 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 MOB3CQ70IA8 216 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 CATSPERDQ86XM0 798 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 OR56B4Q8NH76 319 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 TRUB1Q8WWH5 349 aaKnown RBP4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 HRASLS5Q96KN8 279 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 RASL11BQ9BPW5 248 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 MROQ9BYG7 248 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 DAPK2Q9UIK4 370 aa4.47□□□□□ -1.69
CDC42SE2-201ENST00000360515 HERC1Q15751 4861 aa4.46□□□□□ -1.69
CDC42SE2-201ENST00000360515 CNIH1O95406 144 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 OR2H2O95918 312 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 HSD17B1P14061 328 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 GALP22466 123 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 IL3RAP26951 378 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 NKX2-5P52952 324 aaPredicted RBP4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 SLURP1P55000 103 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 C1orf146Q5VVC0 180 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 AMIGO2Q86SJ2 522 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 OR2T33Q8NG76 320 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 KCTD12Q96CX2 325 aaKnown RBP4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 USMG5Q96IX5 58 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 ATP6V0BQ99437 205 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 SLC29A1Q99808 456 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 RAB9BQ9NP90 201 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 GFOD1Q9NXC2 390 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 PSG11Q9UQ72 335 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 PIGLQ9Y2B2 252 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 MYCBP2O75592 4640 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 C11orf94C9JXX5 98 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 CRYGBP07316 175 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 SLC2A1P11166 492 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 GZMHP20718 246 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 UBE2V2Q15819 145 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 C5orf64Q2M2E5 130 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 UBE2UQ5VVX9 321 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 OTPQ5XKR4 325 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 ODF3L1Q8IXM7 274 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 ZNF488Q96MN9 340 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 OR4C12Q96R67 309 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 EXOSC4Q9NPD3 245 aaKnown RBP4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 GPR84Q9NQS5 396 aa4.46□□□□□ -1.7
CDC42SE2-201ENST00000360515 SH2D7A6NKC9 451 aaPredicted RBP4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 H3BNX3 289 aa4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 ZNF3P17036 446 aa4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 KHDC1LQ5JSQ8 128 aa4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 UTF1Q5T230 341 aa4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 RRM2BQ7LG56 351 aa4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 PYDC1Q8WXC3 89 aa4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 CNBD2Q96M20 576 aa4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 RAB26Q9ULW5 256 aa4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 GAB2Q9UQC2 676 aa4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 TRBV9A0A0B4J1U6 114 aa4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 TVP23AA6NH52 213 aa4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 B2RBV5 119 aa4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 ZNF701M0R085 212 aaPredicted RBP4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 CASQ2O14958 399 aaPredicted RBP4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 S100A6P06703 90 aa4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 SNRPBP14678 240 aaKnown RBP4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 BMI1P35226 326 aa4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 GLP1RP43220 463 aa4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 MRPL28Q13084 256 aaKnown RBP4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 PDZK1IP1Q13113 114 aa4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 GLT8D1Q68CQ7 371 aa4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 STPG3Q8N7X2 389 aa4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 TSPAN14Q8NG11 270 aa4.45□□□□□ -1.7
CDC42SE2-201ENST00000360515 PYURFQ96I23 114 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms