RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 C16orf52Q8NHV5 167 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 PLPPR2Q96GM1 343 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 VCX2Q9H322 139 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 GUCD1Q96NT3 240 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 RCC2Q9P258 522 aaKnown RBP11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 VEGFBP49765 207 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 PDCD1Q15116 288 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 MS4A5Q9H3V2 200 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 PATJQ8NI35 1801 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 MGPP08493 103 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 SPANXN1Q5VSR9 72 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 CADM4Q8NFZ8 388 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 SAP30LQ9HAJ7 183 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 OR4C45A6NMZ5 311 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 DEFB108AA8MXU0 73 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 CHST1O43916 411 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 DEFB103AP81534 67 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 PEF1Q9UBV8 284 aaKnown RBP11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 SIGLEC5O15389 551 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 CA11O75493 328 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 SIGLEC14Q08ET2 396 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 TSPO2Q5TGU0 170 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 A0A1W2PR80 420 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 TIMP4Q99727 224 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 OPN3Q9H1Y3 402 aaPredicted RBP11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 FOXB1Q99853 325 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 SPAG8Q99932 426 aaPredicted RBP11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 TBX21Q9UL17 535 aa11.68□□□□□ -0.54
SRGAP3-201ENST00000360413 IGHV3-20A0A0C4DH32 117 aa11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 TMEM210A6NLX4 147 aa11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 PPP1R17O96001 155 aa11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 METTL26Q96S19 204 aa11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 C11orf68Q9H3H3 251 aaKnown RBP11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 ZNF107Q9UII5 783 aaPredicted RBP11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 PSG11Q9UQ72 335 aa11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 A0A087WUJ7 227 aa11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 CFDP00746 253 aaPredicted RBP11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 CEACAM16Q2WEN9 425 aa11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 DPH3Q96FX2 82 aa11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 OR10J6PQ8NGY7 276 aa11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 NT5CQ8TCD5 201 aa11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 IL19Q9UHD0 177 aa11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 ASB1Q9Y576 335 aa11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 F11RQ9Y624 299 aaKnown RBP11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 FAM181BA6NEQ2 426 aa11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 CCL17Q92583 94 aa11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 CNTD2Q9H8S5 307 aa11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 ALKBH6Q3KRA9 238 aa11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 CDX2Q99626 313 aaPredicted RBP11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 RGPD3A6NKT7 1758 aaPredicted RBP11.67□□□□□ -0.54
SRGAP3-201ENST00000360413 CDS2O95674 445 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 CD74P04233 296 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 RPS4XP62701 263 aaKnown RBP11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 TWIST1Q15672 202 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 SPATA46Q5T0L3 261 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 ZNF519Q8TB69 540 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 MRPL30Q8TCC3 161 aaKnown RBP11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 RAXQ9Y2V3 346 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 CASP8AP2Q9UKL3 1982 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 FXYD1O00168 92 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 GZMHP20718 246 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 TSPOP30536 169 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 CTAG1AP78358 180 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 LINC00615Q96LM1 132 aaPredicted RBP11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 ALG1L2C9J202 215 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 CXCL13O43927 109 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 HOXD4P09016 255 aaPredicted RBP11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 SBK3P0C264 359 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 FAM53AQ6NSI3 398 aaPredicted RBP11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 SLC25A17O43808 307 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 DLK2Q6UY11 383 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 TBC1D29Q9UFV1 150 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 INSIG2Q9Y5U4 225 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 RCC1P18754 421 aaPredicted RBP11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 NIT1Q86X76 327 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 MFRPQ9BY79 579 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 MMP16P51512 607 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 ZNF83P51522 516 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 MFAP2P55001 183 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 SSMEM1Q8WWF3 244 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 NRIP2Q9BQI9 281 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 TRDCB7Z8K6 153 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 FGF17O60258 216 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 GALNT14Q96FL9 552 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 TXNDC17Q9BRA2 123 aa11.66□□□□□ -0.54
SRGAP3-201ENST00000360413 UPK1AO00322 258 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 PDCD6O75340 191 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 ZNF324O75467 553 aaPredicted RBP11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 SMIM13P0DJ93 91 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 ARF6P62330 175 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 GAB4Q2WGN9 574 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 RHBDD2Q6NTF9 364 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 CA13Q8N1Q1 262 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 ALKBH3Q96Q83 286 aaPredicted RBP11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 ALKBH7Q9BT30 221 aaPredicted RBP11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 KCNK7Q9Y2U2 307 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 KCNAB3O43448 404 aa11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 OTX1P32242 354 aaPredicted RBP11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 RPS20P60866 119 aaKnown RBP11.65□□□□□ -0.54
SRGAP3-201ENST00000360413 GSN-AS1Q9NRJ2 163 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms