RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 HOXD4P09016 255 aaPredicted RBP12.59□□□□□ -0.39
GABPB1-202ENST00000359031 GLI4P10075 376 aa12.59□□□□□ -0.39
GABPB1-202ENST00000359031 HMGN3Q15651 99 aa12.59□□□□□ -0.39
GABPB1-202ENST00000359031 TIMM23BQ5SRD1 257 aa12.59□□□□□ -0.39
GABPB1-202ENST00000359031 C1QTNF12Q5T7M4 302 aa12.59□□□□□ -0.39
GABPB1-202ENST00000359031 GPR157Q5UAW9 335 aa12.59□□□□□ -0.39
GABPB1-202ENST00000359031 UQCC3Q6UW78 93 aa12.59□□□□□ -0.39
GABPB1-202ENST00000359031 C11orf53Q8IXP5 236 aa12.59□□□□□ -0.39
GABPB1-202ENST00000359031 OR52M1Q8NGK5 317 aa12.59□□□□□ -0.39
GABPB1-202ENST00000359031 TMED6Q8WW62 240 aa12.59□□□□□ -0.39
GABPB1-202ENST00000359031 SFXN3Q9BWM7 321 aa12.59□□□□□ -0.39
GABPB1-202ENST00000359031 NARFLQ9H6Q4 476 aa12.59□□□□□ -0.39
GABPB1-202ENST00000359031 ASF1BQ9NVP2 202 aa12.59□□□□□ -0.39
GABPB1-202ENST00000359031 TRAPPC2LQ9UL33 140 aa12.59□□□□□ -0.39
GABPB1-202ENST00000359031 TMEM30CPA0ZSE6 113 aa12.58□□□□□ -0.4
GABPB1-202ENST00000359031 RAB19A4D1S5 217 aa12.58□□□□□ -0.4
GABPB1-202ENST00000359031 CLEC18AA5D8T8 446 aa12.58□□□□□ -0.4
GABPB1-202ENST00000359031 TEX46H3BTG2 121 aa12.58□□□□□ -0.4
GABPB1-202ENST00000359031 LMO1P25800 156 aa12.58□□□□□ -0.4
GABPB1-202ENST00000359031 RPL7L1Q6DKI1 246 aaKnown RBP12.58□□□□□ -0.4
GABPB1-202ENST00000359031 FAM180AQ6UWF9 173 aa12.58□□□□□ -0.4
GABPB1-202ENST00000359031 Q6ZR03 302 aa12.58□□□□□ -0.4
GABPB1-202ENST00000359031 CLEC18CQ8NCF0 446 aa12.58□□□□□ -0.4
GABPB1-202ENST00000359031 OR10V1Q8NGI7 309 aa12.58□□□□□ -0.4
GABPB1-202ENST00000359031 PRR7Q8TB68 274 aa12.58□□□□□ -0.4
GABPB1-202ENST00000359031 FAM57AQ8TBR7 257 aa12.58□□□□□ -0.4
GABPB1-202ENST00000359031 TAF9BQ9HBM6 251 aa12.58□□□□□ -0.4
GABPB1-202ENST00000359031 OR2S2Q9NQN1 319 aa12.58□□□□□ -0.4
GABPB1-202ENST00000359031 TAS2R3Q9NYW6 316 aa12.58□□□□□ -0.4
GABPB1-202ENST00000359031 RCL1Q9Y2P8 373 aaKnown RBP12.58□□□□□ -0.4
GABPB1-202ENST00000359031 NKX2-6A6NCS4 301 aa12.57□□□□□ -0.4
GABPB1-202ENST00000359031 A6NLC8 198 aa12.57□□□□□ -0.4
GABPB1-202ENST00000359031 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.57□□□□□ -0.4
GABPB1-202ENST00000359031 PGLYRP1O75594 196 aaPredicted RBP12.57□□□□□ -0.4
GABPB1-202ENST00000359031 M6PRP20645 277 aa12.57□□□□□ -0.4
GABPB1-202ENST00000359031 TMEM33P57088 247 aa12.57□□□□□ -0.4
GABPB1-202ENST00000359031 GALNT11Q8NCW6 608 aa12.57□□□□□ -0.4
GABPB1-202ENST00000359031 LILRB1Q8NHL6 650 aaPredicted RBP12.57□□□□□ -0.4
GABPB1-202ENST00000359031 SAT2Q96F10 170 aaPredicted RBP12.57□□□□□ -0.4
GABPB1-202ENST00000359031 AKR1E2Q96JD6 320 aa12.57□□□□□ -0.4
GABPB1-202ENST00000359031 VDAC1P21796 283 aa12.56□□□□□ -0.4
GABPB1-202ENST00000359031 F2RP25116 425 aa12.56□□□□□ -0.4
GABPB1-202ENST00000359031 CEACAM8P31997 349 aaPredicted RBP12.56□□□□□ -0.4
GABPB1-202ENST00000359031 FABP6P51161 128 aa12.56□□□□□ -0.4
GABPB1-202ENST00000359031 GNMTQ14749 295 aa12.56□□□□□ -0.4
GABPB1-202ENST00000359031 SMIM21Q3B7S5 101 aa12.56□□□□□ -0.4
GABPB1-202ENST00000359031 NMSQ5H8A3 153 aa12.56□□□□□ -0.4
GABPB1-202ENST00000359031 SLC35E4Q6ICL7 350 aa12.56□□□□□ -0.4
GABPB1-202ENST00000359031 ZNF474Q6S9Z5 364 aaPredicted RBP12.56□□□□□ -0.4
GABPB1-202ENST00000359031 WDR82Q6UXN9 313 aa12.56□□□□□ -0.4
GABPB1-202ENST00000359031 ACP7Q6ZNF0 438 aa12.56□□□□□ -0.4
GABPB1-202ENST00000359031 STPG2Q8N412 459 aa12.56□□□□□ -0.4
GABPB1-202ENST00000359031 UBAC2Q8NBM4 344 aa12.56□□□□□ -0.4
GABPB1-202ENST00000359031 OR1S2Q8NGQ3 325 aa12.56□□□□□ -0.4
GABPB1-202ENST00000359031 IL1F10Q8WWZ1 152 aa12.56□□□□□ -0.4
GABPB1-202ENST00000359031 ARL11Q969Q4 196 aa12.56□□□□□ -0.4
GABPB1-202ENST00000359031 MARC2Q969Z3 335 aa12.56□□□□□ -0.4
GABPB1-202ENST00000359031 OR1A1Q9P1Q5 309 aa12.56□□□□□ -0.4
GABPB1-202ENST00000359031 LPAR3Q9UBY5 353 aa12.56□□□□□ -0.4
GABPB1-202ENST00000359031 OR14J1Q9UGF5 321 aa12.56□□□□□ -0.4
GABPB1-202ENST00000359031 ERRFI1Q9UJM3 462 aaPredicted RBP12.56□□□□□ -0.4
GABPB1-202ENST00000359031 INTS1Q8N201 2190 aaKnown RBP12.56□□□□□ -0.4
GABPB1-202ENST00000359031 BORCS7-ASMTA0A0B4J1R7 106 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 K7EM74 188 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 LGALS8O00214 317 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 FAM157CP0CG43 387 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 PVALBP20472 110 aaPredicted RBP12.55□□□□□ -0.4
GABPB1-202ENST00000359031 NKX2-1P43699 371 aaPredicted RBP12.55□□□□□ -0.4
GABPB1-202ENST00000359031 TESK1Q15569 626 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 PRAMEF6Q5VXH4 476 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 DMBX1Q8NFW5 382 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 S100PBPQ96BU1 408 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 C11orf1Q9H5F2 150 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 KCNIP1Q9NZI2 227 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 FZR1Q9UM11 496 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 SPEF1Q9Y4P9 236 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 MYO18BQ8IUG5 2567 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 IGHV3-64DA0A0J9YX35 117 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 K7ENP7 123 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 IFNL4K9M1U5 179 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 HSPA12AO43301 675 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 ADAM20O43506 726 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 MMP9P14780 707 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 CD200P41217 278 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 ZNF83P51522 516 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 GTF3C1Q12789 2109 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 ZNF826PQ6ZT77 177 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 RPRMLQ8N4K4 120 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 SUN5Q8TC36 379 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 ARV1Q9H2C2 271 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 MSL2Q9HCI7 577 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 MMP26Q9NRE1 261 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 ZDHHC8Q9ULC8 765 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 SSUH2Q9Y2M2 353 aa12.55□□□□□ -0.4
GABPB1-202ENST00000359031 ZNF705EA8MWA4 302 aaPredicted RBP12.54□□□□□ -0.4
GABPB1-202ENST00000359031 M0R1B8 84 aa12.54□□□□□ -0.4
GABPB1-202ENST00000359031 WNT9BO14905 357 aa12.54□□□□□ -0.4
GABPB1-202ENST00000359031 TNFSF12O43508 249 aa12.54□□□□□ -0.4
GABPB1-202ENST00000359031 PSPNO60542 156 aa12.54□□□□□ -0.4
GABPB1-202ENST00000359031 PTBP3O95758 552 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms