RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 ANKRD30BLA7E2S9 258 aa13.66□□□□□ -0.22
PTPN5-201ENST00000358540 TSTD3H0UI37 97 aa13.66□□□□□ -0.22
PTPN5-201ENST00000358540 SS18L1O75177 396 aaPredicted RBP13.66□□□□□ -0.22
PTPN5-201ENST00000358540 SCGB1D2O95969 90 aa13.66□□□□□ -0.22
PTPN5-201ENST00000358540 SELEP16581 610 aa13.66□□□□□ -0.22
PTPN5-201ENST00000358540 AADACP22760 399 aa13.66□□□□□ -0.22
PTPN5-201ENST00000358540 CD82P27701 267 aa13.66□□□□□ -0.22
PTPN5-201ENST00000358540 CAMLGP49069 296 aa13.66□□□□□ -0.22
PTPN5-201ENST00000358540 TMEM33P57088 247 aa13.66□□□□□ -0.22
PTPN5-201ENST00000358540 HS3ST1O14792 307 aa13.65□□□□□ -0.22
PTPN5-201ENST00000358540 JTBO76095 146 aa13.65□□□□□ -0.22
PTPN5-201ENST00000358540 ALKBH6Q3KRA9 238 aa13.65□□□□□ -0.22
PTPN5-201ENST00000358540 ZNF343Q6P1L6 599 aa13.65□□□□□ -0.22
PTPN5-201ENST00000358540 POC1AQ8NBT0 407 aa13.65□□□□□ -0.22
PTPN5-201ENST00000358540 RTN4IP1Q8WWV3 396 aaPredicted RBP13.65□□□□□ -0.22
PTPN5-201ENST00000358540 RDH5Q92781 318 aa13.65□□□□□ -0.22
PTPN5-201ENST00000358540 FAM212BQ9NTI7 297 aaPredicted RBP13.65□□□□□ -0.22
PTPN5-201ENST00000358540 ESPL1Q14674 2120 aa13.65□□□□□ -0.22
PTPN5-201ENST00000358540 CRYM-AS1A6NIL9 109 aa13.65□□□□□ -0.22
PTPN5-201ENST00000358540 VWA1Q6PCB0 445 aa13.65□□□□□ -0.22
PTPN5-201ENST00000358540 TGIF2LXQ8IUE1 241 aa13.65□□□□□ -0.22
PTPN5-201ENST00000358540 OR2J1Q9GZK6 312 aa13.65□□□□□ -0.22
PTPN5-201ENST00000358540 SLC35B3Q9H1N7 401 aa13.65□□□□□ -0.22
PTPN5-201ENST00000358540 AGFG2O95081 481 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 SCTP09683 121 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 SPCS3P61009 180 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 FGF12P61328 243 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 KDF1Q8NAX2 398 aaPredicted RBP13.64□□□□□ -0.23
PTPN5-201ENST00000358540 NANOS1Q8WY41 292 aaKnown RBP13.64□□□□□ -0.23
PTPN5-201ENST00000358540 OR5P3Q8WZ94 311 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 GMPPAQ96IJ6 420 aaPredicted RBP13.64□□□□□ -0.23
PTPN5-201ENST00000358540 C1orf123Q9NWV4 160 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 MUC6Q6W4X9 2439 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 AKAP13Q12802 2813 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 PPP1R2P9O14990 202 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 TCAPO15273 167 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 SOD3P08294 240 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 FABP4P15090 132 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 UBE2NP61088 152 aaKnown RBP13.64□□□□□ -0.23
PTPN5-201ENST00000358540 PKIAP61925 76 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 GGNBP1Q5YKI7 109 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 MKXQ8IYA7 352 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 ZNF610Q8N9Z0 462 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 LYPD6BQ8NI32 183 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 SCRT1Q9BWW7 348 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 SLC2A9Q9NRM0 540 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 LSM5Q9Y4Y9 91 aaKnown RBP13.64□□□□□ -0.23
PTPN5-201ENST00000358540 HOXA4Q00056 320 aaPredicted RBP13.64□□□□□ -0.23
PTPN5-201ENST00000358540 SOHLH1Q5JUK2 328 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 CLCF1Q9UBD9 225 aa13.64□□□□□ -0.23
PTPN5-201ENST00000358540 TRAV39A0A0B4J263 110 aa13.63□□□□□ -0.23
PTPN5-201ENST00000358540 SEC14L6B5MCN3 397 aa13.63□□□□□ -0.23
PTPN5-201ENST00000358540 KHDC3LQ587J8 217 aa13.63□□□□□ -0.23
PTPN5-201ENST00000358540 ALKBH2Q6NS38 261 aa13.63□□□□□ -0.23
PTPN5-201ENST00000358540 C9orf106Q8NAJ2 232 aa13.63□□□□□ -0.23
PTPN5-201ENST00000358540 LUZP4Q9P127 313 aa13.63□□□□□ -0.23
PTPN5-201ENST00000358540 HERV-K104P61576 105 aa13.63□□□□□ -0.23
PTPN5-201ENST00000358540 TCF15Q12870 199 aa13.63□□□□□ -0.23
PTPN5-201ENST00000358540 FOXF2Q12947 444 aa13.63□□□□□ -0.23
PTPN5-201ENST00000358540 TBC1D28Q2M2D7 210 aa13.63□□□□□ -0.23
PTPN5-201ENST00000358540 OR5A2Q8NGI9 324 aa13.63□□□□□ -0.23
PTPN5-201ENST00000358540 TMEM211Q6ICI0 200 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 MEX3BQ6ZN04 569 aaKnown RBP13.62□□□□□ -0.23
PTPN5-201ENST00000358540 LYZL2Q7Z4W2 148 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 ERGIC1Q969X5 290 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 NAA60Q9H7X0 242 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 WASF3Q9UPY6 502 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 HIST1H2BKO60814 126 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 HIST1H2BJP06899 126 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 HIST1H2BOP23527 126 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 HIST1H2BBP33778 126 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 HIST1H2BDP58876 126 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 HIST1H2BCP62807 126 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 HIST2H2BEQ16778 126 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.62□□□□□ -0.23
PTPN5-201ENST00000358540 UBALD1Q8TB05 177 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 HIST1H2BHQ93079 126 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 POM121Q96HA1 1249 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 HIST1H2BNQ99877 126 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 HIST1H2BMQ99879 126 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 RARRES2Q99969 163 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 CDH20Q9HBT6 801 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 MEMO1Q9Y316 297 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 DIRAS3O95661 229 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 PPYP01298 95 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 CXCL1P09341 107 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 NKX6-1P78426 367 aaPredicted RBP13.62□□□□□ -0.23
PTPN5-201ENST00000358540 C20orf204Q6ZNR8 217 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 FAM214BQ7L5A3 538 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 SUMF2Q8NBJ7 301 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 MUCL1Q96DR8 90 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 BSCL2Q96G97 398 aaPredicted RBP13.62□□□□□ -0.23
PTPN5-201ENST00000358540 DECR2Q9NUI1 292 aa13.62□□□□□ -0.23
PTPN5-201ENST00000358540 TRAV17A0A0B4J275 112 aa13.61□□□□□ -0.23
PTPN5-201ENST00000358540 PHF1O43189 567 aaPredicted RBP13.61□□□□□ -0.23
PTPN5-201ENST00000358540 ECI1P42126 302 aa13.61□□□□□ -0.23
PTPN5-201ENST00000358540 PPP1CBP62140 327 aa13.61□□□□□ -0.23
PTPN5-201ENST00000358540 SPIN3Q5JUX0 258 aa13.61□□□□□ -0.23
PTPN5-201ENST00000358540 WDR86Q86TI4 376 aa13.61□□□□□ -0.23
PTPN5-201ENST00000358540 TMEM68Q96MH6 324 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms