RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 NXF5Q9H1B4 397 aaKnown RBP3.6□□□□□ -1.83
SYNE2-204ENST00000358025 Q6AWC8 147 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 ZNF761Q86XN6 746 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-204ENST00000358025 GBGT1Q8N5D6 347 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 APH1AQ96BI3 265 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 MRPL27Q9P0M9 148 aaKnown RBP3.6□□□□□ -1.83
SYNE2-204ENST00000358025 NUBP1P53384 320 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 RSPO2Q6UXX9 243 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-204ENST00000358025 PIGCQ92535 297 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 Q96M66 194 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 PEF1Q9UBV8 284 aaKnown RBP3.6□□□□□ -1.83
SYNE2-204ENST00000358025 DLEU1O43261 78 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 PDLIM4P50479 330 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 FGF13Q92913 245 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 TMEM45BQ96B21 275 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 PERPQ96FX8 193 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 PRDM14Q9GZV8 571 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 TMEM106BQ9NUM4 274 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-204ENST00000358025 ADIPOR1Q96A54 375 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 HIST1H2BKO60814 126 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 HIST1H2BJP06899 126 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 CCNOP22674 350 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 HIST1H2BOP23527 126 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 HIST1H2BBP33778 126 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 HIST1H2BDP58876 126 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 HIST1H2BCP62807 126 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 RNPS1Q15287 305 aaKnown RBP3.6□□□□□ -1.83
SYNE2-204ENST00000358025 HIST2H2BEQ16778 126 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 LRRC75BQ2VPJ9 315 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-204ENST00000358025 TGIF2LXQ8IUE1 241 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 GVQW1Q8N7I0 195 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 HIST1H2BHQ93079 126 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 HIST1H2BNQ99877 126 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 HIST1H2BMQ99879 126 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 FAAP24Q9BTP7 215 aa3.6□□□□□ -1.83
SYNE2-204ENST00000358025 IGLV1-36A0A0B4J1U3 117 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 C19orf67A6NJJ6 358 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 GYPAP02724 150 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 DPRXA6NFQ7 191 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 GNG4P50150 75 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 ABHD17BQ5VST6 288 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-204ENST00000358025 VSTM2AQ8TAG5 236 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 C18orf12Q96KH6 178 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 COMMD5Q9GZQ3 224 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 IGSF23A1L1A6 192 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 GPR37O15354 613 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 SMPD2O60906 423 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 MRPL33O75394 65 aaKnown RBP3.59□□□□□ -1.83
SYNE2-204ENST00000358025 BGLAPP02818 100 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 FAM78AQ5JUQ0 283 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 NCMAPQ5T1S8 102 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 ZNF468Q5VIY5 522 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-204ENST00000358025 NOXO1Q8NFA2 376 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 WDYHV1Q96HA8 205 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 LINC01553A4QN01 128 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 MST1P26927 711 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 BPIFB3P59826 476 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 ZDHHC23Q8IYP9 409 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 KLK13Q9UKR3 277 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 EDN3P14138 238 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 IL9P15248 144 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 PSMB5P28074 263 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 CTGFP29279 349 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 KRTDAPP60985 99 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 SELENOTP62341 195 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 LMX1AQ8TE12 382 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 OBP2BQ9NPH6 170 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 LYPD3O95274 346 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 TMEM50BP56557 158 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 TRA2AQ13595 282 aaKnown RBP eCLIP3.59□□□□□ -1.83
SYNE2-204ENST00000358025 VWA1Q6PCB0 445 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 HIST1H2BLQ99880 126 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 ZNF230Q9UIE0 474 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-204ENST00000358025 ANAPC1Q9H1A4 1944 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 PGLYRP1O75594 196 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-204ENST00000358025 CEBPBP17676 345 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 PCNPQ8WW12 178 aaKnown RBP3.59□□□□□ -1.83
SYNE2-204ENST00000358025 WFDC1Q9HC57 220 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 PILRAQ9UKJ1 303 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 MGAMO43451 1857 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 HELTA6NFD8 242 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 GREM1O60565 184 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 LIPCP11150 499 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 WFDC5Q8TCV5 224 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 MENTQ9BUN1 341 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 CA13Q8N1Q1 262 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 PCNX1Q96RV3 2341 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 A0A0A6YYC8 382 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-204ENST00000358025 I3L1I5 382 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-204ENST00000358025 AMBPP02760 352 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 FAAP20Q6NZ36 180 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 CPEB2Q7Z5Q1 589 aaKnown RBP3.59□□□□□ -1.83
SYNE2-204ENST00000358025 CPEB3Q8NE35 698 aaKnown RBP3.59□□□□□ -1.83
SYNE2-204ENST00000358025 OR52E5Q8NH55 327 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 ZSWIM8A7E2V4 1837 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 TMEM238LA0A1B0GVL6 79 aa3.59□□□□□ -1.83
SYNE2-204ENST00000358025 A6NJY4 79 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms