RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ST6GALNAC5Q9BVH7 336 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 METTL8Q9H825 291 aaKnown RBP12.19□□□□□ -0.46
CCNE1-202ENST00000357943 YAE1D1Q9NRH1 226 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 IGKV1D-8A0A087WSZ0 117 aa12.18□□□□□ -0.46
CCNE1-202ENST00000357943 J3QLI3 93 aa12.18□□□□□ -0.46
CCNE1-202ENST00000357943 ORC5O43913 435 aa12.18□□□□□ -0.46
CCNE1-202ENST00000357943 HBZP02008 142 aa12.18□□□□□ -0.46
CCNE1-202ENST00000357943 IGHV1-8P0DP01 117 aa12.18□□□□□ -0.46
CCNE1-202ENST00000357943 HMGN3Q15651 99 aa12.18□□□□□ -0.46
CCNE1-202ENST00000357943 ZNF79Q15937 498 aa12.18□□□□□ -0.46
CCNE1-202ENST00000357943 RNASE12Q5GAN4 147 aaKnown RBP12.18□□□□□ -0.46
CCNE1-202ENST00000357943 PYHIN1Q6K0P9 492 aa12.18□□□□□ -0.46
CCNE1-202ENST00000357943 FAM131AQ6UXB0 335 aa12.18□□□□□ -0.46
CCNE1-202ENST00000357943 HEPN1Q6WQI6 88 aa12.18□□□□□ -0.46
CCNE1-202ENST00000357943 C1orf122Q6ZSJ8 110 aa12.18□□□□□ -0.46
CCNE1-202ENST00000357943 MOB1BQ7L9L4 216 aa12.18□□□□□ -0.46
CCNE1-202ENST00000357943 OR1L1Q8NH94 360 aa12.18□□□□□ -0.46
CCNE1-202ENST00000357943 TNFRSF14Q92956 283 aa12.18□□□□□ -0.46
CCNE1-202ENST00000357943 KIRREL1Q96J84 757 aa12.18□□□□□ -0.46
CCNE1-202ENST00000357943 LINC00574Q9H8X3 128 aa12.18□□□□□ -0.46
CCNE1-202ENST00000357943 KCNIP1Q9NZI2 227 aa12.18□□□□□ -0.46
CCNE1-202ENST00000357943 A8MV72 311 aaPredicted RBP12.17□□□□□ -0.46
CCNE1-202ENST00000357943 TPPPO94811 219 aa12.17□□□□□ -0.46
CCNE1-202ENST00000357943 SCTP09683 121 aa12.17□□□□□ -0.46
CCNE1-202ENST00000357943 PRTN3P24158 256 aa12.17□□□□□ -0.46
CCNE1-202ENST00000357943 PTBP1P26599 531 aaKnown RBP eCLIP12.17□□□□□ -0.46
CCNE1-202ENST00000357943 IFITM3Q01628 133 aa12.17□□□□□ -0.46
CCNE1-202ENST00000357943 UTF1Q5T230 341 aa12.17□□□□□ -0.46
CCNE1-202ENST00000357943 FAM53AQ6NSI3 398 aaPredicted RBP12.17□□□□□ -0.46
CCNE1-202ENST00000357943 TRAT1Q6PIZ9 186 aa12.17□□□□□ -0.46
CCNE1-202ENST00000357943 Q71RC1 249 aaPredicted RBP12.17□□□□□ -0.46
CCNE1-202ENST00000357943 GPX8Q8TED1 209 aa12.17□□□□□ -0.46
CCNE1-202ENST00000357943 OCSTAMPQ9BR26 566 aa12.17□□□□□ -0.46
CCNE1-202ENST00000357943 SRRQ9GZT4 340 aa12.17□□□□□ -0.46
CCNE1-202ENST00000357943 hCG_1809904A0A1W2PP81 198 aa12.16□□□□□ -0.46
CCNE1-202ENST00000357943 A0A1W2PPE2 198 aa12.16□□□□□ -0.46
CCNE1-202ENST00000357943 A0A1W2PR64 198 aa12.16□□□□□ -0.46
CCNE1-202ENST00000357943 A0A1W2PRV1 198 aa12.16□□□□□ -0.46
CCNE1-202ENST00000357943 FAM172BPA6NC97 362 aa12.16□□□□□ -0.46
CCNE1-202ENST00000357943 POM121CA8CG34 1229 aa12.16□□□□□ -0.46
CCNE1-202ENST00000357943 RBP4P02753 201 aa12.16□□□□□ -0.46
CCNE1-202ENST00000357943 LPLP06858 475 aa12.16□□□□□ -0.46
CCNE1-202ENST00000357943 HLA-DRB3P79483 266 aa12.16□□□□□ -0.46
CCNE1-202ENST00000357943 KLRD1Q13241 179 aa12.16□□□□□ -0.46
CCNE1-202ENST00000357943 ZNF554Q86TJ5 538 aa12.16□□□□□ -0.46
CCNE1-202ENST00000357943 PDZD9Q8IXQ8 264 aa12.16□□□□□ -0.46
CCNE1-202ENST00000357943 OR52I2Q8NH67 350 aa12.16□□□□□ -0.46
CCNE1-202ENST00000357943 UPRTQ96BW1 309 aa12.16□□□□□ -0.46
CCNE1-202ENST00000357943 CCDC32Q9BV29 185 aa12.16□□□□□ -0.46
CCNE1-202ENST00000357943 UNKLQ9H9P5 680 aaKnown RBP12.16□□□□□ -0.46
CCNE1-202ENST00000357943 IDI2-AS1Q9NZ38 188 aa12.16□□□□□ -0.46
CCNE1-202ENST00000357943 IGHV3-43A0A0B4J1X8 118 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 TRDCB7Z8K6 153 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 F2RL2O00254 374 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 SPINT2O43291 252 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 PFDN1O60925 122 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 UPK1BO75841 260 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 GSTT2P0CG29 244 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 GSTT2BP0CG30 244 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 IGHV3-43DP0DP04 118 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 FPR2P25090 351 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 NFYBP25208 207 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 DGCR2P98153 550 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 SRSF7Q16629 238 aaKnown RBP eCLIP12.15□□□□□ -0.46
CCNE1-202ENST00000357943 Q6ZS49 121 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 HOGA1Q86XE5 327 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 C15orf40Q8WUR7 153 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 IL1F10Q8WWZ1 152 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 SNAPC3Q92966 411 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 LHX4Q969G2 390 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 GALMQ96C23 342 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 SCPEP1Q9HB40 452 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 KLK11Q9UBX7 282 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 MGAT4AQ9UM21 535 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 SESN1Q9Y6P5 492 aa12.15□□□□□ -0.46
CCNE1-202ENST00000357943 IGHV3OR16-10A0A075B7F0 116 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 TRAV40A0A0B4J280 105 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 IGKV1-6A0A0C4DH72 117 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 RNASEK-C17orf49H0YIS7 233 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 SULT1C2O00338 296 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 CTDSPLO15194 276 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 FABP7O15540 132 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 IGHV3-7P01780 117 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 HOXB4P17483 251 aaPredicted RBP12.15□□□□□ -0.47
CCNE1-202ENST00000357943 KIR2DS4P43632 304 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 CBX5P45973 191 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 LOXL3P58215 753 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 KIR2DS1Q14954 304 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 HERPUD1Q15011 391 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 IGSF11Q5DX21 431 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 KLF17Q5JT82 389 aaPredicted RBP12.15□□□□□ -0.47
CCNE1-202ENST00000357943 OR52W1Q6IF63 320 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 HCP5Q6MZN7 132 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 IL17RELQ6ZVW7 336 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 GDPD1Q8N9F7 314 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 BEST4Q8NFU0 473 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 LEAP2Q969E1 77 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 SUCNR1Q9BXA5 334 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 TMEM133Q9H2Q1 129 aa12.15□□□□□ -0.47
CCNE1-202ENST00000357943 ZNF286AQ9HBT8 521 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms