RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 ICAM4Q14773 271 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 IZUMO4Q1ZYL8 232 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 TEX38Q6PEX7 206 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 FAM58AQ8N1B3 248 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 FBXL14Q8N1E6 418 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 PP6455Q8WZ26 134 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 NEU1Q99519 415 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 PRRG4Q9BZD6 226 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 ZNF319Q9P2F9 582 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 NAT8Q9UHE5 227 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 PPIAL4AQ9Y536 164 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 SPTA1P02549 2419 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 TRIOO75962 3097 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 C3orf85A0A1B0GTC6 90 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 A0A1W2PPV4 95 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 DHHO43323 396 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 MPZP25189 248 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 RPL19P84098 196 aaKnown RBP8.66□□□□□ -1.02
RNF40-202ENST00000357890 OR5AS1Q8N127 324 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 SPACA9Q96E40 222 aaPredicted RBP8.66□□□□□ -1.02
RNF40-202ENST00000357890 CACNA1EQ15878 2313 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 KIAA1324LA8MWY0 1029 aaPredicted RBP8.65□□□□□ -1.02
RNF40-202ENST00000357890 CRYAAP02489 173 aa8.65□□□□□ -1.02
RNF40-202ENST00000357890 MGST1P10620 155 aaKnown RBP8.65□□□□□ -1.02
RNF40-202ENST00000357890 EGR1P18146 543 aa8.65□□□□□ -1.02
RNF40-202ENST00000357890 SHBQ15464 509 aa8.65□□□□□ -1.02
RNF40-202ENST00000357890 KIAA2026Q5HYC2 2103 aa8.65□□□□□ -1.02
RNF40-202ENST00000357890 ZNF468Q5VIY5 522 aaPredicted RBP8.65□□□□□ -1.02
RNF40-202ENST00000357890 SLC25A45Q8N413 288 aa8.65□□□□□ -1.02
RNF40-202ENST00000357890 OR10S1Q8NGN2 331 aa8.65□□□□□ -1.02
RNF40-202ENST00000357890 OR6X1Q8NH79 312 aa8.65□□□□□ -1.02
RNF40-202ENST00000357890 POC1BQ8TC44 478 aa8.65□□□□□ -1.02
RNF40-202ENST00000357890 DIRC2Q96SL1 478 aa8.65□□□□□ -1.02
RNF40-202ENST00000357890 GCM1Q9NP62 436 aa8.65□□□□□ -1.02
RNF40-202ENST00000357890 PPP1R14DQ9NXH3 145 aa8.65□□□□□ -1.02
RNF40-202ENST00000357890 ST3GAL6Q9Y274 331 aa8.65□□□□□ -1.02
RNF40-202ENST00000357890 SHANK1Q9Y566 2161 aa8.65□□□□□ -1.02
RNF40-202ENST00000357890 IGSF23A1L1A6 192 aa8.65□□□□□ -1.02
RNF40-202ENST00000357890 ATOH7Q8N100 152 aa8.65□□□□□ -1.02
RNF40-202ENST00000357890 ALKBH3Q96Q83 286 aaPredicted RBP8.65□□□□□ -1.02
RNF40-202ENST00000357890 CHD9Q3L8U1 2897 aa8.65□□□□□ -1.03
RNF40-202ENST00000357890 A0A0A6YYD4 124 aa8.65□□□□□ -1.03
RNF40-202ENST00000357890 CD55P08174 381 aa8.65□□□□□ -1.03
RNF40-202ENST00000357890 THBS4P35443 961 aa8.65□□□□□ -1.03
RNF40-202ENST00000357890 TDGF1P3P51864 188 aa8.65□□□□□ -1.03
RNF40-202ENST00000357890 SRPXP78539 464 aa8.65□□□□□ -1.03
RNF40-202ENST00000357890 CFHR1Q03591 330 aa8.65□□□□□ -1.03
RNF40-202ENST00000357890 PLPPR5Q32ZL2 321 aa8.65□□□□□ -1.03
RNF40-202ENST00000357890 LEMD1Q68G75 181 aa8.65□□□□□ -1.03
RNF40-202ENST00000357890 VHLLQ6RSH7 139 aa8.65□□□□□ -1.03
RNF40-202ENST00000357890 WDR5BQ86VZ2 330 aa8.65□□□□□ -1.03
RNF40-202ENST00000357890 OR1K1Q8NGR3 316 aa8.65□□□□□ -1.03
RNF40-202ENST00000357890 BORCS7Q96B45 105 aa8.65□□□□□ -1.03
RNF40-202ENST00000357890 OR2J1Q9GZK6 312 aa8.65□□□□□ -1.03
RNF40-202ENST00000357890 IGKV1D-8A0A087WSZ0 117 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 A0A1B0GUS0 222 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 LRRC3CA6NJW4 275 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 TOX3O15405 576 aaPredicted RBP8.64□□□□□ -1.03
RNF40-202ENST00000357890 B4GALT1P15291 398 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 AMTP48728 403 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 TAS2R30P59541 319 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 SRYQ05066 204 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 SMIM15Q7Z3B0 74 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 SPEM1Q8N4L4 309 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 STARD4Q96DR4 205 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 UCN2Q96RP3 112 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 RBKSQ9H477 322 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 SRD5A3Q9H8P0 318 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 PSENENQ9NZ42 101 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 ZDBF2Q9HCK1 2354 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 K7N7A8 449 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 DTYMKP23919 212 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 MAFAQ8NHW3 353 aaPredicted RBP8.64□□□□□ -1.03
RNF40-202ENST00000357890 ZNF385AQ96PM9 386 aaKnown RBP8.64□□□□□ -1.03
RNF40-202ENST00000357890 SMDT1Q9H4I9 107 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 VAX2Q9UIW0 290 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 WIPF3A6NGB9 483 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 CRYM-AS1A6NIL9 109 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 NRASP01111 189 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 OR5G3P0C626 314 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 CRISP2P16562 243 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 SELEP16581 610 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 RANP62826 216 aaKnown RBP8.64□□□□□ -1.03
RNF40-202ENST00000357890 LYSMD4Q5XG99 296 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 GUSBP11Q6P575 273 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 AAED1Q7RTV5 226 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 YRDCQ86U90 279 aaKnown RBP8.64□□□□□ -1.03
RNF40-202ENST00000357890 CALHM1Q8IU99 346 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 TMEM204Q9BSN7 226 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 MYO7BQ6PIF6 2116 aa8.64□□□□□ -1.03
RNF40-202ENST00000357890 TNFSF11O14788 317 aa8.63□□□□□ -1.03
RNF40-202ENST00000357890 TRAF3IP2O43734 574 aaPredicted RBP8.63□□□□□ -1.03
RNF40-202ENST00000357890 VAMP5O95183 116 aa8.63□□□□□ -1.03
RNF40-202ENST00000357890 ZXDAP98168 799 aa8.63□□□□□ -1.03
RNF40-202ENST00000357890 MRPL30Q8TCC3 161 aaKnown RBP8.63□□□□□ -1.03
RNF40-202ENST00000357890 APH1AQ96BI3 265 aa8.63□□□□□ -1.03
RNF40-202ENST00000357890 RASL10BQ96S79 203 aa8.63□□□□□ -1.03
RNF40-202ENST00000357890 ASCL3Q9NQ33 180 aa8.63□□□□□ -1.03
RNF40-202ENST00000357890 RPRMQ9NS64 109 aa8.63□□□□□ -1.03
RNF40-202ENST00000357890 A0A087WWC5 75 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms