RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 RPS10-NUDT3A0A1W2PQS6 291 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 TMEM14DPA8MWL7 114 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 CTDSPLO15194 276 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 LALBAP00709 142 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 WNT2P09544 360 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 LGI3Q8N145 548 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 OR5AP2Q8NGF4 316 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 THYN1Q9P016 225 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 ZNF319Q9P2F9 582 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 EGR1P18146 543 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 CHATP28329 748 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 TNFSF8P32971 234 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 NPBWR2P48146 333 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 RAB31Q13636 194 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 C16orf82Q7Z2V1 217 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 CASTOR1Q8WTX7 329 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 NRGNQ92686 78 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 WDR13Q9H1Z4 485 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 EML6Q6ZMW3 1958 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 IGHV3OR16-10A0A075B7F0 116 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 SOCS1O15524 211 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 FCGR3AP08637 254 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 SNCAP37840 140 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 GLIPR1P48060 266 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 CYCSP99999 105 aaKnown RBP7.66□□□□□ -1.18
UPF2-202ENST00000357604 FAM209BQ5JX69 171 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 HOGA1Q86XE5 327 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 OR4F5Q8NH21 305 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 Q9N2K0 584 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 ANXA10Q9UJ72 324 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 EXPH5Q8NEV8 1989 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 IGHV1-69DA0A0B4J2H0 117 aa7.65□□□□□ -1.18
UPF2-202ENST00000357604 IGHV1-69P01742 117 aa7.65□□□□□ -1.18
UPF2-202ENST00000357604 FGF2P09038 288 aa7.65□□□□□ -1.18
UPF2-202ENST00000357604 RPL23AP62750 156 aaKnown RBP7.65□□□□□ -1.18
UPF2-202ENST00000357604 FAM71F2Q6NXP2 309 aa7.65□□□□□ -1.18
UPF2-202ENST00000357604 IDO2Q6ZQW0 420 aa7.65□□□□□ -1.18
UPF2-202ENST00000357604 PRSS45Q7RTY3 260 aa7.65□□□□□ -1.18
UPF2-202ENST00000357604 LPAR5Q9H1C0 372 aa7.65□□□□□ -1.18
UPF2-202ENST00000357604 RIF1Q5UIP0 2472 aaKnown RBP7.65□□□□□ -1.18
UPF2-202ENST00000357604 IGLV3-1P01715 115 aa7.65□□□□□ -1.18
UPF2-202ENST00000357604 SURF2Q15527 256 aaPredicted RBP7.65□□□□□ -1.18
UPF2-202ENST00000357604 ZNF497Q6ZNH5 498 aa7.65□□□□□ -1.18
UPF2-202ENST00000357604 OR4X2Q8NGF9 303 aa7.65□□□□□ -1.18
UPF2-202ENST00000357604 GAR1Q9NY12 217 aaKnown RBP7.65□□□□□ -1.18
UPF2-202ENST00000357604 ZNF222Q9UK12 451 aa7.65□□□□□ -1.18
UPF2-202ENST00000357604 RNF24Q9Y225 148 aa7.65□□□□□ -1.18
UPF2-202ENST00000357604 A0A1W2PN81 502 aa7.65□□□□□ -1.18
UPF2-202ENST00000357604 PRTN3P24158 256 aa7.65□□□□□ -1.18
UPF2-202ENST00000357604 CHRNA7P36544 502 aa7.65□□□□□ -1.18
UPF2-202ENST00000357604 RAB2AP61019 212 aa7.65□□□□□ -1.18
UPF2-202ENST00000357604 HTD2P86397 168 aa7.65□□□□□ -1.18
UPF2-202ENST00000357604 CXorf66Q5JRM2 361 aaPredicted RBP7.65□□□□□ -1.18
UPF2-202ENST00000357604 TMEM200BQ69YZ2 307 aa7.65□□□□□ -1.18
UPF2-202ENST00000357604 RPA2P15927 270 aa7.65□□□□□ -1.19
UPF2-202ENST00000357604 MST1LQ2TV78 715 aa7.65□□□□□ -1.19
UPF2-202ENST00000357604 CD177Q8N6Q3 437 aa7.65□□□□□ -1.19
UPF2-202ENST00000357604 PPP1R14BQ96C90 147 aa7.65□□□□□ -1.19
UPF2-202ENST00000357604 BEX1Q9HBH7 125 aa7.65□□□□□ -1.19
UPF2-202ENST00000357604 IGHV1-8P0DP01 117 aa7.65□□□□□ -1.19
UPF2-202ENST00000357604 ASCL4Q6XD76 172 aa7.65□□□□□ -1.19
UPF2-202ENST00000357604 TMEM158Q8WZ71 300 aa7.65□□□□□ -1.19
UPF2-202ENST00000357604 A0A1B0GUS0 222 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 LYRM1O43325 122 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 MOSP00540 346 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 HRH1P35367 487 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 EIF2B2P49770 351 aaKnown RBP7.64□□□□□ -1.19
UPF2-202ENST00000357604 S100A10P60903 97 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 ETFRF1Q6IPR1 90 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 Q6ZSR3 168 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 LAX1Q8IWV1 398 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 ZNF295-AS1Q8N0V1 137 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 OR51H1Q8NH63 302 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 SEH1LQ96EE3 360 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 IGHV4-61A0A0C4DH41 118 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 PRR32B1ATL7 298 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 GSTZ1O43708 216 aaPredicted RBP7.64□□□□□ -1.19
UPF2-202ENST00000357604 CD8AP01732 235 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 MMDQ15546 238 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 FAM120AOSQ5T036 256 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 ASPHD2Q6ICH7 369 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 PDPNQ86YL7 162 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 GNB4Q9HAV0 340 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 TMEM160Q9NX00 188 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 MGAT4CQ9UBM8 478 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 A0A0B4J203 849 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 TMEM82A0PJX8 343 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 KIAA1324LA8MWY0 1029 aaPredicted RBP7.64□□□□□ -1.19
UPF2-202ENST00000357604 E9PQ18 207 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 MT-ND4P03905 459 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 EIF5AP63241 154 aaKnown RBP7.64□□□□□ -1.19
UPF2-202ENST00000357604 FGL1Q08830 312 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 INSL4Q14641 139 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 LY6EQ16553 131 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 HIST2H2BCQ6DN03 193 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 TMEM86BQ8N661 226 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 ZNF709Q8N972 641 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 OR52L2PQ8NGH6 319 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 OR4A5Q8NH83 315 aa7.64□□□□□ -1.19
UPF2-202ENST00000357604 RGP1Q92546 391 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms