RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 BEST4Q8NFU0 473 aa20.81■□□□□ 0.92
SSBP3-202ENST00000357475 TMUB1Q9BVT8 246 aa20.81■□□□□ 0.92
SSBP3-202ENST00000357475 GAL3ST2Q9H3Q3 398 aa20.81■□□□□ 0.92
SSBP3-202ENST00000357475 LINC00574Q9H8X3 128 aa20.81■□□□□ 0.92
SSBP3-202ENST00000357475 KCNIP1Q9NZI2 227 aa20.81■□□□□ 0.92
SSBP3-202ENST00000357475 IGHV3-43A0A0B4J1X8 118 aa20.8■□□□□ 0.92
SSBP3-202ENST00000357475 IGHV3-43DP0DP04 118 aa20.8■□□□□ 0.92
SSBP3-202ENST00000357475 MMP9P14780 707 aa20.8■□□□□ 0.92
SSBP3-202ENST00000357475 MRPS10P82664 201 aaKnown RBP20.8■□□□□ 0.92
SSBP3-202ENST00000357475 IGSF11Q5DX21 431 aa20.8■□□□□ 0.92
SSBP3-202ENST00000357475 Q6ZS49 121 aa20.8■□□□□ 0.92
SSBP3-202ENST00000357475 S100ZQ8WXG8 99 aa20.8■□□□□ 0.92
SSBP3-202ENST00000357475 TRIM63Q969Q1 353 aa20.8■□□□□ 0.92
SSBP3-202ENST00000357475 ZNF286AQ9HBT8 521 aa20.8■□□□□ 0.92
SSBP3-202ENST00000357475 SIRT7Q9NRC8 400 aa20.8■□□□□ 0.92
SSBP3-202ENST00000357475 OPN4Q9UHM6 478 aa20.8■□□□□ 0.92
SSBP3-202ENST00000357475 RBMX2Q9Y388 322 aaKnown RBP20.8■□□□□ 0.92
SSBP3-202ENST00000357475 J3QRK9 145 aa20.79■□□□□ 0.92
SSBP3-202ENST00000357475 FABP7O15540 132 aa20.79■□□□□ 0.92
SSBP3-202ENST00000357475 AVPP01185 164 aa20.79■□□□□ 0.92
SSBP3-202ENST00000357475 CBX5P45973 191 aa20.79■□□□□ 0.92
SSBP3-202ENST00000357475 GNMTQ14749 295 aa20.79■□□□□ 0.92
SSBP3-202ENST00000357475 SRSF7Q16629 238 aaKnown RBP eCLIP20.79■□□□□ 0.92
SSBP3-202ENST00000357475 FAHD2BQ6P2I3 314 aaPredicted RBP20.79■□□□□ 0.92
SSBP3-202ENST00000357475 KIR3DL3Q8N743 410 aa20.79■□□□□ 0.92
SSBP3-202ENST00000357475 IL1F10Q8WWZ1 152 aa20.79■□□□□ 0.92
SSBP3-202ENST00000357475 LEAP2Q969E1 77 aa20.79■□□□□ 0.92
SSBP3-202ENST00000357475 FAHD2AQ96GK7 314 aa20.79■□□□□ 0.92
SSBP3-202ENST00000357475 TBX15Q96SF7 602 aa20.79■□□□□ 0.92
SSBP3-202ENST00000357475 THAP7Q9BT49 309 aaPredicted RBP20.79■□□□□ 0.92
SSBP3-202ENST00000357475 TMPRSS13Q9BYE2 586 aa20.79■□□□□ 0.92
SSBP3-202ENST00000357475 IDI2-AS1Q9NZ38 188 aa20.79■□□□□ 0.92
SSBP3-202ENST00000357475 ANXA10Q9UJ72 324 aa20.79■□□□□ 0.92
SSBP3-202ENST00000357475 TLN2Q9Y4G6 2542 aa20.79■□□□□ 0.92
SSBP3-202ENST00000357475 POM121CA8CG34 1229 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 RBBP9O75884 186 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 IGHV3-7P01780 117 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 IGHV1-8P0DP01 117 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 NAT1P18440 290 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 TRAT1Q6PIZ9 186 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 HEPN1Q6WQI6 88 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 VMO1Q7Z5L0 202 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 OR52L2PQ8NGH6 319 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 PCGF1Q9BSM1 259 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 OR1A1Q9P1Q5 309 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 ANK3Q12955 4377 aaKnown RBP20.78■□□□□ 0.92
SSBP3-202ENST00000357475 A0A1W2PPH5 198 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 M0R1W7 72 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 NFYBP25208 207 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 HLA-DMAP28067 261 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 LOXL3P58215 753 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 KLRD1Q13241 179 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 METTL11BQ5VVY1 283 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 OR10V1Q8NGI7 309 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 C7orf69Q9H7B7 122 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 KPTNQ9Y664 436 aa20.78■□□□□ 0.92
SSBP3-202ENST00000357475 F2RL2O00254 374 aa20.77■□□□□ 0.92
SSBP3-202ENST00000357475 SPINT2O43291 252 aa20.77■□□□□ 0.92
SSBP3-202ENST00000357475 TOX4O94842 621 aa20.77■□□□□ 0.92
SSBP3-202ENST00000357475 RCVRNP35243 200 aa20.77■□□□□ 0.92
SSBP3-202ENST00000357475 C1orf229Q6ZS94 237 aaPredicted RBP20.77■□□□□ 0.92
SSBP3-202ENST00000357475 ZNF554Q86TJ5 538 aa20.77■□□□□ 0.92
SSBP3-202ENST00000357475 GDPD1Q8N9F7 314 aa20.77■□□□□ 0.92
SSBP3-202ENST00000357475 TNFRSF14Q92956 283 aa20.77■□□□□ 0.92
SSBP3-202ENST00000357475 DMRTB1Q96MA1 342 aa20.77■□□□□ 0.92
SSBP3-202ENST00000357475 SUCNR1Q9BXA5 334 aa20.77■□□□□ 0.92
SSBP3-202ENST00000357475 MGAT4AQ9UM21 535 aa20.77■□□□□ 0.92
SSBP3-202ENST00000357475 SDCBPO00560 298 aaPredicted RBP20.76■□□□□ 0.91
SSBP3-202ENST00000357475 CD99P14209 185 aa20.76■□□□□ 0.91
SSBP3-202ENST00000357475 FPR2P25090 351 aa20.76■□□□□ 0.91
SSBP3-202ENST00000357475 KIR2DS4P43632 304 aa20.76■□□□□ 0.91
SSBP3-202ENST00000357475 ZNF846Q147U1 533 aa20.76■□□□□ 0.91
SSBP3-202ENST00000357475 KIR2DS1Q14954 304 aa20.76■□□□□ 0.91
SSBP3-202ENST00000357475 HCP5Q6MZN7 132 aa20.76■□□□□ 0.91
SSBP3-202ENST00000357475 OR4A4PQ8NGN8 299 aa20.76■□□□□ 0.91
SSBP3-202ENST00000357475 GALMQ96C23 342 aa20.76■□□□□ 0.91
SSBP3-202ENST00000357475 PARP12Q9H0J9 701 aaKnown RBP20.76■□□□□ 0.91
SSBP3-202ENST00000357475 CD5LO43866 347 aa20.75■□□□□ 0.91
SSBP3-202ENST00000357475 PMP2P02689 132 aa20.75■□□□□ 0.91
SSBP3-202ENST00000357475 PDZD9Q8IXQ8 264 aa20.75■□□□□ 0.91
SSBP3-202ENST00000357475 CABLES2Q9BTV7 478 aa20.75■□□□□ 0.91
SSBP3-202ENST00000357475 WDR12Q9GZL7 423 aaKnown RBP20.75■□□□□ 0.91
SSBP3-202ENST00000357475 METTL8Q9H825 291 aaKnown RBP20.75■□□□□ 0.91
SSBP3-202ENST00000357475 SLC23A1Q9UHI7 598 aa20.75■□□□□ 0.91
SSBP3-202ENST00000357475 SESN1Q9Y6P5 492 aa20.75■□□□□ 0.91
SSBP3-202ENST00000357475 BET1O15155 118 aa20.74■□□□□ 0.91
SSBP3-202ENST00000357475 RBP4P02753 201 aa20.74■□□□□ 0.91
SSBP3-202ENST00000357475 PRTN3P24158 256 aa20.74■□□□□ 0.91
SSBP3-202ENST00000357475 PPP1CCP36873 323 aaKnown RBP20.74■□□□□ 0.91
SSBP3-202ENST00000357475 RFX2P48378 723 aa20.74■□□□□ 0.91
SSBP3-202ENST00000357475 PPP5CP53041 499 aa20.74■□□□□ 0.91
SSBP3-202ENST00000357475 ACTBP60709 375 aa20.74■□□□□ 0.91
SSBP3-202ENST00000357475 ACTG1P63261 375 aa20.74■□□□□ 0.91
SSBP3-202ENST00000357475 OR4D10Q8NGI6 311 aa20.74■□□□□ 0.91
SSBP3-202ENST00000357475 TSC22D3Q99576 134 aa20.74■□□□□ 0.91
SSBP3-202ENST00000357475 OR2S2Q9NQN1 319 aa20.74■□□□□ 0.91
SSBP3-202ENST00000357475 GFOD1Q9NXC2 390 aa20.74■□□□□ 0.91
SSBP3-202ENST00000357475 ZNRD1Q9P1U0 126 aa20.74■□□□□ 0.91
SSBP3-202ENST00000357475 AUP1Q9Y679 476 aa20.74■□□□□ 0.91
SSBP3-202ENST00000357475 MAST4O15021 2626 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms